Custom annotation option command not found

[pablosolar]

Hi!

I am running this command:

dotnet /home/Nirvana/bin/Release/net6.0/Nirvana.dll -c Cache/GRCh37/Both --sd SupplementaryAnnotation/GRCh37 -r Homo_sapiens.GRCh37.Nirvana.dat -i NA12878.chr1.9009406.vcf -o out/NA12878_nirvana --sd custom

where custom is an s3 directory with the following:

aws s3 ls s3://....nirvana/data/custom/            
2024-05-28 10:58:14        149 custom.nsa
2024-05-28 10:58:15         64 custom.nsa.idx
2024-05-28 10:58:15        450 custom.nsa.schema

but raising:

Some problems were encountered when parsing the command line options:
  - ERROR: Found unknown command-line option(s): --sd custom

Do you know what could be happening? If I remove the --sd custom, it works fine. Thanks!