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Update MAP with latest Auto SVRTK reconstruction pipeline #10

@tomaroberts

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@tomaroberts

Basically need to:

  • update Dockerfile to pull newest weights
  • Alter SVRTK operator to use new .bash script
  • Check file pathing the same – nb: final file is called reo-SVR-output-brain.nii.gz, which is probably easiest to rename SVR-output.nii.gz for purposes of MAP.

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