diff --git a/experiments/ClimaCore/Manifest-v1.11.toml b/experiments/ClimaCore/Manifest-v1.11.toml index b51dff7414..a8b73e23c4 100644 --- a/experiments/ClimaCore/Manifest-v1.11.toml +++ b/experiments/ClimaCore/Manifest-v1.11.toml @@ -367,9 +367,9 @@ version = "0.5.20" [[deps.ClimaAtmos]] deps = ["Adapt", "ArgParse", "Artifacts", "AtmosphericProfilesLibrary", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaInterpolations", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "CloudMicrophysics", "Dates", "Flux", "ForwardDiff", "Insolation", "Interpolations", "JLD2", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "NullBroadcasts", "RRTMGP", "Random", "SciMLBase", "SparseMatrixColorings", "StaticArrays", "Statistics", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities", "YAML"] -git-tree-sha1 = "6aad3605b30d9761d6035b632eb48a9f3637ad07" +git-tree-sha1 = "69332bb7b1c2d4d1809fecaba8f6a1abdb774984" uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717" -version = "0.35.0" +version = "0.35.1" [[deps.ClimaComms]] deps = ["Adapt", "Logging", "LoggingExtras"] @@ -386,10 +386,10 @@ version = "0.6.10" MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] -git-tree-sha1 = "2bc97b5658ac6888626dca1886de28d4f3d282b2" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "ClimaInterpolations", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] +git-tree-sha1 = "d1a4bb160a773dcd7fa392bf0c9625409ba38e54" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.14.48" +version = "0.14.49" [deps.ClimaCore.extensions] ClimaCoreCUDAExt = "CUDA" @@ -431,10 +431,10 @@ version = "0.1.2" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.ClimaDiagnostics]] -deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "OrderedCollections", "SciMLBase"] -git-tree-sha1 = "5c031f4fc0c044e3da65c7cbc173962cc1489074" +deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "NVTX", "OrderedCollections", "SciMLBase"] +git-tree-sha1 = "34afaa11e04d6d4f746b0d03cdbc83b543f77302" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.15" +version = "0.3.2" [[deps.ClimaInterpolations]] deps = ["DocStringExtensions"] @@ -450,9 +450,9 @@ version = "0.1.1" [[deps.ClimaParams]] deps = ["Dates", "TOML"] -git-tree-sha1 = "4a5c44b9413abf740709177368a282409b123105" +git-tree-sha1 = "5bd9de756aa2de036a225f0a65476edcad1c0d6d" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "1.0.10" +version = "1.0.11" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -1146,9 +1146,9 @@ version = "0.1.0" [[deps.Glib_jll]] deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "6b4d2dc81736fe3980ff0e8879a9fc7c33c44ddf" +git-tree-sha1 = "24f6def62397474a297bfcec22384101609142ed" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.86.2+0" +version = "2.86.3+0" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -1571,9 +1571,9 @@ version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3acf07f130a76f87c041cfb2ff7d7284ca67b072" +git-tree-sha1 = "97bbca976196f2a1eb9607131cb108c69ec3f8a6" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] @@ -1583,9 +1583,9 @@ version = "4.7.2+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "2a7a12fc0a4e7fb773450d17975322aa77142106" +git-tree-sha1 = "d0205286d9eceadc518742860bf23f703779a3d6" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] @@ -1593,10 +1593,10 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" version = "1.11.0" [[deps.LinearOperators]] -deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda" +deps = ["FastClosures", "LinearAlgebra", "Printf", "SparseArrays", "TimerOutputs"] +git-tree-sha1 = "80f975f228586a745c8716ff3aa33715fe9ee188" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" -version = "2.11.0" +version = "2.12.0" [deps.LinearOperators.extensions] LinearOperatorsAMDGPUExt = "AMDGPU" @@ -2753,9 +2753,9 @@ version = "1.0.2" [[deps.Thermodynamics]] deps = ["ForwardDiff", "Random", "RootSolvers"] -git-tree-sha1 = "3958121b3ed912e0858960b682de6e98cb4949dd" +git-tree-sha1 = "2983a61f8fe7e03957efea2b32b2f2c446b4a099" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.15.7" +version = "0.15.8" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions] diff --git a/experiments/ClimaCore/Manifest.toml b/experiments/ClimaCore/Manifest.toml index 263a517781..ab84553bf2 100644 --- a/experiments/ClimaCore/Manifest.toml +++ b/experiments/ClimaCore/Manifest.toml @@ -364,9 +364,9 @@ version = "0.5.20" [[deps.ClimaAtmos]] deps = ["Adapt", "ArgParse", "Artifacts", "AtmosphericProfilesLibrary", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaInterpolations", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "CloudMicrophysics", "Dates", "Flux", "ForwardDiff", "Insolation", "Interpolations", "JLD2", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "NullBroadcasts", "RRTMGP", "Random", "SciMLBase", "SparseMatrixColorings", "StaticArrays", "Statistics", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities", "YAML"] -git-tree-sha1 = "6aad3605b30d9761d6035b632eb48a9f3637ad07" +git-tree-sha1 = "69332bb7b1c2d4d1809fecaba8f6a1abdb774984" uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717" -version = "0.35.0" +version = "0.35.1" [[deps.ClimaComms]] deps = ["Adapt", "Logging", "LoggingExtras"] @@ -383,10 +383,10 @@ version = "0.6.10" MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] -git-tree-sha1 = "2bc97b5658ac6888626dca1886de28d4f3d282b2" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "ClimaInterpolations", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] +git-tree-sha1 = "d1a4bb160a773dcd7fa392bf0c9625409ba38e54" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.14.48" +version = "0.14.49" [deps.ClimaCore.extensions] ClimaCoreCUDAExt = "CUDA" @@ -428,10 +428,10 @@ version = "0.1.2" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.ClimaDiagnostics]] -deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "OrderedCollections", "SciMLBase"] -git-tree-sha1 = "5c031f4fc0c044e3da65c7cbc173962cc1489074" +deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "NVTX", "OrderedCollections", "SciMLBase"] +git-tree-sha1 = "34afaa11e04d6d4f746b0d03cdbc83b543f77302" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.15" +version = "0.3.2" [[deps.ClimaInterpolations]] deps = ["DocStringExtensions"] @@ -447,9 +447,9 @@ version = "0.1.1" [[deps.ClimaParams]] deps = ["Dates", "TOML"] -git-tree-sha1 = "4a5c44b9413abf740709177368a282409b123105" +git-tree-sha1 = "5bd9de756aa2de036a225f0a65476edcad1c0d6d" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "1.0.10" +version = "1.0.11" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -1141,9 +1141,9 @@ version = "0.1.0" [[deps.Glib_jll]] deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "6b4d2dc81736fe3980ff0e8879a9fc7c33c44ddf" +git-tree-sha1 = "24f6def62397474a297bfcec22384101609142ed" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.86.2+0" +version = "2.86.3+0" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -1562,9 +1562,9 @@ version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3acf07f130a76f87c041cfb2ff7d7284ca67b072" +git-tree-sha1 = "97bbca976196f2a1eb9607131cb108c69ec3f8a6" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] @@ -1574,19 +1574,19 @@ version = "4.7.2+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "2a7a12fc0a4e7fb773450d17975322aa77142106" +git-tree-sha1 = "d0205286d9eceadc518742860bf23f703779a3d6" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.LinearAlgebra]] deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearOperators]] -deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda" +deps = ["FastClosures", "LinearAlgebra", "Printf", "SparseArrays", "TimerOutputs"] +git-tree-sha1 = "80f975f228586a745c8716ff3aa33715fe9ee188" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" -version = "2.11.0" +version = "2.12.0" [deps.LinearOperators.extensions] LinearOperatorsAMDGPUExt = "AMDGPU" @@ -2720,9 +2720,9 @@ version = "1.0.2" [[deps.Thermodynamics]] deps = ["ForwardDiff", "Random", "RootSolvers"] -git-tree-sha1 = "3958121b3ed912e0858960b682de6e98cb4949dd" +git-tree-sha1 = "2983a61f8fe7e03957efea2b32b2f2c446b4a099" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.15.7" +version = "0.15.8" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions] diff --git a/experiments/ClimaEarth/Manifest-v1.11.toml b/experiments/ClimaEarth/Manifest-v1.11.toml index 9112bde6ed..dec0209cef 100644 --- a/experiments/ClimaEarth/Manifest-v1.11.toml +++ b/experiments/ClimaEarth/Manifest-v1.11.toml @@ -208,9 +208,9 @@ version = "0.4.8" [[deps.BFloat16s]] deps = ["LinearAlgebra", "Printf", "Random"] -git-tree-sha1 = "3b642331600250f592719140c60cf12372b82d66" +git-tree-sha1 = "e386db8b4753b42caac75ac81d0a4fe161a68a97" uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" -version = "0.5.1" +version = "0.6.1" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] @@ -336,10 +336,10 @@ uuid = "4e9b3aee-d8a1-5a3d-ad8b-7d824db253f0" version = "1.0.1+0" [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Compiler_jll", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "GPUToolbox", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "demumble_jll"] -git-tree-sha1 = "224c078c40f7cbd98f393d1722953f3a7f24a3ca" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Compiler_jll", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "GPUToolbox", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "SparseArrays", "StaticArrays", "Statistics", "demumble_jll"] +git-tree-sha1 = "3fe1fb600b6ec029697416d5851ef0661c538f20" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.8.5" +version = "5.9.6" [deps.CUDA.extensions] ChainRulesCoreExt = "ChainRulesCore" @@ -355,9 +355,9 @@ version = "5.8.5" [[deps.CUDA_Compiler_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "CUDA_Runtime_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "68bac021c5d511fe39c2f4306cc9623a6626dbb4" +git-tree-sha1 = "e547b2202721853ec06c6d9a71c87426419ba765" uuid = "d1e2174e-dfdc-576e-b43e-73b79eb1aca8" -version = "0.2.2+0" +version = "0.4.1+1" [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -447,9 +447,9 @@ weakdeps = ["GeoMakie", "Makie"] [[deps.ClimaAtmos]] deps = ["Adapt", "ArgParse", "Artifacts", "AtmosphericProfilesLibrary", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaInterpolations", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "CloudMicrophysics", "Dates", "Flux", "ForwardDiff", "Insolation", "Interpolations", "JLD2", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "NullBroadcasts", "RRTMGP", "Random", "SciMLBase", "SparseMatrixColorings", "StaticArrays", "Statistics", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities", "YAML"] -git-tree-sha1 = "6aad3605b30d9761d6035b632eb48a9f3637ad07" +git-tree-sha1 = "69332bb7b1c2d4d1809fecaba8f6a1abdb774984" uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717" -version = "0.35.0" +version = "0.35.1" [[deps.ClimaCalibrate]] deps = ["Dates", "Distributed", "Distributions", "EnsembleKalmanProcesses", "JLD2", "Logging", "Random", "TOML", "YAML"] @@ -480,10 +480,10 @@ weakdeps = ["CUDA", "MPI"] ClimaCommsMPIExt = "MPI" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] -git-tree-sha1 = "2bc97b5658ac6888626dca1886de28d4f3d282b2" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "ClimaInterpolations", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] +git-tree-sha1 = "d1a4bb160a773dcd7fa392bf0c9625409ba38e54" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.14.48" +version = "0.14.49" weakdeps = ["CUDA", "GPUCompiler", "Krylov"] [deps.ClimaCore.extensions] @@ -509,10 +509,10 @@ weakdeps = ["CairoMakie", "ClimaCoreMakie", "ClimaOcean", "ClimaSeaIce", "GeoMak ClimaCouplerOceananigansMakieExt = ["CairoMakie", "ClimaCoreMakie", "GeoMakie", "Makie", "Oceananigans", "Poppler_jll", "Printf"] [[deps.ClimaDiagnostics]] -deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "OrderedCollections", "SciMLBase"] -git-tree-sha1 = "5c031f4fc0c044e3da65c7cbc173962cc1489074" +deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "NVTX", "OrderedCollections", "SciMLBase"] +git-tree-sha1 = "34afaa11e04d6d4f746b0d03cdbc83b543f77302" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.15" +version = "0.3.2" [[deps.ClimaInterpolations]] deps = ["DocStringExtensions"] @@ -526,9 +526,9 @@ weakdeps = ["CUDA"] [[deps.ClimaLand]] deps = ["Adapt", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "Dates", "DocStringExtensions", "Insolation", "Interpolations", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "NCDatasets", "RootSolvers", "SciMLBase", "StaticArrays", "SurfaceFluxes", "Thermodynamics"] -git-tree-sha1 = "5d82b740e55f52b740b1e1b2dfd7829069868ce1" +git-tree-sha1 = "1eb4a7268471d4a6c06ebfa434d530c8d003be0d" uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "1.5.2" +version = "1.5.3" [deps.ClimaLand.extensions] FluxnetSimulationsExt = ["DelimitedFiles"] @@ -567,21 +567,21 @@ version = "0.9.0" [[deps.ClimaParams]] deps = ["Dates", "TOML"] -git-tree-sha1 = "4a5c44b9413abf740709177368a282409b123105" +git-tree-sha1 = "5bd9de756aa2de036a225f0a65476edcad1c0d6d" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "1.0.10" +version = "1.0.11" [[deps.ClimaSeaIce]] deps = ["Adapt", "JLD2", "KernelAbstractions", "Oceananigans", "RootSolvers", "Roots", "SeawaterPolynomials"] -git-tree-sha1 = "d28023521a2d1b2a2f21e750adb6991547b33180" +git-tree-sha1 = "99f9a19c1512d89984fcfa00d7d4f17a69bd2cda" uuid = "6ba0ff68-24e6-4315-936c-2e99227c95a4" -version = "0.4.2" +version = "0.4.3" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "23c8346606e165aa8805f25063f24e39bd8e148d" +git-tree-sha1 = "4ccf3dcc43dfce0d5c0e437dc432b5b20233e2fa" uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79" -version = "0.8.5" +version = "0.8.6" weakdeps = ["BenchmarkTools", "CUDA", "OrderedCollections", "PrettyTables", "StatsBase"] [deps.ClimaTimeSteppers.extensions] @@ -1343,9 +1343,9 @@ version = "1.7.5" [[deps.GPUToolbox]] deps = ["LLVM"] -git-tree-sha1 = "5bfe837129bf49e2e049b4f1517546055cc16a93" +git-tree-sha1 = "9e9186b09a13b7f094f87d1a9bb266d8780e1b1c" uuid = "096a3bc2-3ced-46d0-87f4-dd12716f4bfc" -version = "0.3.0" +version = "1.0.0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -1455,9 +1455,9 @@ version = "0.1.0" [[deps.Glib_jll]] deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "6b4d2dc81736fe3980ff0e8879a9fc7c33c44ddf" +git-tree-sha1 = "24f6def62397474a297bfcec22384101609142ed" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.86.2+0" +version = "2.86.3+0" [[deps.Glob]] git-tree-sha1 = "83cb0092e2792b9e3a865b6655e88f5b862607e2" @@ -1970,9 +1970,9 @@ version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3acf07f130a76f87c041cfb2ff7d7284ca67b072" +git-tree-sha1 = "97bbca976196f2a1eb9607131cb108c69ec3f8a6" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] @@ -1982,9 +1982,9 @@ version = "4.7.2+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "2a7a12fc0a4e7fb773450d17975322aa77142106" +git-tree-sha1 = "d0205286d9eceadc518742860bf23f703779a3d6" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Printf"] @@ -1998,10 +1998,10 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" version = "1.11.0" [[deps.LinearOperators]] -deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda" +deps = ["FastClosures", "LinearAlgebra", "Printf", "SparseArrays", "TimerOutputs"] +git-tree-sha1 = "80f975f228586a745c8716ff3aa33715fe9ee188" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" -version = "2.11.0" +version = "2.12.0" [deps.LinearOperators.extensions] LinearOperatorsAMDGPUExt = "AMDGPU" @@ -2403,9 +2403,9 @@ version = "0.1.0" [[deps.NearestNeighbors]] deps = ["AbstractTrees", "Distances", "StaticArrays"] -git-tree-sha1 = "2949f294f82b5ad7192fd544a988a1e785438ee2" +git-tree-sha1 = "e2c3bba08dd6dedfe17a17889131b885b8c082f0" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.26" +version = "0.4.27" [[deps.NetCDF_jll]] deps = ["Artifacts", "Blosc_jll", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "TOML", "XML2_jll", "Zlib_jll", "Zstd_jll", "libaec_jll", "libzip_jll"] @@ -2435,12 +2435,12 @@ version = "0.5.5" [[deps.Oceananigans]] deps = ["Adapt", "Crayons", "CubedSphere", "Dates", "Distances", "DocStringExtensions", "FFTW", "GPUArraysCore", "Glob", "InteractiveUtils", "JLD2", "KernelAbstractions", "Krylov", "LinearAlgebra", "Logging", "MPI", "MuladdMacro", "OffsetArrays", "OrderedCollections", "Pkg", "Printf", "ReactantCore", "Rotations", "SeawaterPolynomials", "SparseArrays", "StaticArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "50180d492979bd70b9dc093eaf3872661e7220b9" +git-tree-sha1 = "71904792851641c88c96ae20f1960615c21cf15c" uuid = "9e8cae18-63c1-5223-a75c-80ca9d6e9a09" -version = "0.104.2" +version = "0.104.3" [deps.Oceananigans.extensions] - OceananigansAMDGPUExt = "AMDGPU" + OceananigansAMDGPUExt = ["AMDGPU", "AbstractFFTs"] OceananigansCUDAExt = ["CUDA", "GPUArrays", "GPUArraysCore"] OceananigansEnzymeExt = "Enzyme" OceananigansMakieExt = "Makie" @@ -2452,6 +2452,7 @@ version = "0.104.2" [deps.Oceananigans.weakdeps] AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" + AbstractFFTs = "621f4979-c628-5d54-868e-fcf4e3e8185c" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" ConstructionBase = "187b0558-2788-49d3-abe0-74a17ed4e7c9" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" @@ -2550,9 +2551,9 @@ version = "0.5.6+0" [[deps.Optim]] deps = ["ADTypes", "EnumX", "FillArrays", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "PositiveFactorizations", "Printf", "SparseArrays", "Statistics"] -git-tree-sha1 = "e4f98846b70ef55e111ac8c40add135256c0cc47" +git-tree-sha1 = "7957b66b4e80f1031417197099f35273f7dd93dd" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "2.0.0" +version = "2.0.1" weakdeps = ["MathOptInterface"] [deps.Optim.extensions] @@ -2608,9 +2609,9 @@ version = "0.4.4" [[deps.PROJ_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "Libtiff_jll", "SQLite_jll"] -git-tree-sha1 = "817778f5802156bff35b472c73b0c4e611bd23c3" +git-tree-sha1 = "af57004c3b686097d563f9c394d7886431a38c75" uuid = "58948b4f-47e0-5654-a9ad-f609743f8632" -version = "902.700.0+0" +version = "902.700.100+0" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -2744,10 +2745,10 @@ uuid = "8162dcfd-2161-5ef2-ae6c-7681170c5f98" version = "0.2.0" [[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "1101cd475833706e4d0e7b122218257178f48f34" +deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "REPL", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "c5a07210bd060d6a8491b0ccdee2fa0235fc00bf" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.4.0" +version = "3.1.2" [[deps.Primes]] deps = ["IntegerMathUtils"] @@ -2943,9 +2944,9 @@ version = "0.5.1+0" [[deps.RootSolvers]] deps = ["ForwardDiff", "Printf"] -git-tree-sha1 = "769388dbf7656e70f6ee250f35bb6cbca8f43203" +git-tree-sha1 = "3b6c0089c3dc3d5780786d5007e976fe9d1b7887" uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74" -version = "0.4.6" +version = "1.0.2" [[deps.Roots]] deps = ["Accessors", "CommonSolve", "Printf"] @@ -2992,9 +2993,9 @@ version = "0.5.17" [[deps.SCS]] deps = ["LinearAlgebra", "MathOptInterface", "OpenBLAS32_jll", "PrecompileTools", "SCS_jll", "SparseArrays"] -git-tree-sha1 = "96cfe159e1989c07e5a35d1cb5a1a12175bd6192" +git-tree-sha1 = "cfc9973a2fd1089fbd6c02b324f4ef189f9697e6" uuid = "c946c3f1-0d1f-5ce8-9dea-7daa1f7e2d13" -version = "2.6.0" +version = "2.6.1" [deps.SCS.extensions] SCSSCS_GPU_jllExt = ["SCS_GPU_jll"] @@ -3404,9 +3405,9 @@ weakdeps = ["ClimaParams"] [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "b19cf024a2b11d72bef7c74ac3d1cbe86ec9e4ed" +git-tree-sha1 = "94c58884e013efff548002e8dc2fdd1cb74dfce5" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.44" +version = "0.3.46" weakdeps = ["PrettyTables"] [deps.SymbolicIndexingInterface.extensions] @@ -3465,9 +3466,9 @@ version = "1.0.2" [[deps.Thermodynamics]] deps = ["ForwardDiff", "Random", "RootSolvers"] -git-tree-sha1 = "3958121b3ed912e0858960b682de6e98cb4949dd" +git-tree-sha1 = "2983a61f8fe7e03957efea2b32b2f2c446b4a099" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.15.7" +version = "0.15.8" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions] diff --git a/experiments/ClimaEarth/Manifest.toml b/experiments/ClimaEarth/Manifest.toml index cbb40f443e..4c6e465626 100644 --- a/experiments/ClimaEarth/Manifest.toml +++ b/experiments/ClimaEarth/Manifest.toml @@ -207,9 +207,9 @@ version = "0.4.8" [[deps.BFloat16s]] deps = ["LinearAlgebra", "Printf", "Random"] -git-tree-sha1 = "3b642331600250f592719140c60cf12372b82d66" +git-tree-sha1 = "e386db8b4753b42caac75ac81d0a4fe161a68a97" uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" -version = "0.5.1" +version = "0.6.1" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] @@ -333,10 +333,10 @@ uuid = "4e9b3aee-d8a1-5a3d-ad8b-7d824db253f0" version = "1.0.1+0" [[deps.CUDA]] -deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Compiler_jll", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "GPUToolbox", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "demumble_jll"] -git-tree-sha1 = "224c078c40f7cbd98f393d1722953f3a7f24a3ca" +deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Compiler_jll", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "GPUToolbox", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "SparseArrays", "StaticArrays", "Statistics", "demumble_jll"] +git-tree-sha1 = "3fe1fb600b6ec029697416d5851ef0661c538f20" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.8.5" +version = "5.9.6" [deps.CUDA.extensions] ChainRulesCoreExt = "ChainRulesCore" @@ -352,9 +352,9 @@ version = "5.8.5" [[deps.CUDA_Compiler_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "CUDA_Runtime_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "68bac021c5d511fe39c2f4306cc9623a6626dbb4" +git-tree-sha1 = "e547b2202721853ec06c6d9a71c87426419ba765" uuid = "d1e2174e-dfdc-576e-b43e-73b79eb1aca8" -version = "0.2.2+0" +version = "0.4.1+1" [[deps.CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -444,9 +444,9 @@ weakdeps = ["GeoMakie", "Makie"] [[deps.ClimaAtmos]] deps = ["Adapt", "ArgParse", "Artifacts", "AtmosphericProfilesLibrary", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaInterpolations", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "CloudMicrophysics", "Dates", "Flux", "ForwardDiff", "Insolation", "Interpolations", "JLD2", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "Logging", "NCDatasets", "NVTX", "NullBroadcasts", "RRTMGP", "Random", "SciMLBase", "SparseMatrixColorings", "StaticArrays", "Statistics", "SurfaceFluxes", "Thermodynamics", "UnrolledUtilities", "YAML"] -git-tree-sha1 = "6aad3605b30d9761d6035b632eb48a9f3637ad07" +git-tree-sha1 = "69332bb7b1c2d4d1809fecaba8f6a1abdb774984" uuid = "b2c96348-7fb7-4fe0-8da9-78d88439e717" -version = "0.35.0" +version = "0.35.1" [[deps.ClimaCalibrate]] deps = ["Dates", "Distributed", "Distributions", "EnsembleKalmanProcesses", "JLD2", "Logging", "Random", "TOML", "YAML"] @@ -477,10 +477,10 @@ weakdeps = ["CUDA", "MPI"] ClimaCommsMPIExt = "MPI" [[deps.ClimaCore]] -deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] -git-tree-sha1 = "2bc97b5658ac6888626dca1886de28d4f3d282b2" +deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "ClimaInterpolations", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LazyBroadcast", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "UnrolledUtilities"] +git-tree-sha1 = "d1a4bb160a773dcd7fa392bf0c9625409ba38e54" uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.14.48" +version = "0.14.49" weakdeps = ["CUDA", "GPUCompiler", "Krylov"] [deps.ClimaCore.extensions] @@ -506,10 +506,10 @@ weakdeps = ["CairoMakie", "ClimaCoreMakie", "ClimaOcean", "ClimaSeaIce", "GeoMak ClimaCouplerOceananigansMakieExt = ["CairoMakie", "ClimaCoreMakie", "GeoMakie", "Makie", "Oceananigans", "Poppler_jll", "Printf"] [[deps.ClimaDiagnostics]] -deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "OrderedCollections", "SciMLBase"] -git-tree-sha1 = "5c031f4fc0c044e3da65c7cbc173962cc1489074" +deps = ["Accessors", "ClimaComms", "ClimaCore", "ClimaUtilities", "Dates", "NCDatasets", "NVTX", "OrderedCollections", "SciMLBase"] +git-tree-sha1 = "34afaa11e04d6d4f746b0d03cdbc83b543f77302" uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f" -version = "0.2.15" +version = "0.3.2" [[deps.ClimaInterpolations]] deps = ["DocStringExtensions"] @@ -523,9 +523,9 @@ weakdeps = ["CUDA"] [[deps.ClimaLand]] deps = ["Adapt", "ClimaComms", "ClimaCore", "ClimaDiagnostics", "ClimaParams", "ClimaTimeSteppers", "ClimaUtilities", "Dates", "DocStringExtensions", "Insolation", "Interpolations", "LazyArtifacts", "LazyBroadcast", "LinearAlgebra", "NCDatasets", "RootSolvers", "SciMLBase", "StaticArrays", "SurfaceFluxes", "Thermodynamics"] -git-tree-sha1 = "5d82b740e55f52b740b1e1b2dfd7829069868ce1" +git-tree-sha1 = "1eb4a7268471d4a6c06ebfa434d530c8d003be0d" uuid = "08f4d4ce-cf43-44bb-ad95-9d2d5f413532" -version = "1.5.2" +version = "1.5.3" [deps.ClimaLand.extensions] FluxnetSimulationsExt = ["DelimitedFiles"] @@ -564,21 +564,21 @@ version = "0.9.0" [[deps.ClimaParams]] deps = ["Dates", "TOML"] -git-tree-sha1 = "4a5c44b9413abf740709177368a282409b123105" +git-tree-sha1 = "5bd9de756aa2de036a225f0a65476edcad1c0d6d" uuid = "5c42b081-d73a-476f-9059-fd94b934656c" -version = "1.0.10" +version = "1.0.11" [[deps.ClimaSeaIce]] deps = ["Adapt", "JLD2", "KernelAbstractions", "Oceananigans", "RootSolvers", "Roots", "SeawaterPolynomials"] -git-tree-sha1 = "d28023521a2d1b2a2f21e750adb6991547b33180" +git-tree-sha1 = "99f9a19c1512d89984fcfa00d7d4f17a69bd2cda" uuid = "6ba0ff68-24e6-4315-936c-2e99227c95a4" -version = "0.4.2" +version = "0.4.3" [[deps.ClimaTimeSteppers]] deps = ["ClimaComms", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "23c8346606e165aa8805f25063f24e39bd8e148d" +git-tree-sha1 = "4ccf3dcc43dfce0d5c0e437dc432b5b20233e2fa" uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79" -version = "0.8.5" +version = "0.8.6" weakdeps = ["BenchmarkTools", "CUDA", "OrderedCollections", "PrettyTables", "StatsBase"] [deps.ClimaTimeSteppers.extensions] @@ -1338,9 +1338,9 @@ version = "1.7.5" [[deps.GPUToolbox]] deps = ["LLVM"] -git-tree-sha1 = "5bfe837129bf49e2e049b4f1517546055cc16a93" +git-tree-sha1 = "9e9186b09a13b7f094f87d1a9bb266d8780e1b1c" uuid = "096a3bc2-3ced-46d0-87f4-dd12716f4bfc" -version = "0.3.0" +version = "1.0.0" [[deps.GaussQuadrature]] deps = ["SpecialFunctions"] @@ -1450,9 +1450,9 @@ version = "0.1.0" [[deps.Glib_jll]] deps = ["Artifacts", "GettextRuntime_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"] -git-tree-sha1 = "6b4d2dc81736fe3980ff0e8879a9fc7c33c44ddf" +git-tree-sha1 = "24f6def62397474a297bfcec22384101609142ed" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.86.2+0" +version = "2.86.3+0" [[deps.Glob]] git-tree-sha1 = "83cb0092e2792b9e3a865b6655e88f5b862607e2" @@ -1961,9 +1961,9 @@ version = "1.18.0+0" [[deps.Libmount_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3acf07f130a76f87c041cfb2ff7d7284ca67b072" +git-tree-sha1 = "97bbca976196f2a1eb9607131cb108c69ec3f8a6" uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "XZ_jll", "Zlib_jll", "Zstd_jll"] @@ -1973,9 +1973,9 @@ version = "4.7.2+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "2a7a12fc0a4e7fb773450d17975322aa77142106" +git-tree-sha1 = "d0205286d9eceadc518742860bf23f703779a3d6" uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700" -version = "2.41.2+0" +version = "2.41.3+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Printf"] @@ -1988,10 +1988,10 @@ deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearOperators]] -deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "TimerOutputs"] -git-tree-sha1 = "db137007d2c4ed948aa5f2518a2b451851ea8bda" +deps = ["FastClosures", "LinearAlgebra", "Printf", "SparseArrays", "TimerOutputs"] +git-tree-sha1 = "80f975f228586a745c8716ff3aa33715fe9ee188" uuid = "5c8ed15e-5a4c-59e4-a42b-c7e8811fb125" -version = "2.11.0" +version = "2.12.0" [deps.LinearOperators.extensions] LinearOperatorsAMDGPUExt = "AMDGPU" @@ -2390,9 +2390,9 @@ version = "0.1.0" [[deps.NearestNeighbors]] deps = ["AbstractTrees", "Distances", "StaticArrays"] -git-tree-sha1 = "2949f294f82b5ad7192fd544a988a1e785438ee2" +git-tree-sha1 = "e2c3bba08dd6dedfe17a17889131b885b8c082f0" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.26" +version = "0.4.27" [[deps.NetCDF_jll]] deps = ["Artifacts", "Blosc_jll", "Bzip2_jll", "HDF5_jll", "JLLWrappers", "LazyArtifacts", "LibCURL_jll", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "TOML", "XML2_jll", "Zlib_jll", "Zstd_jll", "libaec_jll", "libzip_jll"] @@ -2422,12 +2422,12 @@ version = "0.5.5" [[deps.Oceananigans]] deps = ["Adapt", "Crayons", "CubedSphere", "Dates", "Distances", "DocStringExtensions", "FFTW", "GPUArraysCore", "Glob", "InteractiveUtils", "JLD2", "KernelAbstractions", "Krylov", "LinearAlgebra", "Logging", "MPI", "MuladdMacro", "OffsetArrays", "OrderedCollections", "Pkg", "Printf", "ReactantCore", "Rotations", "SeawaterPolynomials", "SparseArrays", "StaticArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "50180d492979bd70b9dc093eaf3872661e7220b9" +git-tree-sha1 = "71904792851641c88c96ae20f1960615c21cf15c" uuid = "9e8cae18-63c1-5223-a75c-80ca9d6e9a09" -version = "0.104.2" +version = "0.104.3" [deps.Oceananigans.extensions] - OceananigansAMDGPUExt = "AMDGPU" + OceananigansAMDGPUExt = ["AMDGPU", "AbstractFFTs"] OceananigansCUDAExt = ["CUDA", "GPUArrays", "GPUArraysCore"] OceananigansEnzymeExt = "Enzyme" OceananigansMakieExt = "Makie" @@ -2439,6 +2439,7 @@ version = "0.104.2" [deps.Oceananigans.weakdeps] AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" + AbstractFFTs = "621f4979-c628-5d54-868e-fcf4e3e8185c" CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" ConstructionBase = "187b0558-2788-49d3-abe0-74a17ed4e7c9" Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9" @@ -2537,9 +2538,9 @@ version = "0.5.6+0" [[deps.Optim]] deps = ["ADTypes", "EnumX", "FillArrays", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "PositiveFactorizations", "Printf", "SparseArrays", "Statistics"] -git-tree-sha1 = "e4f98846b70ef55e111ac8c40add135256c0cc47" +git-tree-sha1 = "7957b66b4e80f1031417197099f35273f7dd93dd" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "2.0.0" +version = "2.0.1" weakdeps = ["MathOptInterface"] [deps.Optim.extensions] @@ -2595,9 +2596,9 @@ version = "0.4.4" [[deps.PROJ_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "Libtiff_jll", "SQLite_jll"] -git-tree-sha1 = "817778f5802156bff35b472c73b0c4e611bd23c3" +git-tree-sha1 = "af57004c3b686097d563f9c394d7886431a38c75" uuid = "58948b4f-47e0-5654-a9ad-f609743f8632" -version = "902.700.0+0" +version = "902.700.100+0" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -2727,10 +2728,10 @@ uuid = "8162dcfd-2161-5ef2-ae6c-7681170c5f98" version = "0.2.0" [[deps.PrettyTables]] -deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "1101cd475833706e4d0e7b122218257178f48f34" +deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "REPL", "Reexport", "StringManipulation", "Tables"] +git-tree-sha1 = "c5a07210bd060d6a8491b0ccdee2fa0235fc00bf" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.4.0" +version = "3.1.2" [[deps.Primes]] deps = ["IntegerMathUtils"] @@ -2923,9 +2924,9 @@ version = "0.5.1+0" [[deps.RootSolvers]] deps = ["ForwardDiff", "Printf"] -git-tree-sha1 = "769388dbf7656e70f6ee250f35bb6cbca8f43203" +git-tree-sha1 = "3b6c0089c3dc3d5780786d5007e976fe9d1b7887" uuid = "7181ea78-2dcb-4de3-ab41-2b8ab5a31e74" -version = "0.4.6" +version = "1.0.2" [[deps.Roots]] deps = ["Accessors", "CommonSolve", "Printf"] @@ -2972,9 +2973,9 @@ version = "0.5.17" [[deps.SCS]] deps = ["LinearAlgebra", "MathOptInterface", "OpenBLAS32_jll", "PrecompileTools", "SCS_jll", "SparseArrays"] -git-tree-sha1 = "96cfe159e1989c07e5a35d1cb5a1a12175bd6192" +git-tree-sha1 = "cfc9973a2fd1089fbd6c02b324f4ef189f9697e6" uuid = "c946c3f1-0d1f-5ce8-9dea-7daa1f7e2d13" -version = "2.6.0" +version = "2.6.1" [deps.SCS.extensions] SCSSCS_GPU_jllExt = ["SCS_GPU_jll"] @@ -3372,9 +3373,9 @@ weakdeps = ["ClimaParams"] [[deps.SymbolicIndexingInterface]] deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] -git-tree-sha1 = "b19cf024a2b11d72bef7c74ac3d1cbe86ec9e4ed" +git-tree-sha1 = "94c58884e013efff548002e8dc2fdd1cb74dfce5" uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.3.44" +version = "0.3.46" weakdeps = ["PrettyTables"] [deps.SymbolicIndexingInterface.extensions] @@ -3432,9 +3433,9 @@ version = "1.0.2" [[deps.Thermodynamics]] deps = ["ForwardDiff", "Random", "RootSolvers"] -git-tree-sha1 = "3958121b3ed912e0858960b682de6e98cb4949dd" +git-tree-sha1 = "2983a61f8fe7e03957efea2b32b2f2c446b4a099" uuid = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c" -version = "0.15.7" +version = "0.15.8" weakdeps = ["ClimaParams"] [deps.Thermodynamics.extensions]