ICA-AROMA.0.4.4-beta-jammy.Dockerfile

FROM ghcr.io/fcp-indi/c-pac/ubuntu:jammy-non-free AS ICA-AROMA
USER root

# install ICA-AROMA
COPY dev/docker_data/checksum/ICA-AROMA.0.4.4.sha384 /tmp/checksum.sha384
RUN mkdir -p /opt/ICA-AROMA \
    && curl -sL https://github.com/rhr-pruim/ICA-AROMA/archive/v0.4.4-beta.tar.gz -o /tmp/ICA-AROMA.tar.gz \
    && sha384sum --check /tmp/checksum.sha384 \
    && tar -xzC /opt/ICA-AROMA --strip-components 1 -f /tmp/ICA-AROMA.tar.gz \
    && chmod +x /opt/ICA-AROMA/ICA_AROMA.py
ENV PATH=/opt/ICA-AROMA:$PATH

ENTRYPOINT ["/bin/bash"]

# Link libraries for Singularity images
RUN ldconfig

RUN apt-get clean && \
    apt-get autoremove -y && \
    rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

# set user
USER c-pac_user

# Only keep what we need
FROM scratch
LABEL org.opencontainers.image.description "NOT INTENDED FOR USE OTHER THAN AS A STAGE IMAGE IN A MULTI-STAGE BUILD \
ICA-AROMA 0.4.4-beta stage"
COPY --from=ICA-AROMA /opt/ICA-AROMA/ /opt/ICA-AROMA/