projectGraphBuilder: Fix check for already qualified application projects

If the already qualified project is visited again, it should not be
skipped but handled like any other duplicate. This change is mainly to
prevent the irritating log message indicating that the same project
already qualified as the application project but is ignored.

Author: RandomByte

lib/graph/ProjectGraph.js

@@ -60,6 +60,7 @@ class ProjectGraph {
 			throw new Error(
 				`Failed to add project ${projectName} to graph: Project name must not be integer-like`);
 		}
+		log.verbose(`Adding project: ${projectName}`);
 		this._projects[projectName] = project;
 		this._adjList[projectName] = [];
 		this._optAdjList[projectName] = [];

lib/graph/projectGraphBuilder.js

@@ -199,12 +199,12 @@ module.exports = async function(nodeProvider) {
 					if (!qualifiedApplicationProject) {
 						log.verbose(`Project ${projectName} qualified as application project for project graph`);
 						qualifiedApplicationProject = project;
-					} else if (!(qualifiedApplicationProject.getName() === projectName && node.deduped)) {
+					} else if (qualifiedApplicationProject.getName() !== projectName) {
 						// Project is not a duplicate of an already qualified project (which should
 						// still be processed below), but a unique, additional application project
 
 						// TODO: Should this rather be a verbose logging?
-						//	projectPreprocessor handled this like any project that got ignored for some reason and did a
+						//	projectPreprocessor handled this like any project that got ignored and did a
 						//	(in this case misleading) general verbose logging:
 						//	"Ignoring project with missing configuration"
 						log.info(