StructCoalescent/NAMESPACE at master · IanPRoberts/StructCoalescent · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(as.ED,default)
S3method(as.ED,matrix)
S3method(as.ED,phylo)
S3method(as.ED,strphylo)
S3method(as.strphylo,ED)
S3method(as.strphylo,default)
S3method(as.strphylo,phylo)
S3method(as.strphylo,treedata)
S3method(as.treedata,ED)
S3method(as.treedata,strphylo)
S3method(plot,ED)
S3method(plot,strphylo)
export(BitMigMatC)
export(DTA_likelihood)
export(DTA_sampling)
export(DemeDecompC)
export(Ewing_2004_mcmc)
export(FitMigMatC)
export(MTT_st_coal_node)
export(MTT_transition_kernel)
export(MultiTypeTree_xml)
export(NodeCountC)
export(NodeIndicesC)
export(StructCoalescent_mcmc)
export(Vaughan_2015_MultiTypeTree_mcmc)
export(as.strphylo)
export(bit_mig_mat_gibbs_update)
export(coal_rate_gibbs_update)
export(coalescent_node_pie_charts)
export(default_priors)
export(dexp_trunc)
export(exact_consensus)
export(fitch)
export(master_xml)
export(pexp_trunc)
export(rexp_trunc)
export(rstrphylo)
export(structured_coalescent_likelihood)
importFrom(Rcpp,sourceCpp)
importFrom(treeio,as.treedata)
useDynLib(StructCoalescent)