Problem in execution through terminal #57
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Hi Jacob, Thanks for vesselvio. I see that the application is directly downloadable for windows and Mac. I use Linux, so I tried to use it through terminal. I downloaded the zipped code from github and installed the dependencies as in the requirements file. I tried it the with the dataset under the volumes folder (JIT_volume). when I executed the VVTerminal.py the following error shows up TypeError: 'NoneType' object is not iterable Here is the Traceback: |
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Replies: 5 comments 4 replies
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Thanks for pointing out this bug!! I've identified the problem and went ahead and pushed a hot fix to main. Would you be willing to download the main source code again and give it another try? |
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Hi Jacob, Thanks for the very quick reply and fixing it. Now I could run it, however it was showing some file not found error for the results_folder. line 98 os.mkdir('/home/rajalakshmi/Segmentation/vesselvio_results/results_folder/') however it again shows the same error while writing the VesselVio 3D Dataset Analysis Results.xlsx file. traceback: Traceback (most recent call last): |
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Thanks for the reply and sorry for the back to back report: Could not load .nii file using nibabel: No such file or no access: 'VOLUME_FILE.nii' |
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If you look here: You'll see that there are two example volumes. If you want to visualize them, make sure you change the visualization options in the |
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Hi Jacob, Thanks a lot for replying! |
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Thanks for pointing out this bug!!
I've identified the problem and went ahead and pushed a hot fix to main.
Would you be willing to download the main source code again and give it another try?