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AO tag #114

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t-whalley opened this issue Nov 20, 2024 · 2 comments
Open

AO tag #114

t-whalley opened this issue Nov 20, 2024 · 2 comments
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t-whalley commented Nov 20, 2024 •
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VCF needs AO field (like in FreeBayes) if we want to use new tbtamr. Doesn't work with our outputs nor those from tb-profiler with BCFtools
@t-whalley t-whalley self-assigned this Nov 20, 2024
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These doesn't seem to be an individual sample issue. Failing

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Put AF instead of calculating? bcftools +fill-tags <in> -Ob -o <out> -- -t AF

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