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Motivations

  1. Make our work reproducible for ourselves - a necessary but not sufficient test for correctness.
  2. Make our work reproducible for others - easier peer review, easier for other people to collaborate, contribute, extend your work (higher impact), transparency as accountability

Principles

Lessons

  • version control
  • project organization / tidydata principles
  • literate programming and documentation
  • archiving data and code / preprints / licensing

Version Control (Git & GitHub)

What are Git & GitHub? Why would we use them?

Git

capture process

  • subjective decisions
  • sometimes mistakes, but important for reproduction
  • explicit note-taking allows robustness tests post-hoc, alternative analyses, "multiverse" testing (a la Gelman)