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updated links to sources on GitHub Note that the links were also updated in release notes etc, i.e. they are now pointing to the most reason versions of the files. It was too much work to make them point to the correct commits. perl -wpi~ -e 's(http://code.google.com/p/mdanalysis/source/browse/package#package%2Fexamples)(https://github.com/MDAnalysis/mdanalysis/tree/develop/package/examples)g' *md perl -wpi~ -e 's(http://code.google.com/p/mdanalysis/source/browse/#git%2Fpackage%2Fexamples)(https://github.com/MDAnalysis/mdanalysis/tree/develop/package/examples)g' *md perl -wpi~ -e 's(http://code.google.com/p/mdanalysis/source/browse/#git%2Fpackage%2Fdoc%2Fsphinx%2Fsource%2Fdocumentation_pages)(https://github.com/MDAnalysis/mdanalysis/tree/develop/package/doc/sphinx/source/documentation_pages)g' *md perl -wpi~ -e 's(http://code.google.com/p/mdanalysis/source/browse/#git%2Fpackage%2FMDAnalysis%2Fanalysis)(https://github.com/MDAnalysis/mdanalysis/tree/develop/package/MDAnalysis/analysis)g' *.md perl -wpi~ -e 's(http://code.google.com/p/mdanalysis/source/browse/)(https://github.com/MDAnalysis/mdanalysis/)g' *.md
updated links to developer docs perl -wpi~ -e 's(http://mdanalysis.googlecode.com/git-history/develop/package/doc/html)(http://devdocs.mdanalysis.org)g' *.md
-MDAnalysis wiki doc changes: -updated some of the simpler google code issue links to the new github / subdomain URL format for the issue tracker
A collegue was confused why centerOfMass didn't give him the pbc-fixed COM. The documentation here didn't indicate that it was possible to fix this behaviour.
../finishGoogleCodeGitHubWikiMigration/finishGoogleCodeGitHubWikiMigration: Moved pages from mdanalysis wiki branch to mdanalysis.wiki master branch.