who's working on reproducing what papers
NOT FINAL -- WORK IN PROGRESS
Eyal Bairey, Eric D. Kelsic, Roy Kishony. "High-order species interactions shape ecosystem diversity" Nature Communications 7: 12285 (2016). http://www.nature.com/articles/ncomms12285
Eva Delmas, Ulrich Brose, Dominque Gravel, Daniel B. Stouffer, Timothée Poisot. "Simulations of biomass dynamics in community food webs" Methods in Ecology and Evolution (2017). http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12713/full
Martin Lindegren, David M. Checkley Jr, Mark D. Ohman, J. Anthony Koslow, Ralf Goericke. "Resilience and stability of a pelagic marine ecosystem" Proceedings of the Royal Society B 283: 20151931 (2016). http://rspb.royalsocietypublishing.org/content/283/1822/20151931
Vasilis Dakos, Marten Scheffer, Egbert H. van Nes, Victor Brovkin, Vladimir Petoukhov, and Hermann Held. "Slowing down as an early warning signal for abrupt climate change" PNAS 105: 14308–14312 (2008). http://www.pnas.org/content/105/38/14308.abstract
A. Andrew M. MacDonald, Gustavo Q. Romero, and Diane S. Srivastava. "Predator phylogenetic diversity decreases predation rate via antagonistic interactions" bioRxiv. http://biorxiv.org/content/early/2016/11/23/089144 https://zenodo.org/record/168054
Shinichi Sunagawa et al. "Structure and function of the global ocean microbiome" Science 348: 1261359 (2015). http://science.sciencemag.org/content/348/6237/1261359
Jeff S. Bowman and Hugh W. Ducklow. "Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula" PLOS One: 0135868 (2015). http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0135868
Ryan D. Batt, Stephen R. Carpenter, and Anthony R. Ives. "Extreme events in lake ecosystem time series" L&O Letters (2017). http://onlinelibrary.wiley.com/doi/10.1002/lol2.10037/abstract
Sean C. Anderson, Trevor A. Branch, Andrew B. Cooper, and Nicholas K. Dulvy. "Black-swan events in animal populations" PNAS 114: 3252-3257 (2017). http://www.pnas.org/content/114/12/3252.abstract
Sunagawa, S. et al. Ocean plankton. Structure and function of the global ocean microbiome. Science 348, 1261359 (2015). http://science.sciencemag.org/content/348/6237/1261359
Morueta-Holme, Naia. "A network approach for inferring species associations from co-occurring data." Ecography 39: 1139–1150, 2016. http://onlinelibrary.wiley.com/store/10.1111/ecog.01892/asset/ecog1892.pdf?v=1&t=j1o34dxi&s=97eed83fb7448934fd902f984109f4255ddd0d4f
Morgan Taschuk, Greg Wilson. "Ten simple rules for making research software more robust" PLOS Comp Bio 13: e1005412 (2017). http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005412
Greg Wilson, Jennifer Bryan, Karen Cranston, Justin Kitzes, Lex Nederbragt, Tracy K. Teal. "Good Enough Practices in Scientific Computing" arXiv. https://arxiv.org/abs/1609.00037
Geir Kjetil Sandve, Anton Nekrutenko, James Taylor, Elvind Hovig. "Ten Simple Rules for Reproducible Computational Research" PLOS Comp Bio 9: e1003285 (2013). http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1003285
Malika Ihle, Isabel S Winney, Anna Krystalli, Michael Croucherd. "Striving for transparent and credible research: practical guidelines for behavioral ecologists" Behavioral Ecology (2017). https://academic.oup.com/beheco/article/3069145/Striving-for-transparent-and-credible-research
Justin Kitzes, Daniel Turek, Fatma Deniz (Eds.). "The Practice of Reproducible Research" University of California Press (2017). https://www.gitbook.com/book/bids/the-practice-of-reproducible-research/details