🐣 initial commit

Author: TanyaS08

code/02_Topology.jl

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+#=
+-------------------------------------------------
+02_Topology.jl
+Calculating structure/topology for generated networks.
+-------------------------------------------------
+
+=#
+# Load the Pkg package manager.
+using Pkg
+# Activate the current project environment to ensure consistent package versions.
+Pkg.activate(".")
+
+# --- 1. Load Dependencies ---
+using DataFrames
+using JLD2            # For saving the full data with matrices
+using SpeciesInteractionNetworks   # For Uniform, LogUniform distributions
+
+# --- 2. Load All Code ---
+
+# --- 3. Import networks .jld2 object ---
+
+networks = load_object("data/outputs/network_test_verified_seed_42_29-10-2025.jld2")
+
+# --- 4. Convert networks to `SpeciesInteractionNetworks` networks ---
+
+S = networks.S[1]
+
+spp_list = Symbol.([0:1:10])
+
+networks.AdjacencyMatrix[1]