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{
"R": {
"Version": "4.4.1",
"Repositories": [
{
"Name": "CRAN",
"URL": "https://cloud.r-project.org"
}
]
},
"Packages": {
"Amelia": {
"Package": "Amelia",
"Version": "1.8.3",
"Source": "Repository",
"Date": "2024-11-07",
"Title": "A Program for Missing Data",
"Authors@R": "c( person(\"James\", \"Honaker\", email = \"james@hona.kr\", role = c(\"aut\")), person(\"Gary\", \"King\", email = \"king@harvard.edu\", role = c(\"aut\")), person(\"Matthew\", \"Blackwell\", email = \"mblackwell@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-3689-9527\")) )",
"Depends": [
"R (>= 3.0.2)",
"Rcpp (>= 0.11)"
],
"Imports": [
"foreign",
"utils",
"grDevices",
"graphics",
"methods",
"stats",
"rlang"
],
"LinkingTo": [
"Rcpp (>= 0.11)",
"RcppArmadillo"
],
"Description": "A tool that \"multiply imputes\" missing data in a single cross-section (such as a survey), from a time series (like variables collected for each year in a country), or from a time-series-cross-sectional data set (such as collected by years for each of several countries). Amelia II implements our bootstrapping-based algorithm that gives essentially the same answers as the standard IP or EMis approaches, is usually considerably faster than existing approaches and can handle many more variables. Unlike Amelia I and other statistically rigorous imputation software, it virtually never crashes (but please let us know if you find to the contrary!). The program also generalizes existing approaches by allowing for trends in time series across observations within a cross-sectional unit, as well as priors that allow experts to incorporate beliefs they have about the values of missing cells in their data. Amelia II also includes useful diagnostics of the fit of multiple imputation models. The program works from the R command line or via a graphical user interface that does not require users to know R.",
"License": "GPL (>= 2)",
"URL": "https://gking.harvard.edu/amelia",
"Suggests": [
"tcltk",
"broom",
"rmarkdown",
"knitr"
],
"VignetteBuilder": "knitr",
"RoxygenNote": "7.3.2",
"Encoding": "UTF-8",
"LazyData": "true",
"NeedsCompilation": "yes",
"Author": "James Honaker [aut], Gary King [aut], Matthew Blackwell [aut, cre] (<https://orcid.org/0000-0002-3689-9527>)",
"Maintainer": "Matthew Blackwell <mblackwell@gmail.com>",
"Repository": "CRAN"
},
"BBmisc": {
"Package": "BBmisc",
"Version": "1.13",
"Source": "Repository",
"Title": "Miscellaneous Helper Functions for B. Bischl",
"Authors@R": "c( person(\"Bernd\", \"Bischl\", , \"bernd_bischl@gmx.net\", role = c(\"aut\", \"cre\")), person(\"Michel\", \"Lang\", , \"michellang@gmail.com\", role = \"aut\"), person(\"Jakob\", \"Bossek\", , \"j.bossek@gmail.com\", role = \"aut\"), person(\"Daniel\", \"Horn\", , \"daniel.horn@tu-dortmund.de\", role = \"aut\"), person(\"Jakob\", \"Richter\", , \"code@jakob-r.de\", role = \"aut\"), person(\"Dirk\", \"Surmann\", , \"surmann@statistik.tu-dortmund.de\", role = \"aut\") )",
"Description": "Miscellaneous helper functions for and from B. Bischl and some other guys, mainly for package development.",
"License": "BSD_2_clause + file LICENSE",
"URL": "https://github.com/berndbischl/BBmisc",
"BugReports": "https://github.com/berndbischl/BBmisc/issues",
"Imports": [
"checkmate (>= 1.8.0)",
"data.table",
"methods",
"stats",
"utils"
],
"Suggests": [
"codetools",
"microbenchmark",
"testthat"
],
"ByteCompile": "yes",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.1",
"NeedsCompilation": "yes",
"Author": "Bernd Bischl [aut, cre], Michel Lang [aut], Jakob Bossek [aut], Daniel Horn [aut], Jakob Richter [aut], Dirk Surmann [aut]",
"Maintainer": "Bernd Bischl <bernd_bischl@gmx.net>",
"Repository": "CRAN"
},
"CRTgeeDR": {
"Package": "CRTgeeDR",
"Version": "2.0.1",
"Source": "Repository",
"Title": "Doubly Robust Inverse Probability Weighted Augmented GEE Estimator",
"Authors@R": "c(person(\"Melanie\", \"Prague\", role = c(\"aut\", \"cre\"),email = \"mprague@hsph.harvard.edu\"), person(\"Paul\", \"Gilbert\", role = \"ctb\",comment = \"Author of R package numDeriv, which has been acknowledged in numDeriv.R\"), person(\"Ravi\", \"Varadhan\", role = \"ctb\",comment = \"Author of R package numDeriv, which has been acknowledged in numDeriv.R\"), person(\"Ming\", \"Wang\", role = \"ctb\", comment = \"Author of R package geesmv, which has been acknowledged in getFay.R\"), person(\"Lee\", \"McDaniel\", role = \"ctb\", comment = \"Author of R package geeM, which has been modfied and references in multiple R files\"), person(\"Nick\", \"Henderson\", role = \"ctb\", comment = \"Author of R package geeM, which has been modfied and references in multiple R files\"))",
"Maintainer": "Melanie Prague <mprague@hsph.harvard.edu>",
"Description": "Implements a semi-parametric GEE estimator accounting for missing data with Inverse-probability weighting (IPW) and for imbalance in covariates with augmentation (AUG). The estimator IPW-AUG-GEE is Doubly robust (DR).",
"License": "GPL (>= 2)",
"Depends": [
"R (>= 2.10)",
"Matrix",
"MASS",
"ggplot2",
"grDevices",
"graphics",
"stats",
"methods"
],
"LazyData": "true",
"NeedsCompilation": "no",
"Author": "Melanie Prague [aut, cre], Paul Gilbert [ctb] (Author of R package numDeriv, which has been acknowledged in numDeriv.R), Ravi Varadhan [ctb] (Author of R package numDeriv, which has been acknowledged in numDeriv.R), Ming Wang [ctb] (Author of R package geesmv, which has been acknowledged in getFay.R), Lee McDaniel [ctb] (Author of R package geeM, which has been modfied and references in multiple R files), Nick Henderson [ctb] (Author of R package geeM, which has been modfied and references in multiple R files)",
"Repository": "CRAN"
},
"DEoptimR": {
"Package": "DEoptimR",
"Version": "1.1-3-1",
"Source": "Repository",
"Date": "2024-11-23",
"Title": "Differential Evolution Optimization in Pure R",
"Authors@R": "c( person(c(\"Eduardo\", \"L. T.\"), \"Conceicao\", role = c(\"aut\", \"cre\"), email = \"mail@eduardoconceicao.org\"), person(\"Martin\", \"Maechler\", role = \"ctb\", email = \"maechler@stat.math.ethz.ch\", comment = c(ORCID = \"0000-0002-8685-9910\")) )",
"URL": "svn://svn.r-forge.r-project.org/svnroot/robustbase/pkg/DEoptimR",
"Description": "Differential Evolution (DE) stochastic heuristic algorithms for global optimization of problems with and without general constraints. The aim is to curate a collection of its variants that (1) do not sacrifice simplicity of design, (2) are essentially tuning-free, and (3) can be efficiently implemented directly in the R language. Currently, it provides implementations of the algorithms 'jDE' by Brest et al. (2006) <doi:10.1109/TEVC.2006.872133> for single-objective optimization and 'NCDE' by Qu et al. (2012) <doi:10.1109/TEVC.2011.2161873> for multimodal optimization (single-objective problems with multiple solutions).",
"Imports": [
"stats"
],
"Enhances": [
"robustbase"
],
"License": "GPL (>= 2)",
"Author": "Eduardo L. T. Conceicao [aut, cre], Martin Maechler [ctb] (<https://orcid.org/0000-0002-8685-9910>)",
"Maintainer": "Eduardo L. T. Conceicao <mail@eduardoconceicao.org>",
"Repository": "CRAN",
"Repository/R-Forge/Project": "robustbase",
"Repository/R-Forge/Revision": "1008",
"Repository/R-Forge/DateTimeStamp": "2024-11-23 19:13:45",
"NeedsCompilation": "no"
},
"DT": {
"Package": "DT",
"Version": "0.33",
"Source": "Repository",
"Type": "Package",
"Title": "A Wrapper of the JavaScript Library 'DataTables'",
"Authors@R": "c( person(\"Yihui\", \"Xie\", role = \"aut\"), person(\"Joe\", \"Cheng\", email = \"joe@posit.co\", role = c(\"aut\", \"cre\")), person(\"Xianying\", \"Tan\", role = \"aut\"), person(\"JJ\", \"Allaire\", role = \"ctb\"), person(\"Maximilian\", \"Girlich\", role = \"ctb\"), person(\"Greg\", \"Freedman Ellis\", role = \"ctb\"), person(\"Johannes\", \"Rauh\", role = \"ctb\"), person(\"SpryMedia Limited\", role = c(\"ctb\", \"cph\"), comment = \"DataTables in htmlwidgets/lib\"), person(\"Brian\", \"Reavis\", role = c(\"ctb\", \"cph\"), comment = \"selectize.js in htmlwidgets/lib\"), person(\"Leon\", \"Gersen\", role = c(\"ctb\", \"cph\"), comment = \"noUiSlider in htmlwidgets/lib\"), person(\"Bartek\", \"Szopka\", role = c(\"ctb\", \"cph\"), comment = \"jquery.highlight.js in htmlwidgets/lib\"), person(\"Alex\", \"Pickering\", role = c(\"ctb\")), person(\"William\", \"Holmes\", role = c(\"ctb\")), person(\"Mikko\", \"Marttila\", role = c(\"ctb\")), person(\"Andres\", \"Quintero\", role = c(\"ctb\")), person(\"Stéphane\", \"Laurent\", role = c(\"ctb\")), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Data objects in R can be rendered as HTML tables using the JavaScript library 'DataTables' (typically via R Markdown or Shiny). The 'DataTables' library has been included in this R package. The package name 'DT' is an abbreviation of 'DataTables'.",
"URL": "https://github.com/rstudio/DT",
"BugReports": "https://github.com/rstudio/DT/issues",
"License": "GPL-3 | file LICENSE",
"Imports": [
"htmltools (>= 0.3.6)",
"htmlwidgets (>= 1.3)",
"httpuv",
"jsonlite (>= 0.9.16)",
"magrittr",
"crosstalk",
"jquerylib",
"promises"
],
"Suggests": [
"knitr (>= 1.8)",
"rmarkdown",
"shiny (>= 1.6)",
"bslib",
"future",
"testit",
"tibble"
],
"VignetteBuilder": "knitr",
"RoxygenNote": "7.3.1",
"Encoding": "UTF-8",
"NeedsCompilation": "no",
"Author": "Yihui Xie [aut], Joe Cheng [aut, cre], Xianying Tan [aut], JJ Allaire [ctb], Maximilian Girlich [ctb], Greg Freedman Ellis [ctb], Johannes Rauh [ctb], SpryMedia Limited [ctb, cph] (DataTables in htmlwidgets/lib), Brian Reavis [ctb, cph] (selectize.js in htmlwidgets/lib), Leon Gersen [ctb, cph] (noUiSlider in htmlwidgets/lib), Bartek Szopka [ctb, cph] (jquery.highlight.js in htmlwidgets/lib), Alex Pickering [ctb], William Holmes [ctb], Mikko Marttila [ctb], Andres Quintero [ctb], Stéphane Laurent [ctb], Posit Software, PBC [cph, fnd]",
"Maintainer": "Joe Cheng <joe@posit.co>",
"Repository": "CRAN"
},
"Deriv": {
"Package": "Deriv",
"Version": "4.1.6",
"Source": "Repository",
"Type": "Package",
"Title": "Symbolic Differentiation",
"Date": "2024-09-12",
"Authors@R": "c(person(given=\"Andrew\", family=\"Clausen\", role=\"aut\"), person(given=\"Serguei\", family=\"Sokol\", role=c(\"aut\", \"cre\"), email=\"sokol@insa-toulouse.fr\", comment = c(ORCID = \"0000-0002-5674-3327\")), person(given=\"Andreas\", family=\"Rappold\", role=\"ctb\", email=\"arappold@gmx.at\"))",
"Description": "R-based solution for symbolic differentiation. It admits user-defined function as well as function substitution in arguments of functions to be differentiated. Some symbolic simplification is part of the work.",
"License": "GPL (>= 3)",
"Suggests": [
"testthat (>= 0.11.0)"
],
"BugReports": "https://github.com/sgsokol/Deriv/issues",
"RoxygenNote": "7.3.1",
"Imports": [
"methods"
],
"NeedsCompilation": "no",
"Author": "Andrew Clausen [aut], Serguei Sokol [aut, cre] (<https://orcid.org/0000-0002-5674-3327>), Andreas Rappold [ctb]",
"Maintainer": "Serguei Sokol <sokol@insa-toulouse.fr>",
"Repository": "CRAN"
},
"FactoMineR": {
"Package": "FactoMineR",
"Version": "2.11",
"Source": "Repository",
"Title": "Multivariate Exploratory Data Analysis and Data Mining",
"Author": "Francois Husson, Julie Josse, Sebastien Le, Jeremy Mazet",
"Maintainer": "Francois Husson <francois.husson@institut-agro.fr>",
"Depends": [
"R (>= 4.0)"
],
"Imports": [
"car",
"cluster",
"DT",
"ellipse",
"emmeans",
"flashClust",
"graphics",
"grDevices",
"lattice",
"leaps",
"MASS",
"multcompView",
"scatterplot3d",
"stats",
"utils",
"ggplot2",
"ggrepel"
],
"Suggests": [
"missMDA",
"knitr",
"Factoshiny",
"markdown"
],
"Description": "Exploratory data analysis methods to summarize, visualize and describe datasets. The main principal component methods are available, those with the largest potential in terms of applications: principal component analysis (PCA) when variables are quantitative, correspondence analysis (CA) and multiple correspondence analysis (MCA) when variables are categorical, Multiple Factor Analysis when variables are structured in groups, etc. and hierarchical cluster analysis. F. Husson, S. Le and J. Pages (2017).",
"License": "GPL (>= 2)",
"URL": "http://factominer.free.fr",
"BugReports": "https://github.com/husson/FactoMineR",
"Encoding": "UTF-8",
"VignetteBuilder": "knitr",
"NeedsCompilation": "yes",
"Repository": "CRAN"
},
"Formula": {
"Package": "Formula",
"Version": "1.2-5",
"Source": "Repository",
"Date": "2023-02-23",
"Title": "Extended Model Formulas",
"Description": "Infrastructure for extended formulas with multiple parts on the right-hand side and/or multiple responses on the left-hand side (see <doi:10.18637/jss.v034.i01>).",
"Authors@R": "c(person(given = \"Achim\", family = \"Zeileis\", role = c(\"aut\", \"cre\"), email = \"Achim.Zeileis@R-project.org\", comment = c(ORCID = \"0000-0003-0918-3766\")), person(given = \"Yves\", family = \"Croissant\", role = \"aut\", email = \"Yves.Croissant@univ-reunion.fr\"))",
"Depends": [
"R (>= 2.0.0)",
"stats"
],
"License": "GPL-2 | GPL-3",
"NeedsCompilation": "no",
"Author": "Achim Zeileis [aut, cre] (<https://orcid.org/0000-0003-0918-3766>), Yves Croissant [aut]",
"Maintainer": "Achim Zeileis <Achim.Zeileis@R-project.org>",
"Repository": "CRAN"
},
"GPArotation": {
"Package": "GPArotation",
"Version": "2024.3-1",
"Source": "Repository",
"Title": "Gradient Projection Factor Rotation",
"Authors@R": "c( person(\"Coen\", \"Bernaards\", email = \"cab.gparotation@gmail.com\", role = c(\"aut\",\"cre\")), person(\"Paul\", \"Gilbert\", email = \"pgilbert.ttv9z@ncf.ca\", role = \"aut\"), person(\"Robert\", \"Jennrich\", role = \"aut\") )",
"Depends": [
"R (>= 2.0.0)"
],
"Description": "Gradient Projection Algorithms for Factor Rotation. For details see ?GPArotation. When using this package, please cite: Bernaards and Jennrich (2005) <doi:10.1177/0013164404272507>. \"Gradient Projection Algorithms and Software for Arbitrary Rotation Criteria in Factor Analysis\".",
"LazyData": "yes",
"Imports": [
"stats"
],
"License": "GPL (>= 2)",
"URL": "https://optimizer.r-forge.r-project.org/GPArotation_www/",
"NeedsCompilation": "no",
"Author": "Coen Bernaards [aut, cre], Paul Gilbert [aut], Robert Jennrich [aut]",
"Maintainer": "Coen Bernaards <cab.gparotation@gmail.com>",
"Repository": "CRAN"
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"Package": "LiblineaR",
"Version": "2.10-24",
"Source": "Repository",
"Encoding": "UTF-8",
"Title": "Linear Predictive Models Based on the LIBLINEAR C/C++ Library",
"Date": "2024-09-13",
"Authors@R": "c( person(\"Thibault\",\"Helleputte\",email=\"thibault.helleputte@dnalytics.com\",role=c(\"cre\",\"aut\",\"cph\")), person(\"Jérôme\",\"Paul\",role=c(\"aut\")), person(\"Pierre\",\"Gramme\",role=c(\"aut\")) )",
"Description": "A wrapper around the LIBLINEAR C/C++ library for machine learning (available at <https://www.csie.ntu.edu.tw/~cjlin/liblinear/>). LIBLINEAR is a simple library for solving large-scale regularized linear classification and regression. It currently supports L2-regularized classification (such as logistic regression, L2-loss linear SVM and L1-loss linear SVM) as well as L1-regularized classification (such as L2-loss linear SVM and logistic regression) and L2-regularized support vector regression (with L1- or L2-loss). The main features of LiblineaR include multi-class classification (one-vs-the rest, and Crammer & Singer method), cross validation for model selection, probability estimates (logistic regression only) or weights for unbalanced data. The estimation of the models is particularly fast as compared to other libraries.",
"License": "GPL-2",
"LazyLoad": "yes",
"Suggests": [
"SparseM",
"Matrix"
],
"Imports": [
"methods"
],
"URL": "<https://dnalytics.com/software/liblinear/>",
"NeedsCompilation": "yes",
"Author": "Thibault Helleputte [cre, aut, cph], Jérôme Paul [aut], Pierre Gramme [aut]",
"Maintainer": "Thibault Helleputte <thibault.helleputte@dnalytics.com>",
"Repository": "CRAN"
},
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"Version": "7.3-60.2",
"Source": "Repository",
"Priority": "recommended",
"Date": "2024-01-12",
"Revision": "$Rev: 3641 $",
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"grDevices",
"graphics",
"stats",
"utils"
],
"Imports": [
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],
"Suggests": [
"lattice",
"nlme",
"nnet",
"survival"
],
"Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"), email = \"ripley@stats.ox.ac.uk\"), person(\"Bill\", \"Venables\", role = \"ctb\"), person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"), person(\"Kurt\", \"Hornik\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"Albrecht\", \"Gebhardt\", role = \"trl\", comment = \"partial port ca 1998\"), person(\"David\", \"Firth\", role = \"ctb\"))",
"Description": "Functions and datasets to support Venables and Ripley, \"Modern Applied Statistics with S\" (4th edition, 2002).",
"Title": "Support Functions and Datasets for Venables and Ripley's MASS",
"LazyData": "yes",
"ByteCompile": "yes",
"License": "GPL-2 | GPL-3",
"URL": "http://www.stats.ox.ac.uk/pub/MASS4/",
"Contact": "<MASS@stats.ox.ac.uk>",
"NeedsCompilation": "yes",
"Author": "Brian Ripley [aut, cre, cph], Bill Venables [ctb], Douglas M. Bates [ctb], Kurt Hornik [trl] (partial port ca 1998), Albrecht Gebhardt [trl] (partial port ca 1998), David Firth [ctb]",
"Maintainer": "Brian Ripley <ripley@stats.ox.ac.uk>",
"Repository": "CRAN"
},
"Matrix": {
"Package": "Matrix",
"Version": "1.7-0",
"Source": "Repository",
"VersionNote": "do also bump src/version.h, inst/include/Matrix/version.h",
"Date": "2024-03-16",
"Priority": "recommended",
"Title": "Sparse and Dense Matrix Classes and Methods",
"Description": "A rich hierarchy of sparse and dense matrix classes, including general, symmetric, triangular, and diagonal matrices with numeric, logical, or pattern entries. Efficient methods for operating on such matrices, often wrapping the 'BLAS', 'LAPACK', and 'SuiteSparse' libraries.",
"License": "GPL (>= 2) | file LICENCE",
"URL": "https://Matrix.R-forge.R-project.org",
"BugReports": "https://R-forge.R-project.org/tracker/?atid=294&group_id=61",
"Contact": "Matrix-authors@R-project.org",
"Authors@R": "c(person(\"Douglas\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"), email = \"mmaechler+Matrix@gmail.com\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Mikael\", \"Jagan\", role = \"aut\", comment = c(ORCID = \"0000-0002-3542-2938\")), person(\"Timothy A.\", \"Davis\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7614-6899\", \"SuiteSparse libraries\", \"collaborators listed in dir(system.file(\\\"doc\\\", \\\"SuiteSparse\\\", package=\\\"Matrix\\\"), pattern=\\\"License\\\", full.names=TRUE, recursive=TRUE)\")), person(\"George\", \"Karypis\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2753-1437\", \"METIS library\", \"Copyright: Regents of the University of Minnesota\")), person(\"Jason\", \"Riedy\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4345-4200\", \"GNU Octave's condest() and onenormest()\", \"Copyright: Regents of the University of California\")), person(\"Jens\", \"Oehlschlägel\", role = \"ctb\", comment = \"initial nearPD()\"), person(\"R Core Team\", role = \"ctb\", comment = \"base R's matrix implementation\"))",
"Depends": [
"R (>= 4.4.0)",
"methods"
],
"Imports": [
"grDevices",
"graphics",
"grid",
"lattice",
"stats",
"utils"
],
"Suggests": [
"MASS",
"datasets",
"sfsmisc",
"tools"
],
"Enhances": [
"SparseM",
"graph"
],
"LazyData": "no",
"LazyDataNote": "not possible, since we use data/*.R and our S4 classes",
"BuildResaveData": "no",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Douglas Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Martin Maechler [aut, cre] (<https://orcid.org/0000-0002-8685-9910>), Mikael Jagan [aut] (<https://orcid.org/0000-0002-3542-2938>), Timothy A. Davis [ctb] (<https://orcid.org/0000-0001-7614-6899>, SuiteSparse libraries, collaborators listed in dir(system.file(\"doc\", \"SuiteSparse\", package=\"Matrix\"), pattern=\"License\", full.names=TRUE, recursive=TRUE)), George Karypis [ctb] (<https://orcid.org/0000-0003-2753-1437>, METIS library, Copyright: Regents of the University of Minnesota), Jason Riedy [ctb] (<https://orcid.org/0000-0002-4345-4200>, GNU Octave's condest() and onenormest(), Copyright: Regents of the University of California), Jens Oehlschlägel [ctb] (initial nearPD()), R Core Team [ctb] (base R's matrix implementation)",
"Maintainer": "Martin Maechler <mmaechler+Matrix@gmail.com>",
"Repository": "CRAN"
},
"MatrixModels": {
"Package": "MatrixModels",
"Version": "0.5-4",
"Source": "Repository",
"VersionNote": "Released 0.5-3 on 2023-11-06",
"Date": "2025-03-25",
"Title": "Modelling with Sparse and Dense Matrices",
"Contact": "Matrix-authors@R-project.org",
"Authors@R": "c( person(\"Douglas\", \"Bates\", role = \"aut\", email = \"bates@stat.wisc.edu\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"), email = \"mmaechler+Matrix@gmail.com\", comment = c(ORCID = \"0000-0002-8685-9910\")))",
"Description": "Generalized Linear Modelling with sparse and dense 'Matrix' matrices, using modular prediction and response module classes.",
"Depends": [
"R (>= 3.6.0)"
],
"Imports": [
"stats",
"methods",
"Matrix (>= 1.6-0)",
"Matrix(< 1.8-0)"
],
"ImportsNote": "_not_yet_stats4",
"Encoding": "UTF-8",
"LazyLoad": "yes",
"License": "GPL (>= 2)",
"URL": "https://Matrix.R-forge.R-project.org/, https://r-forge.r-project.org/R/?group_id=61",
"BugReports": "https://R-forge.R-project.org/tracker/?func=add&atid=294&group_id=61",
"NeedsCompilation": "no",
"Author": "Douglas Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Martin Maechler [aut, cre] (<https://orcid.org/0000-0002-8685-9910>)",
"Maintainer": "Martin Maechler <mmaechler+Matrix@gmail.com>",
"Repository": "CRAN"
},
"OpenML": {
"Package": "OpenML",
"Version": "1.12",
"Source": "Repository",
"Title": "Open Machine Learning and Open Data Platform",
"Description": "We provide an R interface to 'OpenML.org' which is an online machine learning platform where researchers can access open data, download and upload data sets, share their machine learning tasks and experiments and organize them online to work and collaborate with other researchers. The R interface allows to query for data sets with specific properties, and allows the downloading and uploading of data sets, tasks, flows and runs. See <https://www.openml.org/guide/api> for more information.",
"Author": "Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>, Bernd Bischl <bernd_bischl@gmx.net>, Dominik Kirchhoff <dom.kirchhoff@gmail.com>, Michel Lang <michellang@gmail.com>, Benjamin Hofner <benjamin.hofner@fau.de>, Jakob Bossek <j.bossek@gmail.com>, Pascal Kerschke <kerschke@uni-muenster.de>, Joaquin Vanschoren <joaquin.vanschoren@gmail.com>",
"Maintainer": "Giuseppe Casalicchio <giuseppe.casalicchio@stat.uni-muenchen.de>",
"License": "BSD_3_clause + file LICENSE",
"URL": "https://github.com/openml/openml-r",
"BugReports": "https://github.com/openml/openml-r/issues",
"Depends": [
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],
"Suggests": [
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"mlr (>= 2.15)",
"ParamHelpers (>= 1.10)",
"randomForest",
"rpart",
"RWeka",
"xml2",
"farff",
"knitr",
"rmarkdown",
"R.rsp",
"rex"
],
"Imports": [
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"BBmisc (>= 1.11)",
"checkmate (>= 1.8.2)",
"data.table",
"digest",
"httr (>= 1.4.1)",
"stringi",
"XML",
"jsonlite",
"memoise (>= 1.0.0)",
"stats",
"curl (>= 4.1)"
],
"ByteCompile": "yes",
"RoxygenNote": "7.2.1",
"VignetteBuilder": "R.rsp",
"Encoding": "UTF-8",
"Config/testthat/edition": "3",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"PoisNor": {
"Package": "PoisNor",
"Version": "1.3.3",
"Source": "Repository",
"Type": "Package",
"Title": "Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals",
"Date": "2021-03-21",
"Author": "Anup Amatya, Hakan Demirtas, Ran Gao",
"Maintainer": "Ran Gao <rgao8@uic.edu>",
"Depends": [
"mvtnorm",
"corpcor",
"Matrix"
],
"Description": "Generates multivariate data with count and continuous variables with a pre-specified correlation matrix. The count and continuous variables are assumed to have Poisson and normal marginals, respectively. The data generation mechanism is a combination of the normal to anything principle and a connection between Poisson and normal correlations in the mixture. The details of the method are explained in Yahav et al. (2012) <DOI:10.1002/asmb.901>.",
"License": "GPL-2",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"R6": {
"Package": "R6",
"Version": "2.6.1",
"Source": "Repository",
"Title": "Encapsulated Classes with Reference Semantics",
"Authors@R": "c( person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )",
"Description": "Creates classes with reference semantics, similar to R's built-in reference classes. Compared to reference classes, R6 classes are simpler and lighter-weight, and they are not built on S4 classes so they do not require the methods package. These classes allow public and private members, and they support inheritance, even when the classes are defined in different packages.",
"License": "MIT + file LICENSE",
"URL": "https://r6.r-lib.org, https://github.com/r-lib/R6",
"BugReports": "https://github.com/r-lib/R6/issues",
"Depends": [
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],
"Suggests": [
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"testthat (>= 3.0.0)"
],
"Config/Needs/website": "tidyverse/tidytemplate, ggplot2, microbenchmark, scales",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"RoxygenNote": "7.3.2",
"NeedsCompilation": "no",
"Author": "Winston Chang [aut, cre], Posit Software, PBC [cph, fnd]",
"Maintainer": "Winston Chang <winston@posit.co>",
"Repository": "CRAN"
},
"RColorBrewer": {
"Package": "RColorBrewer",
"Version": "1.1-3",
"Source": "Repository",
"Date": "2022-04-03",
"Title": "ColorBrewer Palettes",
"Authors@R": "c(person(given = \"Erich\", family = \"Neuwirth\", role = c(\"aut\", \"cre\"), email = \"erich.neuwirth@univie.ac.at\"))",
"Author": "Erich Neuwirth [aut, cre]",
"Maintainer": "Erich Neuwirth <erich.neuwirth@univie.ac.at>",
"Depends": [
"R (>= 2.0.0)"
],
"Description": "Provides color schemes for maps (and other graphics) designed by Cynthia Brewer as described at http://colorbrewer2.org.",
"License": "Apache License 2.0",
"NeedsCompilation": "no",
"Repository": "CRAN"
},
"Rcpp": {
"Package": "Rcpp",
"Version": "1.0.14",
"Source": "Repository",
"Title": "Seamless R and C++ Integration",
"Date": "2025-01-11",
"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"JJ\", \"Allaire\", role = \"aut\", comment = c(ORCID = \"0000-0003-0174-9868\")), person(\"Kevin\", \"Ushey\", role = \"aut\", comment = c(ORCID = \"0000-0003-2880-7407\")), person(\"Qiang\", \"Kou\", role = \"aut\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Nathan\", \"Russell\", role = \"aut\"), person(\"Iñaki\", \"Ucar\", role = \"aut\", comment = c(ORCID = \"0000-0001-6403-5550\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"John\", \"Chambers\", role = \"aut\"))",
"Description": "The 'Rcpp' package provides R functions as well as C++ classes which offer a seamless integration of R and C++. Many R data types and objects can be mapped back and forth to C++ equivalents which facilitates both writing of new code as well as easier integration of third-party libraries. Documentation about 'Rcpp' is provided by several vignettes included in this package, via the 'Rcpp Gallery' site at <https://gallery.rcpp.org>, the paper by Eddelbuettel and Francois (2011, <doi:10.18637/jss.v040.i08>), the book by Eddelbuettel (2013, <doi:10.1007/978-1-4614-6868-4>) and the paper by Eddelbuettel and Balamuta (2018, <doi:10.1080/00031305.2017.1375990>); see 'citation(\"Rcpp\")' for details.",
"Imports": [
"methods",
"utils"
],
"Suggests": [
"tinytest",
"inline",
"rbenchmark",
"pkgKitten (>= 0.1.2)"
],
"URL": "https://www.rcpp.org, https://dirk.eddelbuettel.com/code/rcpp.html, https://github.com/RcppCore/Rcpp",
"License": "GPL (>= 2)",
"BugReports": "https://github.com/RcppCore/Rcpp/issues",
"MailingList": "rcpp-devel@lists.r-forge.r-project.org",
"RoxygenNote": "6.1.1",
"Encoding": "UTF-8",
"NeedsCompilation": "yes",
"Author": "Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), JJ Allaire [aut] (<https://orcid.org/0000-0003-0174-9868>), Kevin Ushey [aut] (<https://orcid.org/0000-0003-2880-7407>), Qiang Kou [aut] (<https://orcid.org/0000-0001-6786-5453>), Nathan Russell [aut], Iñaki Ucar [aut] (<https://orcid.org/0000-0001-6403-5550>), Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), John Chambers [aut]",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN"
},
"RcppArmadillo": {
"Package": "RcppArmadillo",
"Version": "14.4.1-1",
"Source": "Repository",
"Type": "Package",
"Title": "'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library",
"Date": "2025-03-27",
"Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Binxiang\", \"Ni\", role = \"aut\"), person(\"Conrad\", \"Sanderson\", role = \"aut\", comment = c(ORCID = \"0000-0002-0049-4501\")))",
"Description": "'Armadillo' is a templated C++ linear algebra library (by Conrad Sanderson) that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the header files from the templated 'Armadillo' library. Thus users do not need to install 'Armadillo' itself in order to use 'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.",
"License": "GPL (>= 2)",
"LazyLoad": "yes",
"Depends": [
"R (>= 3.3.0)"
],
"LinkingTo": [
"Rcpp"
],
"Imports": [
"Rcpp (>= 1.0.12)",
"stats",
"utils",
"methods"
],
"Suggests": [
"tinytest",
"Matrix (>= 1.3.0)",
"pkgKitten",
"reticulate",
"slam"
],
"URL": "https://github.com/RcppCore/RcppArmadillo, https://dirk.eddelbuettel.com/code/rcpp.armadillo.html",
"BugReports": "https://github.com/RcppCore/RcppArmadillo/issues",
"RoxygenNote": "6.0.1",
"NeedsCompilation": "yes",
"Author": "Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Binxiang Ni [aut], Conrad Sanderson [aut] (<https://orcid.org/0000-0002-0049-4501>)",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN"
},
"RcppEigen": {
"Package": "RcppEigen",
"Version": "0.3.4.0.2",
"Source": "Repository",
"Type": "Package",
"Title": "'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library",
"Date": "2024-08-23",
"Authors@R": "c(person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Yixuan\", \"Qiu\", role = \"aut\", comment = c(ORCID = \"0000-0003-0109-6692\")), person(\"Authors of\", \"Eigen\", role = \"cph\", comment = \"Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS\"))",
"Copyright": "See the file COPYRIGHTS for various Eigen copyright details",
"Description": "R and 'Eigen' integration using 'Rcpp'. 'Eigen' is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It supports dense and sparse matrices on integer, floating point and complex numbers, decompositions of such matrices, and solutions of linear systems. Its performance on many algorithms is comparable with some of the best implementations based on 'Lapack' and level-3 'BLAS'. The 'RcppEigen' package includes the header files from the 'Eigen' C++ template library. Thus users do not need to install 'Eigen' itself in order to use 'RcppEigen'. Since version 3.1.1, 'Eigen' is licensed under the Mozilla Public License (version 2); earlier version were licensed under the GNU LGPL version 3 or later. 'RcppEigen' (the 'Rcpp' bindings/bridge to 'Eigen') is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.",
"License": "GPL (>= 2) | file LICENSE",
"LazyLoad": "yes",
"Depends": [
"R (>= 3.6.0)"
],
"LinkingTo": [
"Rcpp"
],
"Imports": [
"Rcpp (>= 0.11.0)",
"stats",
"utils"
],
"Suggests": [
"Matrix",
"inline",
"tinytest",
"pkgKitten",
"microbenchmark"
],
"URL": "https://github.com/RcppCore/RcppEigen, https://dirk.eddelbuettel.com/code/rcpp.eigen.html",
"BugReports": "https://github.com/RcppCore/RcppEigen/issues",
"NeedsCompilation": "yes",
"Author": "Doug Bates [aut] (<https://orcid.org/0000-0001-8316-9503>), Dirk Eddelbuettel [aut, cre] (<https://orcid.org/0000-0001-6419-907X>), Romain Francois [aut] (<https://orcid.org/0000-0002-2444-4226>), Yixuan Qiu [aut] (<https://orcid.org/0000-0003-0109-6692>), Authors of Eigen [cph] (Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS)",
"Maintainer": "Dirk Eddelbuettel <edd@debian.org>",
"Repository": "CRAN"
},
"Rdpack": {
"Package": "Rdpack",
"Version": "2.6.3",
"Source": "Repository",
"Type": "Package",
"Title": "Update and Manipulate Rd Documentation Objects",
"Authors@R": "c( person(given = c(\"Georgi\", \"N.\"), family = \"Boshnakov\", role = c(\"aut\", \"cre\"), email = \"georgi.boshnakov@manchester.ac.uk\", comment = c(ORCID = \"0000-0003-2839-346X\")), person(given = \"Duncan\", family = \"Murdoch\", role = \"ctb\", email = \"murdoch.duncan@gmail.com\") )",
"Description": "Functions for manipulation of R documentation objects, including functions reprompt() and ereprompt() for updating 'Rd' documentation for functions, methods and classes; 'Rd' macros for citations and import of references from 'bibtex' files for use in 'Rd' files and 'roxygen2' comments; 'Rd' macros for evaluating and inserting snippets of 'R' code and the results of its evaluation or creating graphics on the fly; and many functions for manipulation of references and Rd files.",
"URL": "https://geobosh.github.io/Rdpack/ (doc), https://github.com/GeoBosh/Rdpack (devel)",
"BugReports": "https://github.com/GeoBosh/Rdpack/issues",
"Depends": [
"R (>= 2.15.0)",
"methods"
],
"Imports": [
"tools",
"utils",
"rbibutils (>= 1.3)"
],
"Suggests": [
"grDevices",
"testthat",
"rstudioapi",
"rprojroot",
"gbRd"
],
"License": "GPL (>= 2)",
"LazyLoad": "yes",
"RoxygenNote": "7.1.1",
"NeedsCompilation": "no",
"Author": "Georgi N. Boshnakov [aut, cre] (<https://orcid.org/0000-0003-2839-346X>), Duncan Murdoch [ctb]",
"Maintainer": "Georgi N. Boshnakov <georgi.boshnakov@manchester.ac.uk>",
"Repository": "CRAN"
},
"RefManageR": {
"Package": "RefManageR",
"Version": "1.4.0",
"Source": "Repository",
"Title": "Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management",
"Authors@R": "person(c(\"Mathew\", \"W.\"), \"McLean\", role = c(\"aut\", \"cre\"), email = \"mathew.w.mclean@gmail.com\", comment = c(ORCID = \"0000-0002-7891-9645\"))",
"Maintainer": "Mathew W. McLean <mathew.w.mclean@gmail.com>",
"Description": "Provides tools for importing and working with bibliographic references. It greatly enhances the 'bibentry' class by providing a class 'BibEntry' which stores 'BibTeX' and 'BibLaTeX' references, supports 'UTF-8' encoding, and can be easily searched by any field, by date ranges, and by various formats for name lists (author by last names, translator by full names, etc.). Entries can be updated, combined, sorted, printed in a number of styles, and exported. 'BibTeX' and 'BibLaTeX' '.bib' files can be read into 'R' and converted to 'BibEntry' objects. Interfaces to 'NCBI Entrez', 'CrossRef', and 'Zotero' are provided for importing references and references can be created from locally stored 'PDF' files using 'Poppler'. Includes functions for citing and generating a bibliography with hyperlinks for documents prepared with 'RMarkdown' or 'RHTML'.",
"License": "GPL-2 | GPL-3 | BSD_3_clause + file LICENSE",
"Imports": [
"xml2",
"jsonlite",
"utils",
"plyr",
"tools",
"httr",
"lubridate (>= 1.5.0)",
"stringr",
"methods",
"bibtex (>= 0.4.1)"
],
"Suggests": [
"knitr",
"markdown",
"testthat"
],
"Encoding": "UTF-8",
"Depends": [
"R (>= 3.0)"
],
"VignetteBuilder": "knitr",
"BugReports": "https://github.com/ropensci/RefManageR/issues",
"URL": "https://github.com/ropensci/RefManageR/",
"RoxygenNote": "7.2.1",
"NeedsCompilation": "no",
"Author": "Mathew W. McLean [aut, cre] (<https://orcid.org/0000-0002-7891-9645>)",
"Repository": "CRAN"
},
"SparseM": {
"Package": "SparseM",
"Version": "1.84-2",
"Source": "Repository",
"Authors@R": "c( person(\"Roger\", \"Koenker\", role = c(\"cre\",\"aut\"), email = \"rkoenker@uiuc.edu\"), person(c(\"Pin\", \"Tian\"), \"Ng\", role = c(\"ctb\"), comment = \"Contributions to Sparse QR code\", email = \"pin.ng@nau.edu\") , person(\"Yousef\", \"Saad\", role = c(\"ctb\"), comment = \"author of sparskit2\") , person(\"Ben\", \"Shaby\", role = c(\"ctb\"), comment = \"author of chol2csr\") , person(\"Martin\", \"Maechler\", role = \"ctb\", comment = c(\"chol() tweaks; S4\", ORCID = \"0000-0002-8685-9910\")) )",
"Maintainer": "Roger Koenker <rkoenker@uiuc.edu>",
"Depends": [
"R (>= 2.15)",
"methods"
],
"Imports": [
"graphics",
"stats",
"utils"
],
"VignetteBuilder": "knitr",
"Suggests": [
"knitr"
],
"Description": "Some basic linear algebra functionality for sparse matrices is provided: including Cholesky decomposition and backsolving as well as standard R subsetting and Kronecker products.",
"License": "GPL (>= 2)",
"Title": "Sparse Linear Algebra",
"URL": "http://www.econ.uiuc.edu/~roger/research/sparse/sparse.html",
"NeedsCompilation": "yes",
"Author": "Roger Koenker [cre, aut], Pin Tian Ng [ctb] (Contributions to Sparse QR code), Yousef Saad [ctb] (author of sparskit2), Ben Shaby [ctb] (author of chol2csr), Martin Maechler [ctb] (chol() tweaks; S4, <https://orcid.org/0000-0002-8685-9910>)",
"Repository": "CRAN"
},
"UpSetR": {
"Package": "UpSetR",
"Version": "1.4.0",
"Source": "Repository",
"Title": "A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets",
"Date": "2019-5-9",
"URL": "http://github.com/hms-dbmi/UpSetR",
"BugReports": "http://github.com/hms-dbmi/UpSetR/issues",
"Authors@R": "c( person(\"Jake\", \"Conway\", email = \"jake_conway@hms.harvard.edu\", role = \"cre\"), person(\"Nils\", \"Gehlenborg\", email = \"nils@hms.harvard.edu\", role = \"aut\"))",
"Description": "Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.",
"Depends": [
"R (>= 3.0)"
],
"Imports": [
"ggplot2",
"gridExtra",
"plyr",
"utils",
"stats",
"methods",
"grDevices",
"scales"
],
"License": "MIT + file LICENSE",
"LazyData": "true",
"VignetteBuilder": "knitr",
"Suggests": [
"knitr"
],
"RoxygenNote": "6.1.0",
"NeedsCompilation": "no",
"Author": "Jake Conway [cre], Nils Gehlenborg [aut]",
"Maintainer": "Jake Conway <jake_conway@hms.harvard.edu>",
"Repository": "CRAN"
},
"VIM": {
"Package": "VIM",
"Version": "6.2.2",
"Source": "Repository",
"Title": "Visualization and Imputation of Missing Values",
"Authors@R": "c( person(\"Matthias\", \"Templ\", email = \"matthias.templ@gmail.com\", role = c(\"aut\",\"cre\")), person(\"Alexander\", \"Kowarik\", email = \"alexander.kowarik@statistik.gv.at\", role = c(\"aut\"), comment=c(ORCID=\"0000-0001-8598-4130\")), person(\"Andreas\", \"Alfons\", role = c(\"aut\")), person(\"Gregor\", \"de Cillia\", email = \"gregor.decillia@statistik.gv.at\", role = c(\"aut\")), person(\"Bernd\", \"Prantner\", role = c(\"ctb\")), person(\"Wolfgang\", \"Rannetbauer\", role = c(\"aut\")))",
"Depends": [
"R (>= 3.5.0)",
"colorspace",
"grid"
],
"Imports": [
"car",
"grDevices",
"magrittr",
"robustbase",
"stats",
"sp",
"vcd",
"MASS",
"nnet",
"e1071",
"methods",
"Rcpp",
"utils",
"graphics",
"laeken",
"ranger",
"data.table(>= 1.9.4)"
],
"Suggests": [
"dplyr",
"tinytest",
"knitr",
"rmarkdown",
"reactable",
"covr",
"withr"
],
"Description": "New tools for the visualization of missing and/or imputed values are introduced, which can be used for exploring the data and the structure of the missing and/or imputed values. Depending on this structure of the missing values, the corresponding methods may help to identify the mechanism generating the missing values and allows to explore the data including missing values. In addition, the quality of imputation can be visually explored using various univariate, bivariate, multiple and multivariate plot methods. A graphical user interface available in the separate package VIMGUI allows an easy handling of the implemented plot methods.",
"LazyData": "TRUE",
"ByteCompile": "TRUE",
"License": "GPL (>= 2)",
"URL": "https://github.com/statistikat/VIM",
"Repository": "CRAN",
"LinkingTo": [
"Rcpp"
],
"RoxygenNote": "7.1.2",
"Encoding": "UTF-8",
"VignetteBuilder": "knitr",
"NeedsCompilation": "yes",
"Author": "Matthias Templ [aut, cre], Alexander Kowarik [aut] (<https://orcid.org/0000-0001-8598-4130>), Andreas Alfons [aut], Gregor de Cillia [aut], Bernd Prantner [ctb], Wolfgang Rannetbauer [aut]",
"Maintainer": "Matthias Templ <matthias.templ@gmail.com>"
},
"XML": {
"Package": "XML",
"Version": "3.99-0.18",
"Source": "Repository",
"Authors@R": "c(person(\"CRAN Team\", role = c('ctb', 'cre'), email = \"CRAN@r-project.org\", comment = \"de facto maintainer since 2013\"), person(\"Duncan\", \"Temple Lang\", role = c(\"aut\"), email = \"duncan@r-project.org\", comment = c(ORCID = \"0000-0003-0159-1546\")), person(\"Tomas\", \"Kalibera\", role = \"ctb\"))",
"Title": "Tools for Parsing and Generating XML Within R and S-Plus",
"Depends": [
"R (>= 4.0.0)",
"methods",
"utils"
],
"Suggests": [
"bitops",
"RCurl"
],
"SystemRequirements": "libxml2 (>= 2.6.3)",
"Description": "Many approaches for both reading and creating XML (and HTML) documents (including DTDs), both local and accessible via HTTP or FTP. Also offers access to an 'XPath' \"interpreter\".",
"URL": "https://www.omegahat.net/RSXML/",
"License": "BSD_3_clause + file LICENSE",
"Collate": "AAA.R DTD.R DTDClasses.R DTDRef.R SAXMethods.R XMLClasses.R applyDOM.R assignChild.R catalog.R createNode.R dynSupports.R error.R flatTree.R nodeAccessors.R parseDTD.R schema.R summary.R tangle.R toString.R tree.R version.R xmlErrorEnums.R xmlEventHandler.R xmlEventParse.R xmlHandler.R xmlInternalSource.R xmlOutputDOM.R xmlNodes.R xmlOutputBuffer.R xmlTree.R xmlTreeParse.R htmlParse.R hashTree.R zzz.R supports.R parser.R libxmlFeatures.R xmlString.R saveXML.R namespaces.R readHTMLTable.R reflection.R xmlToDataFrame.R bitList.R compare.R encoding.R fixNS.R xmlRoot.R serialize.R xmlMemoryMgmt.R keyValueDB.R solrDocs.R XMLRErrorInfo.R xincludes.R namespaceHandlers.R tangle1.R htmlLinks.R htmlLists.R getDependencies.R getRelativeURL.R xmlIncludes.R simplifyPath.R",
"NeedsCompilation": "yes",
"Author": "CRAN Team [ctb, cre] (de facto maintainer since 2013), Duncan Temple Lang [aut] (<https://orcid.org/0000-0003-0159-1546>), Tomas Kalibera [ctb]",
"Maintainer": "CRAN Team <CRAN@r-project.org>",
"Repository": "CRAN"
},
"abind": {
"Package": "abind",
"Version": "1.4-8",
"Source": "Repository",
"Date": "2024-09-08",
"Title": "Combine Multidimensional Arrays",
"Authors@R": "c(person(\"Tony\", \"Plate\", email = \"tplate@acm.org\", role = c(\"aut\", \"cre\")), person(\"Richard\", \"Heiberger\", role = c(\"aut\")))",
"Maintainer": "Tony Plate <tplate@acm.org>",
"Description": "Combine multidimensional arrays into a single array. This is a generalization of 'cbind' and 'rbind'. Works with vectors, matrices, and higher-dimensional arrays (aka tensors). Also provides functions 'adrop', 'asub', and 'afill' for manipulating, extracting and replacing data in arrays.",
"Depends": [
"R (>= 1.5.0)"
],
"Imports": [
"methods",
"utils"
],
"License": "MIT + file LICENSE",
"NeedsCompilation": "no",
"Author": "Tony Plate [aut, cre], Richard Heiberger [aut]",
"Repository": "CRAN"
},
"askpass": {
"Package": "askpass",
"Version": "1.2.1",
"Source": "Repository",
"Type": "Package",
"Title": "Password Entry Utilities for R, Git, and SSH",
"Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))",
"Description": "Cross-platform utilities for prompting the user for credentials or a passphrase, for example to authenticate with a server or read a protected key. Includes native programs for MacOS and Windows, hence no 'tcltk' is required. Password entry can be invoked in two different ways: directly from R via the askpass() function, or indirectly as password-entry back-end for 'ssh-agent' or 'git-credential' via the SSH_ASKPASS and GIT_ASKPASS environment variables. Thereby the user can be prompted for credentials or a passphrase if needed when R calls out to git or ssh.",
"License": "MIT + file LICENSE",
"URL": "https://r-lib.r-universe.dev/askpass",
"BugReports": "https://github.com/r-lib/askpass/issues",
"Encoding": "UTF-8",
"Imports": [
"sys (>= 2.1)"
],
"RoxygenNote": "7.2.3",
"Suggests": [
"testthat"
],
"Language": "en-US",
"NeedsCompilation": "yes",
"Author": "Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)",
"Maintainer": "Jeroen Ooms <jeroenooms@gmail.com>",
"Repository": "CRAN"
},
"backports": {
"Package": "backports",
"Version": "1.5.0",
"Source": "Repository",
"Type": "Package",
"Title": "Reimplementations of Functions Introduced Since R-3.0.0",
"Authors@R": "c( person(\"Michel\", \"Lang\", NULL, \"michellang@gmail.com\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Duncan\", \"Murdoch\", NULL, \"murdoch.duncan@gmail.com\", role = c(\"aut\")), person(\"R Core Team\", role = \"aut\"))",
"Maintainer": "Michel Lang <michellang@gmail.com>",
"Description": "Functions introduced or changed since R v3.0.0 are re-implemented in this package. The backports are conditionally exported in order to let R resolve the function name to either the implemented backport, or the respective base version, if available. Package developers can make use of new functions or arguments by selectively importing specific backports to support older installations.",
"URL": "https://github.com/r-lib/backports",
"BugReports": "https://github.com/r-lib/backports/issues",
"License": "GPL-2 | GPL-3",
"NeedsCompilation": "yes",
"ByteCompile": "yes",
"Depends": [
"R (>= 3.0.0)"
],
"Encoding": "UTF-8",
"RoxygenNote": "7.3.1",
"Author": "Michel Lang [cre, aut] (<https://orcid.org/0000-0001-9754-0393>), Duncan Murdoch [aut], R Core Team [aut]",
"Repository": "CRAN"
},
"base64enc": {
"Package": "base64enc",
"Version": "0.1-3",
"Source": "Repository",
"Title": "Tools for base64 encoding",
"Author": "Simon Urbanek <Simon.Urbanek@r-project.org>",
"Maintainer": "Simon Urbanek <Simon.Urbanek@r-project.org>",
"Depends": [
"R (>= 2.9.0)"
],
"Enhances": [
"png"
],
"Description": "This package provides tools for handling base64 encoding. It is more flexible than the orphaned base64 package.",
"License": "GPL-2 | GPL-3",
"URL": "http://www.rforge.net/base64enc",
"NeedsCompilation": "yes",
"Repository": "CRAN"
},
"bibtex": {
"Package": "bibtex",
"Version": "0.5.1",
"Source": "Repository",
"Title": "Bibtex Parser",
"Authors@R": "c( person(given = \"Romain\", family = \"Francois\", role = c(\"aut\", \"cph\"), email = \"romain@purrple.cat\", comment = c(ORCID = \"0000-0002-2444-4226\", \"principal developer of bibtex R package\")), person(given = c(\"James\", \"Joseph\"), family = \"Balamuta\", role = c(\"ctb\", \"cre\"), email = \"balamut2@illinois.edu\", comment = c(ORCID = \"0000-0003-2826-8458\")), person(given = \"Diego\", family = \"Hernangómez\", role = c(\"aut\"), email = \"diego.hernangomezherrero@gmail.com\", comment = c(ORCID = \"0000-0001-8457-4658\")), person(given = \"Scott\", family = \"Chamberlain\", role = c(\"ctb\"), email = \"myrmecocystus@gmail.com\", comment = c(ORCID = \"0000-0003-1444-9135\")), person(given = \"Kurt\", family = \"Hornik\", role = \"ctb\", email = \"Kurt.Hornik@R-project.org\", comment = c(ORCID = \"0000-0003-4198-9911\")), person(given = \"Brian\", family = \"Ripley\", role = \"ctb\", email = \"ripley@stats.ox.ac.uk\", comment = \"compilation fixes\"), person(given = \"Michael\", family = \"Koohafkan\", role = \"ctb\", email = \"michael.koohafkan@gmail.com\"), person(given = c(\"Mathew\", \"W.\"), family = \"McLean\", role = \"ctb\", email = \"mathew.w.mclean@gmail.com\", comment = c(ORCID = \"0000-0002-7891-9645\") ) )",
"Description": "Utility to parse a bibtex file.",
"BugReports": "https://github.com/ropensci/bibtex/issues",
"URL": "https://github.com/ropensci/bibtex, https://docs.ropensci.org/bibtex/",
"License": "GPL (>= 2)",
"Depends": [
"R (>= 3.0.2)"
],
"Imports": [
"backports (>= 1.4.0)",
"utils"
],
"Suggests": [
"testthat (>= 3.0.0)"
],
"LazyLoad": "yes",
"Encoding": "UTF-8",
"RoxygenNote": "7.2.3",
"Config/testthat/edition": "3",
"NeedsCompilation": "no",
"Author": "Romain Francois [aut, cph] (<https://orcid.org/0000-0002-2444-4226>, principal developer of bibtex R package), James Joseph Balamuta [ctb, cre] (<https://orcid.org/0000-0003-2826-8458>), Diego Hernangómez [aut] (<https://orcid.org/0000-0001-8457-4658>), Scott Chamberlain [ctb] (<https://orcid.org/0000-0003-1444-9135>), Kurt Hornik [ctb] (<https://orcid.org/0000-0003-4198-9911>), Brian Ripley [ctb] (compilation fixes), Michael Koohafkan [ctb], Mathew W. McLean [ctb] (<https://orcid.org/0000-0002-7891-9645>)",
"Maintainer": "James Joseph Balamuta <balamut2@illinois.edu>",
"Repository": "CRAN"
},
"bindata": {
"Package": "bindata",
"Version": "0.9-22",
"Source": "Repository",
"Date": "2024-12-30",
"Title": "Generation of Artificial Binary Data",
"Authors@R": "c(person(\"Friedrich\", \"Leisch\", role = c(\"aut\"), comment = c(ORCID = \"0000-0001-7278-1983\", \"maintainer up to 2024\")), person(\"Andreas\", \"Weingessel\", role = \"aut\"), person(\"Kurt\", \"Hornik\", role = c(\"aut\", \"cre\"), email = \"Kurt.Hornik@R-project.org\", comment = c(ORCID = \"0000-0003-4198-9911\")))",
"Description": "Generation of correlated artificial binary data.",
"License": "GPL-2",
"Imports": [
"e1071",
"mvtnorm (>= 0.7-0)"
],
"NeedsCompilation": "no",
"Author": "Friedrich Leisch [aut] (<https://orcid.org/0000-0001-7278-1983>, maintainer up to 2024), Andreas Weingessel [aut], Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>)",
"Maintainer": "Kurt Hornik <Kurt.Hornik@R-project.org>",
"Depends": [
"R (>= 2.10)"
],
"Repository": "CRAN"
},
"bit": {
"Package": "bit",
"Version": "4.6.0",
"Source": "Repository",
"Title": "Classes and Methods for Fast Memory-Efficient Boolean Selections",
"Authors@R": "c( person(\"Michael\", \"Chirico\", email = \"MichaelChirico4@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Jens\", \"Oehlschlägel\", role = \"aut\"), person(\"Brian\", \"Ripley\", role = \"ctb\") )",
"Depends": [
"R (>= 3.4.0)"
],
"Suggests": [
"testthat (>= 3.0.0)",
"roxygen2",
"knitr",
"markdown",
"rmarkdown",
"microbenchmark",
"bit64 (>= 4.0.0)",
"ff (>= 4.0.0)"
],
"Description": "Provided are classes for boolean and skewed boolean vectors, fast boolean methods, fast unique and non-unique integer sorting, fast set operations on sorted and unsorted sets of integers, and foundations for ff (range index, compression, chunked processing).",
"License": "GPL-2 | GPL-3",
"LazyLoad": "yes",
"ByteCompile": "yes",