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Merge pull request #4 from CobiontID/conda

Pull request merge
gq1pushed 9 commits to master • 73e51d4…d4f7e0b • 
29 days ago

Merge pull request #3 from gq1/master

Pull request merge
gq1pushed 8 commits to conda • 73e51d4…63f19f7 • 
29 days ago

Merge pull request #1 from muffato/master

gq1created conda • 73e51d4 • 
29 days ago

Merge pull request #1 from muffato/master

Pull request merge
gq1pushed 2 commits to master • a4429f6…73e51d4 • 
on Jan 29

Update README.md

emvcaestpushed 1 commit to master • 68e6aeb…a4429f6 • 
on Mar 5, 2024

Email only sent when not empty string

emvcaestpushed 1 commit to master • 0e6da0a…68e6aeb • 
on Mar 4, 2024

Add FastANI

emvcaestpushed 1 commit to master • 0e108d1…0e6da0a • 
on Mar 1, 2024

Add Rickettsia with ANI search

emvcaestpushed 1 commit to master • fc97ec5…0e108d1 • 
on Mar 1, 2024

Don't run when already output in final directory

emvcaestpushed 1 commit to master • fcb56e7…fc97ec5 • 
on Mar 1, 2024

Change to genus name

emvcaestpushed 1 commit to master • e8a3751…fcb56e7 • 
on Mar 1, 2024

Bug fix host ranges

emvcaestpushed 1 commit to master • 9ab0fc2…e8a3751 • 
on Feb 29, 2024

Add information for additional 11 endosymbionts

emvcaestpushed 1 commit to master • 7a4edc3…9ab0fc2 • 
on Feb 29, 2024

Allow Spiroplasma submission

emvcaestpushed 1 commit to master • c640bae…7a4edc3 • 
on Feb 29, 2024

Update variable genename to rotate on

emvcaestpushed 1 commit to master • fc55c51…c640bae • 
on Feb 29, 2024

Update hifiasm output - bug fixes

emvcaestpushed 1 commit to master • e4e02d8…fc55c51 • 
on Feb 26, 2024

Update hifiasm version

emvcaestpushed 1 commit to master • 788e19b…e4e02d8 • 
on Feb 26, 2024

Move JIRA ticket creation to first pipeline

emvcaestpushed 1 commit to master • 1aa6451…788e19b • 
on Feb 19, 2024

Check if taxid already exists

emvcaestpushed 1 commit to master • e47e805…1aa6451 • 
on Feb 19, 2024

Add code for email requests and outdir

emvcaestpushed 1 commit to master • 5e3ca90…e47e805 • 
on Feb 19, 2024

Update README.md

emvcaestpushed 1 commit to master • 2ddc168…5e3ca90 • 
on Feb 19, 2024

Update to latest name envs

emvcaestpushed 1 commit to master • 4a5c8c5…2ddc168 • 
on Jun 28, 2023

Updated 16S sequences

emvcaestpushed 4 commits to master • 884ac30…4a5c8c5 • 
on Jun 28, 2023