Skip to content

README.md

Latest commit

 

History

History
68 lines (50 loc) · 1.34 KB

README.md

File metadata and controls

68 lines (50 loc) · 1.34 KB

CMP Viewer (v1.5.2)

A cross-platform tool for visualizing and analyzing multidimensional images with clustering capabilities, written in Python.

CMPViewer Team: Rebecca Pfeiffer (Lead contact) Eric Kunz Joyce Wang James Anderson Nat Quayle Nelson

Description

CMP Viewer is a tool for visualizing and analyzing multidimensional images. It provides functionality for loading images, performing clustering operations, and visualizing the results. The application uses PyQt5 for its graphical user interface.

Installation

Using pip

pip install cmp_viewer

From source

git clone https://github.com/yourusername/cmp_viewer.git
cd cmp_viewer
pip install -e .

Usage

After installation, you can run the application using:

cmp-viewer

Or from Python:

from cmp_viewer.__main__ import main
main()

Dependencies

  • numpy (>=2.2.5)
  • PyQt5
  • scikit-learn
  • Pillow (>=11.2.1)
  • opencv-python (for mac install use opencv-python-headless)
  • nornir_imageregistration (from GitHub)
  • nornir_shared (from GitHub)
  • nornir_pools (from GitHub)
  • qimage2ndarray
  • matplotlib (>=3.10.3)
  • scipy (>=1.15.3)
  • scikit-image (>=0.25.2)
  • imageio (>=2.37.0)
  • tifffile (>=2025.5.10)
  • networkx (>=3.4.2)
  • pydantic (>=2.11.4)

License

This project is licensed under the MIT License - see the LICENSE file for details.