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The src directory includes local and external input data used in the analyses.

File/Directory Name Description Source Comments
parcellations/*h.schaefer-*.annot Schaefer-N parcellation in fsaverage5 space ThomasYeoLab / CBIG Originally named *h.Schaefer2018_*Parcels_7Networks_order.annot
parcellations/*h.schaefer-*.fsa.annot Schaefer-N parcellation in fsaverage space ThomasYeoLab / CBIG Originally named *h.Schaefer2018_*Parcels_7Networks_order.annot
parcellations/lut_*_mics.csv Parcel infos from micapipe MICA-MNI / micapipe Cortical parcels are renamed to match FC parcel names
parcellations/tpl-MNI152_desc-schaefer-*_parcellation_1mm.nii.gz Schaefer-N parcellation in MNI152 space ThomasYeoLab / CBIG Originally named Schaefer2018_*Parcels_7Networks_order_FSLMNI152_1mm.nii.gz
parcellations/Schaefer2018_*Parcels_7Networks_order.dlabel.nii Schaefer-N parcellation in fsLR space ThomasYeoLab / CBIG
parcellations/Schaefer2018_*Parcels_7Networks_order.txt Schaefer-N parcellation labels ThomasYeoLab / CBIG
fsaverage_*h.pial_semi_inflated Semi-inflated fsaverage mesh Freesurfer 7.4
PET_nifti_images PET images of NMDA and GABA_A/BZ receptors netneurolab / hansen_receptors
tpl-fs_LR_hemi-L_den-32k_desc-LTC_G1.shape.gii Laminar thickness covariance G1 in fsLR space amnsbr / laminar_organization
ahba_parc-schaefer100_hemi-L_ibf_threshold-0.5_missing-centroids.npz AHBA gene expression data of Schaefer-100 parcels in left hemisphere amnsbr / laminar_organization