From 6ec6848be4f7ae28a9209f41a35a980ebd4fc313 Mon Sep 17 00:00:00 2001 From: Julie Dixon Date: Thu, 1 May 2025 11:14:53 -0700 Subject: [PATCH 1/3] Update manuscript referencing --- README.md | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index b71998a5..31a4ebee 100644 --- a/README.md +++ b/README.md @@ -1,8 +1,7 @@ # Colony context and size-dependent compensation mechanisms give rise to variations in nuclear growth trajectories -The `dev` branch reflects the most up to date version of this analysis. To exactly reproduce the analysis as seen in bioRxiv manuscript use the `bioRxiv-v1` branch. - -The code in this repository generates all of the figures for Dixon et al. 2024 [(bioRxiv)](https://www.biorxiv.org/content/10.1101/2024.06.28.601071v1). It is primarily intended to support reproducibility of our research. In addition, researchers may find parts of this code valuable for future work. +The code in this repository generates all of the figures for [Dixon et al 2025](https://www.cell.com/cell-systems/fulltext/S2405-4712(25)00098-5). It is primarily intended to support reproducibility of our research. In addition, researchers may find parts of this code valuable for future work. +The `dev` branch reflects the most up to date version of this analysis. To exactly reproduce the analysis as seen in the [(bioRxiv)](https://www.biorxiv.org/content/10.1101/2024.06.28.601071v1) version of the manuscript use the `bioRxiv-v1` branch. For a description of the cell treatments, imaging, and the purpose of each analysis, please refer to the paper. From c13af44b6a78547a2a25d66cd92d08767f02b2c3 Mon Sep 17 00:00:00 2001 From: Julie Dixon Date: Thu, 1 May 2025 11:15:37 -0700 Subject: [PATCH 2/3] fix parentheses on biorxiv --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 31a4ebee..d373a04b 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ # Colony context and size-dependent compensation mechanisms give rise to variations in nuclear growth trajectories The code in this repository generates all of the figures for [Dixon et al 2025](https://www.cell.com/cell-systems/fulltext/S2405-4712(25)00098-5). It is primarily intended to support reproducibility of our research. In addition, researchers may find parts of this code valuable for future work. -The `dev` branch reflects the most up to date version of this analysis. To exactly reproduce the analysis as seen in the [(bioRxiv)](https://www.biorxiv.org/content/10.1101/2024.06.28.601071v1) version of the manuscript use the `bioRxiv-v1` branch. +The `dev` branch reflects the most up to date version of this analysis. To exactly reproduce the analysis as seen in the [bioRxiv](https://www.biorxiv.org/content/10.1101/2024.06.28.601071v1) version of the manuscript use the `bioRxiv-v1` branch. For a description of the cell treatments, imaging, and the purpose of each analysis, please refer to the paper. From be79aa4cbc6041989d8509f2f1ace6ecb7bd9d7a Mon Sep 17 00:00:00 2001 From: Julie Dixon Date: Thu, 1 May 2025 13:43:52 -0700 Subject: [PATCH 3/3] use doi link instead --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index d373a04b..e89ba322 100644 --- a/README.md +++ b/README.md @@ -1,5 +1,5 @@ # Colony context and size-dependent compensation mechanisms give rise to variations in nuclear growth trajectories -The code in this repository generates all of the figures for [Dixon et al 2025](https://www.cell.com/cell-systems/fulltext/S2405-4712(25)00098-5). It is primarily intended to support reproducibility of our research. In addition, researchers may find parts of this code valuable for future work. +The code in this repository generates all of the figures for [Dixon et al 2025](https://doi.org/10.1016/j.cels.2025.101265). It is primarily intended to support reproducibility of our research. In addition, researchers may find parts of this code valuable for future work. The `dev` branch reflects the most up to date version of this analysis. To exactly reproduce the analysis as seen in the [bioRxiv](https://www.biorxiv.org/content/10.1101/2024.06.28.601071v1) version of the manuscript use the `bioRxiv-v1` branch.