CI and version string bump for v0.5.1 (#149)

* include testing on newer python versions

* bump version string

* linting: remove print statements from tests

* fix: improve robustness of  and add a test #141

* fix: add init to test data module

* fix: add init to remaining test data modules

* tests: add tests with github actions

* tests: add tests with github actions

* tests: rename build job

* update changelog

---------

Co-authored-by: Arian Jamasb <[email protected]>

Author: a-r-j

.appveyor.yml

@@ -4,6 +4,15 @@ environment:
   matrix:
     - PYTHON_VERSION: 3.7
       MINICONDA: C:\Miniconda3
+    - PYTHON_VERSION: 3.8
+      MINICONDA: C:\Miniconda3
+    - PYTHON_VERSION: 3.9
+      MINICONDA: C:\Miniconda3
+    - PYTHON_VERSION: "3.10"
+      MINICONDA: C:\Miniconda3
+    - PYTHON_VERSION: 3.11
+      MINICONDA: C:\Miniconda3
+
 
 init:
   - ECHO %PYTHON_VERSION% %MINICONDA%

.github/workflows/tests.yaml

@@ -0,0 +1,44 @@
+name: tests
+
+on:
+  push:
+    paths-ignore:
+      - "README.md"
+      - "docs/**"
+      - "CHANGELOG.md"
+
+  pull_request:
+    paths-ignore:
+      - "README.md"
+      - "docs/*"
+      - "CHANGELOG.md"
+
+jobs:
+  build_biopandas:
+    runs-on: ubuntu-latest
+    # https://github.com/marketplace/actions/setup-miniconda#use-a-default-shell
+    defaults:
+      run:
+        shell: bash -l {0}
+
+    strategy:
+      matrix:
+        python-version: [3.7, 3.8, 3.9, "3.10", 3.11]
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+        # See: https://github.com/marketplace/actions/setup-miniconda
+      - name: Setup miniconda
+        uses: conda-incubator/setup-miniconda@v2
+        with:
+          auto-update-conda: true
+          miniforge-variant: Mambaforge
+          conda-channels: conda-forge
+          python-version: ${{ matrix.python-version }}
+          use-mamba: true
+      - name: Install BioPandas
+        run: pip install -e .
+      - name: Install Dev Dependencies
+        run: pip install mmtf-python numpy scipy pandas pytest looseversion importlib_resources
+      - name: Run unit tests and generate coverage report
+        run: pytest -s -v

biopandas/__init__.py

@@ -24,5 +24,5 @@
 # 'X.Y.dev0' is the canonical version of 'X.Y.dev'
 #
 
-__version__ = "0.5.1dev"
+__version__ = "0.5.1"
 __author__ = "Sebastian Raschka <[email protected]>"