fix ubuntu

Author: bjarthur

src/director.jl

@@ -229,7 +229,7 @@ t0=time()
               export JULIA=$(ENV["JULIA"]) \;
               export JULIA_PROJECT=$(ENV["JULIA_PROJECT"]) \;
               export JULIA_DEPOT_PATH=$(ENV["JULIA_DEPOT_PATH"]) \;
-              export HOSTNAME=$(ENV["HOSTNAME"]) \;
+              export HOSTNAME=$(Libc.gethostname()) \;
               export LSB_JOBINDEX=$n \;
               $cmd \&\> $logfile_scratch/squatter$n.log`
       @info string("DIRECTOR: ",pcmd)

test/halffilledtiles/avx-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/halffilledtiles/cpu-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/halffilledtiles/hdf5-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/halffilledtiles/localscratch-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/keepscratch-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/linearinterp-onechannel-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/linearinterp-threechannel-cpu-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/linearinterp-threechannel-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/onechannel-hdf5-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/onechannel-local-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/threechannel-hdf5-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32

test/hollowcube/threechannel-local-parameters.jl

@@ -112,7 +112,7 @@ const max_tilechannels_per_job=500  # maximum number of input tiles * nchannels
 # larger is more efficient with file i/o; smaller is more parallel computation
 
 
-const which_cluster = [ENV["HOSTNAME"]] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
+const which_cluster = [Libc.gethostname()] # "janelia" or ["hostname1", "hostname2", "hostname3", ...]
 const bad_nodes = []  # e.g. ["h09u20"]
 
 const ncores_incluster = 48*32