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Fix SOFA CV scoring, urine_output_rate diffs, and Elixhauser no_drg #122
Workflow file for this run
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| name: BigQuery SQL syntax check via sqlglot | |
| on: | |
| pull_request: | |
| paths: | |
| - 'mimic-iv/concepts/**' | |
| - 'src/mimic_utils/**' | |
| - '.github/scripts/check_sql_syntax.py' | |
| - '.github/workflows/sql_syntax_check.yml' | |
| permissions: | |
| contents: read | |
| jobs: | |
| syntax-check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v7 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.12" | |
| - name: Install locked dependencies | |
| run: pip install -r requirements-lock.txt | |
| - name: Install package | |
| run: pip install -e . --no-deps | |
| - name: Parse concept SQL with sqlglot | |
| run: python .github/scripts/check_sql_syntax.py mimic-iv/concepts |