Update builder.yml #171
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| name: deploy-docker-singularity | |
| on: | |
| push: | |
| branches: | |
| - 'master' | |
| jobs: | |
| docker: | |
| name: Create Docker image and push to Dockerhub | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v2 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v2 | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| - name: Build and push to DockerHub | |
| id: docker_build | |
| uses: docker/build-push-action@v3 | |
| with: | |
| push: true | |
| tags: adamwilsonlab/emma:latest | |
| env: | |
| ACTIONS_RUNNER_DEBUG: true | |
| # Singularity section - uses the image pushed above | |
| # this is inefficient in that it pulls from dockerhub - maybe switch to use the local docker image? | |
| # singularity: | |
| # if: ${{ FALSE }} # use this to turn on singularity compilation as a release - but has to be <2GB for github. | |
| # name: Create Singularity .sif and save as release | |
| # needs: docker | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - name: Singularity - Checkout code | |
| # uses: actions/checkout@v2 | |
| # - name: Singularity - Get Latest Tag | |
| # run: | | |
| # # Get the latest tag, we won't build if it's the current | |
| # git fetch --tags | |
| # latest_tag=$(git tag | tail -1) | |
| # echo "latest_tag=$latest_tag" >> $GITHUB_ENV | |
| # - name: Singularity - Define Repository Name and Release Version | |
| # run: | | |
| # repo=$(echo "${GITHUB_REPOSITORY/\//-}") | |
| # release=$(cat VERSION) | |
| # echo "reponame=$repo" >> $GITHUB_ENV | |
| # echo "release_tag=$release" >> $GITHUB_ENV | |
| # - name: Singularity - Create Release | |
| # id: create_release | |
| # uses: actions/create-release@v1 | |
| # #if: ${{ env.release_tag != env.latest_tag }} | |
| # env: | |
| # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| # with: | |
| # tag_name: ${{ env.release_tag }} | |
| # release_name: emma ${{ env.release_tag }} | |
| # draft: false | |
| # prerelease: false | |
| # - uses: eWaterCycle/setup-singularity@v7 | |
| # #if: ${{ env.release_tag != env.latest_tag }} | |
| # with: | |
| # singularity-version: 3.8.3 | |
| # - name: Singularity - Build the container | |
| # #if: ${{ env.release_tag != env.latest_tag }} | |
| # run: | | |
| # repo=$(echo "${GITHUB_REPOSITORY/\//-}") | |
| # # For each Singularity* container, build based on the prefix (tag) | |
| # for recipe in $(ls Singularity*); do | |
| # echo "Building $recipe" | |
| # tag=$(echo "${recipe/Singularity\./}") | |
| # # If we find empty, use latest | |
| # if [ "$tag" == "Singularity" ]; then | |
| # tag=latest | |
| # fi | |
| # # Build the container and name by tag | |
| # echo "Tag is $tag." | |
| # container="$repo:$tag.sif" | |
| # container_zip="$repo-$tag.sif.zip" #add zip file name for compression later | |
| # singularity build --fakeroot container.sif "$recipe" | |
| # if [ "$?" == "0" ]; then | |
| # echo "Successfully built container $container." | |
| # mv container.sif "$container" | |
| # zip -9 ./"$container_zip" "$container" | |
| # else | |
| # echo "There was an issue building $container." | |
| # fi | |
| # done | |
| # - name: Singularity - Upload Release Assets | |
| # #if: ${{ env.release_tag != env.latest_tag }} | |
| # env: | |
| # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| # upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| # tag_name: ${{ env.release_tag }} | |
| # run: | | |
| # # select zip option below if sif is >2GB and can't fit as github release | |
| # #hub release edit $(find . -type f -name "*.sif" -printf "-a %p ") -m "" "$tag_name" | |
| # hub release edit $(find . -type f -name "*.sif.zip" -printf "-a %p ") -m "" "$tag_name" |