From b933c8fab64b7a9e390987ed2676b3bd1c1bad9b Mon Sep 17 00:00:00 2001 From: Andras Lasso Date: Wed, 23 Nov 2022 18:22:26 -0500 Subject: [PATCH 01/33] Update PULL_REQUEST_TEMPLATE.md Require LICENSE.txt in the repository root, recommend MIT and Apache. --- .github/PULL_REQUEST_TEMPLATE.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/PULL_REQUEST_TEMPLATE.md b/.github/PULL_REQUEST_TEMPLATE.md index 447d26eb2..ed8c5b8a2 100644 --- a/.github/PULL_REQUEST_TEMPLATE.md +++ b/.github/PULL_REQUEST_TEMPLATE.md @@ -13,7 +13,7 @@ Thank you for contributing to 3D Slicer! - [ ] Repository is associated with `3d-slicer-extension` GitHub topic so that it is listed [here](https://github.com/topics/3d-slicer-extension). To edit topics, click the settings icon in the right side of "About" section header and enter `3d-slicer-extension` in "Topics" and click "Save changes". To learn more about topics, read https://help.github.com/en/articles/about-topics - [ ] Extension description summarizes in 1-2 sentences what the extension is usable (should be understandable for non-experts) - [ ] Any known related patents must be mentioned in the extension description. -- [ ] If source code license is more restrictive for users than BSD, MIT, Apache, or 3D Slicer license then the name of the used license must be mentioned in the extension description. +- [ ] LICENSE.txt is present in the repository root. MIT (https://choosealicense.com/licenses/mit/) or Apache (https://choosealicense.com/licenses/apache-2.0/) license is recommended. If source code license is more restrictive for users than MIT, BSD, Apache, or 3D Slicer license then the name of the used license must be mentioned in the extension description. - [ ] Extension URL and revision (scmurl, scmrevision) is correct, consider using a branch name (main, release, ...) instead of a specific git has to avoid re-submitting pull request whenever the extension is updated - [ ] Extension icon URL is correct (do not use the icon's webpage but the raw data download URL that you get from the download button - it should look something like this: https://raw.githubusercontent.com/user/repo/main/SomeIcon.png) - [ ] Screenshot URLs (screenshoturls) are correct, contains at least one From f9f606cba9d3f636665ed1ea386946d48c3bf4e3 Mon Sep 17 00:00:00 2001 From: Andras Lasso Date: Fri, 25 Nov 2022 01:09:18 -0500 Subject: [PATCH 02/33] Add TotalSegmentator extension Allows running TotalSegmentator AI segmenter from Slicer. PyTorch and TotalSegmentator are installed in Slicer's Python environment and run natively, without docker. --- TotalSegmentator.s4ext | 44 ++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 TotalSegmentator.s4ext diff --git a/TotalSegmentator.s4ext b/TotalSegmentator.s4ext new file mode 100644 index 000000000..19906198c --- /dev/null +++ b/TotalSegmentator.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager +scm git +scmurl https://github.com/lassoan/SlicerTotalSegmentator +scmrevision main + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends PyTorch + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/lassoan/SlicerTotalSegmentator + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Andras Lasso (PerkLab, Queen's University) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Segmentation + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/lassoan/SlicerTotalSegmentator/main/TotalSegmentator.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description Fully automatic whole-body CT segmentation of 104 structures, using TotalSegmentator AI model. + +# Space separated list of urls +screenshoturls https://raw.githubusercontent.com/lassoan/SlicerTotalSegmentator/main/Screenshot01.jpg + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From bebbaa2ef7c43ee161765725d68e5b12fbe94e25 Mon Sep 17 00:00:00 2001 From: Kylie Keijzer <45228781+kyliekeijzer@users.noreply.github.com> Date: Tue, 20 Dec 2022 14:11:20 +0100 Subject: [PATCH 03/33] Add MUST-segmenter extension (#1895) * Add MUST-segmenter extension * Update MUST-segmenter - repository url - icon url - description - add more screenshot urls - dependencies * Update MUST-segmenter.s4ext --- MUST-segmenter.s4ext | 45 ++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 45 insertions(+) create mode 100644 MUST-segmenter.s4ext diff --git a/MUST-segmenter.s4ext b/MUST-segmenter.s4ext new file mode 100644 index 000000000..cc2c20738 --- /dev/null +++ b/MUST-segmenter.s4ext @@ -0,0 +1,45 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager +scm git +scmurl https://github.com/kyliekeijzer/Slicer-PET-MUST-segmenter.git +scmrevision master + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends SlicerRadiomics + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/kyliekeijzer/Slicer-PET-MUST-segmenter.git + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Kylie Keijzer (University Medical Center Groningen, The Netherlands) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Segmentation + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/Slicer-MUST-segmenter.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description Multiple SUV Thresholding (MUST)-segmenter is a semi-automated PET image segmentation tool that enables delineation of multiple lesions at once, and extracts the lesions' features. + +# Space separated list of urls +screenshoturls https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/screenshots/Slicer-MUST-segmenter_screenshot.png https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/screenshots/9.png https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/screenshots/12.png +https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/screenshots/10.png https://raw.githubusercontent.com/kyliekeijzer/Slicer-PET-MUST-segmenter/master/screenshots/25.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 \ No newline at end of file From c00f7bd6812ccce90cc80821596f2cdc97427f16 Mon Sep 17 00:00:00 2001 From: Xiang Chen Date: Sat, 24 Dec 2022 01:49:31 -0330 Subject: [PATCH 04/33] Update the description in ColocZStats.s4ext Update the description in ColocZStats.s4ext --- ColocZStats.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ColocZStats.s4ext b/ColocZStats.s4ext index 60e225184..40c13c78a 100644 --- a/ColocZStats.s4ext +++ b/ColocZStats.s4ext @@ -34,7 +34,7 @@ iconurl https://raw.githubusercontent.com/ChenXiang96/SlicerColoc-Z-Stats/main/C status # One line stating what the module does -description This is an extension for computing the percentage of colocalization(Spatial overlap between different channels) of Z-stack images. +description This is an extension for computing the proteins' colocalization (Spatial overlap between different channels) metrics of multi-channel Z-stack images. # Space separated list of urls screenshoturls https://raw.githubusercontent.com/ChenXiang96/SlicerColoc-Z-Stats/main/Images/Screenshots.png From dfb9d6e4afcc3c1b04785d211c1d39810aa0869b Mon Sep 17 00:00:00 2001 From: MarinaSandonis <106068754+MarinaSandonis@users.noreply.github.com> Date: Sat, 20 Aug 2022 09:51:38 -0400 Subject: [PATCH 05/33] Update SlicerTissueSegmentation extension Update icon URL and screenshot URLs --- SlicerTissueSegmentation.s4ext | 10 ++++------ 1 file changed, 4 insertions(+), 6 deletions(-) diff --git a/SlicerTissueSegmentation.s4ext b/SlicerTissueSegmentation.s4ext index 81707c78c..cc9e88d8f 100644 --- a/SlicerTissueSegmentation.s4ext +++ b/SlicerTissueSegmentation.s4ext @@ -21,23 +21,21 @@ build_subdirectory . homepage https://github.com/MarinaSandonis/SlicerTissueSegmentation#slicertissuesegmentation # Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) -# For example: -contributors Marina Sandonís Fernández (UPNA), Fernando Idoate Saralegui (Mutua Navarra),Rafael Cabeza Laguna (UPNA) +contributors Marina Sandonís Fernández (UPNA), Fernando Idoate Saralegui (Mutua Navarra), Rafael Cabeza Laguna (UPNA) # Match category in the xml description of the module (where it shows up in Modules menu) category Segmentation # url to icon (png, size 128x128 pixels) -iconurl https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/TissueSegmentation.jpg +iconurl https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/TissueSegmentation.jpg # Give people an idea what to expect from this code # - Is it just a test or something you stand behind? -status +status # One line stating what the module does description It gets the 2D/3D segmentation of the abdomen and the thigh from MR images -screenshoturls https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/images/Outputs.png https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/images/SegmentEditor.png https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/images/SlicerCapture.gif https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/images/inputs.png https://github.com/MarinaSandonis/SlicerTissueSegmentation/blob/main/images/module.png +screenshoturls https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/images/module.png https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/images/inputs.png https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/images/Outputs.png https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/images/abdomen_segmenattion.png https://raw.githubusercontent.com/MarinaSandonis/SlicerTissueSegmentation/main/images/thigh_segmenattion.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 - From fea13cd25e187e4c2544dfdf03bffc00e0eb130b Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Fri, 18 Nov 2022 22:02:45 +0100 Subject: [PATCH 06/33] Propose ExtraMarkups extension. --- ExtraMarkups.s4ext | 44 ++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 ExtraMarkups.s4ext diff --git a/ExtraMarkups.s4ext b/ExtraMarkups.s4ext new file mode 100644 index 000000000..a884eda65 --- /dev/null +++ b/ExtraMarkups.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager +scm git +scmurl https://github.com/chir-set/ExtraMarkups.git +scmrevision main + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends NA + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/chir-set/ExtraMarkups/ + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Saleem Edah-Tally ([Surgeon] [Hobbyist developer]) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Utilities + +# url to icon (png, size 128x128 pixels) +iconurl https://github.com/chir-set/ExtraMarkups/raw/main/ExtraMarkups.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description Set of custom markups. + +# Space separated list of urls +screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/ExtraMarkups/raw/main/Shape/Cone_0.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From 99058b5f37dac65d525fd3a85bce74f6f4e96e55 Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Fri, 18 Nov 2022 22:10:23 +0100 Subject: [PATCH 07/33] Update repository name. ExtraMarkups -> SlicerExtraMarkups. --- ExtraMarkups.s4ext | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/ExtraMarkups.s4ext b/ExtraMarkups.s4ext index a884eda65..4392ddcd6 100644 --- a/ExtraMarkups.s4ext +++ b/ExtraMarkups.s4ext @@ -6,7 +6,7 @@ # This is source code manager scm git -scmurl https://github.com/chir-set/ExtraMarkups.git +scmurl https://github.com/chir-set/SlicerExtraMarkups.git scmrevision main # list dependencies @@ -18,7 +18,7 @@ depends NA build_subdirectory . # homepage -homepage https://github.com/chir-set/ExtraMarkups/ +homepage https://github.com/chir-set/SlicerExtraMarkups/ # Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) # For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) @@ -28,7 +28,7 @@ contributors Saleem Edah-Tally ([Surgeon] [Hobbyist developer]) category Utilities # url to icon (png, size 128x128 pixels) -iconurl https://github.com/chir-set/ExtraMarkups/raw/main/ExtraMarkups.png +iconurl https://github.com/chir-set/SlicerExtraMarkups/raw/main/ExtraMarkups.png # Give people an idea what to expect from this code # - Is it just a test or something you stand behind? @@ -38,7 +38,7 @@ status description Set of custom markups. # Space separated list of urls -screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/ExtraMarkups/raw/main/Shape/Cone_0.png +screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cone_0.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From c7810c1262790d85277559e48e8e7dbf6a381d0c Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Fri, 18 Nov 2022 22:28:10 +0100 Subject: [PATCH 08/33] Propose ExtraMarkups extension as SlicerExtraMarkups. --- ExtraMarkups.s4ext => SlicerExtraMarkups.s4ext | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename ExtraMarkups.s4ext => SlicerExtraMarkups.s4ext (100%) diff --git a/ExtraMarkups.s4ext b/SlicerExtraMarkups.s4ext similarity index 100% rename from ExtraMarkups.s4ext rename to SlicerExtraMarkups.s4ext From 267c99737a5b3c2824e7c7058d1453618a4b3f0e Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Fri, 25 Nov 2022 22:01:39 +0100 Subject: [PATCH 09/33] Update screenshoturls and description fields. --- SlicerExtraMarkups.s4ext | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/SlicerExtraMarkups.s4ext b/SlicerExtraMarkups.s4ext index 4392ddcd6..a1e2404cf 100644 --- a/SlicerExtraMarkups.s4ext +++ b/SlicerExtraMarkups.s4ext @@ -35,10 +35,10 @@ iconurl https://github.com/chir-set/SlicerExtraMarkups/raw/main/ExtraMarkups.png status # One line stating what the module does -description Set of custom markups. +description This extension adds a Label markups node that draws an arrow with a text label, and a Shape markups node that can draw defined primitive shapes (circle, cone...). The result is controlled by placing usual control points in slice views and 3D views. Each object can be saved in scene and reloaded.

As a markups application, this extension also includes Stenosis measurement : 3D module. It expects a Tube drawn with the Shape markups that represents an observer dependent arterial wall, and a Segment which is the result of segmenting a contrasted arterial lumen. This module can then calculate the lesion volume by subtracting the lumen volume from the wall volume, and hence, determine a volumetric stenosis degree. # Space separated list of urls -screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cone_0.png +screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cone_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cylinder_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Disk_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Ring_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Sphere_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Tube_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/StenosisMeasurement3D/StenosisMeasurement3D_0.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From a71a9cd18ad99282d4f33a28cef04010818b682f Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Sat, 26 Nov 2022 16:28:40 +0100 Subject: [PATCH 10/33] Remove StenosisMeasurement3D module. It will be proposed in SlicerVMTK with a soft dependency on SlicerExtraMarkups. --- SlicerExtraMarkups.s4ext | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/SlicerExtraMarkups.s4ext b/SlicerExtraMarkups.s4ext index a1e2404cf..fed6dcfb8 100644 --- a/SlicerExtraMarkups.s4ext +++ b/SlicerExtraMarkups.s4ext @@ -35,10 +35,10 @@ iconurl https://github.com/chir-set/SlicerExtraMarkups/raw/main/ExtraMarkups.png status # One line stating what the module does -description This extension adds a Label markups node that draws an arrow with a text label, and a Shape markups node that can draw defined primitive shapes (circle, cone...). The result is controlled by placing usual control points in slice views and 3D views. Each object can be saved in scene and reloaded.

As a markups application, this extension also includes Stenosis measurement : 3D module. It expects a Tube drawn with the Shape markups that represents an observer dependent arterial wall, and a Segment which is the result of segmenting a contrasted arterial lumen. This module can then calculate the lesion volume by subtracting the lumen volume from the wall volume, and hence, determine a volumetric stenosis degree. +description This extension adds a Label markups node that draws an arrow with a text label, and a Shape markups node that can draw defined primitive shapes (circle, cone...). The result is controlled by placing usual control points in slice views and 3D views. Each object can be saved in scene and reloaded. # Space separated list of urls -screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cone_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cylinder_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Disk_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Ring_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Sphere_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Tube_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/StenosisMeasurement3D/StenosisMeasurement3D_0.png +screenshoturls https://github.com/chir-set/SlicerExtraMarkups/raw/main/Label/Label_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cone_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Cylinder_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Disk_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Ring_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Sphere_0.png https://github.com/chir-set/SlicerExtraMarkups/raw/main/Shape/Tube_0.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From ac6c461941e6d081ba4074e7c7eb6291b3e1ad9e Mon Sep 17 00:00:00 2001 From: Rafael Palomar Date: Sat, 14 Jan 2023 20:52:40 +0100 Subject: [PATCH 11/33] BUG: Fix double space between urls in SlicerLiver This commit replaces the double space between screenshot urls for the SlicerLiver extension by single space. This was causing issues with the extension slideshow. Co-authored-by: James Butler --- SlicerLiver.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/SlicerLiver.s4ext b/SlicerLiver.s4ext index 57e70381b..a062295b7 100644 --- a/SlicerLiver.s4ext +++ b/SlicerLiver.s4ext @@ -38,7 +38,7 @@ status beta description Liver vascular analysis and resection planning # Space separated list of urls -screenshoturls https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_01.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_02.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_03.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_04.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_05.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_06.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_07.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_08.png +screenshoturls https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_01.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_02.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_03.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_04.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_05.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_06.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_07.png https://raw.githubusercontent.com/ALive-research/Slicer-Liver/master/Screenshots/Slicer-Liver_screenshot_08.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From 8432c81b4d8836343124f81c3500b6ca02155d58 Mon Sep 17 00:00:00 2001 From: Sara Rolfe <43060230+smrolfe@users.noreply.github.com> Date: Wed, 8 Feb 2023 18:58:05 +0000 Subject: [PATCH 12/33] Add MEMOS extension (#1908) --- MEMOS.s4ext | 43 +++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 43 insertions(+) create mode 100644 MEMOS.s4ext diff --git a/MEMOS.s4ext b/MEMOS.s4ext new file mode 100644 index 000000000..06c194b92 --- /dev/null +++ b/MEMOS.s4ext @@ -0,0 +1,43 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager (i.e. svn) +scm git +scmurl https://github.com/SlicerMorph/SlicerMEMOS +scmrevision master + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first + +# Inner build directory (default is .) +build_subdirectory . + +# homepage +homepage https://github.com/SlicerMorph/SlicerMEMOS + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Sara Rolfe (SCRI), Murat Maga (SCRI, UW) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Segmentation + +# url to icon (png, size 128x128 pixels) +iconurl https://github.com/SlicerMorph/SlicerMEMOS/raw/main/MEMOS/Resources/Icons/MEMOS.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status Beta + +# One line stating what the module does +description This extension enables deep learning-powered segmentation of 50 anatomical structures from microCT scans of embryonic mice. + +# Space separated list of urls +screenshoturls https://github.com/SlicerMorph/SlicerMEMOS/raw/main/memos.jpg + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 \ No newline at end of file From 02dededf089a3bcb657248969e4cce98ddf02b15 Mon Sep 17 00:00:00 2001 From: Sara Rolfe <43060230+smrolfe@users.noreply.github.com> Date: Thu, 9 Feb 2023 18:00:15 +0000 Subject: [PATCH 13/33] Fix SlicerMEMOS repo branch name (#1909) --- MEMOS.s4ext | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/MEMOS.s4ext b/MEMOS.s4ext index 06c194b92..652466406 100644 --- a/MEMOS.s4ext +++ b/MEMOS.s4ext @@ -7,7 +7,7 @@ # This is source code manager (i.e. svn) scm git scmurl https://github.com/SlicerMorph/SlicerMEMOS -scmrevision master +scmrevision main # list dependencies # - These should be names of other modules that have .s4ext files @@ -40,4 +40,4 @@ description This extension enables deep learning-powered segmentation of 50 anat screenshoturls https://github.com/SlicerMorph/SlicerMEMOS/raw/main/memos.jpg # 0 or 1: Define if the extension should be enabled after its installation. -enabled 1 \ No newline at end of file +enabled 1 From abab8ff420969d5d65b6d911276f8bb359233523 Mon Sep 17 00:00:00 2001 From: Sara Rolfe <43060230+smrolfe@users.noreply.github.com> Date: Wed, 22 Feb 2023 12:55:29 -0800 Subject: [PATCH 14/33] Add PyTorch extension as a dependency --- MEMOS.s4ext | 1 + 1 file changed, 1 insertion(+) diff --git a/MEMOS.s4ext b/MEMOS.s4ext index 652466406..e4659d92d 100644 --- a/MEMOS.s4ext +++ b/MEMOS.s4ext @@ -12,6 +12,7 @@ scmrevision main # list dependencies # - These should be names of other modules that have .s4ext files # - The dependencies will be built first +depends PyTorch # Inner build directory (default is .) build_subdirectory . From c79027b3a6f6d26fff2a5532529276465c50e2fe Mon Sep 17 00:00:00 2001 From: Andras Lasso Date: Sat, 25 Feb 2023 01:40:34 -0500 Subject: [PATCH 15/33] Rename SlicerExtraMarkups to ExtraMarkups to match the extension name Repository name is SlicerExtraMarkups, extension name is ExtraMarkups. --- SlicerExtraMarkups.s4ext => ExtraMarkups.s4ext | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename SlicerExtraMarkups.s4ext => ExtraMarkups.s4ext (100%) diff --git a/SlicerExtraMarkups.s4ext b/ExtraMarkups.s4ext similarity index 100% rename from SlicerExtraMarkups.s4ext rename to ExtraMarkups.s4ext From 6ea8e46c6a54984ce743afc9da1d613073911acd Mon Sep 17 00:00:00 2001 From: Andras Lasso Date: Wed, 8 Mar 2023 13:32:54 -0500 Subject: [PATCH 16/33] Add SlicerNeuro extension While translating Slicer to different languagues we noticed that a very specialized brain coordinate system transformation module (ACPCTransform) is still in Slicer core. This is an outlier, because all other domain-specific modules are now in extensions. To make translation and maintenance of Slicer core easier it makes sense to move ACPCTransform to an extension. Since there was no existing extension for generic neuroimaging modules, a new SlicerNeuro extension has been added. Since the extension only contains one module, it would not be that useful, so some other neuroimaging related extensions are added as dependencies, so the extension can serve as a starting point for users in this field (they need to install only one extension to get all). If more modules will be added to the extension then this may be revisited (extensions that are not actually required can be removed from the extension dependency list). Co-authored-by: Steve Pieper --- SlicerNeuro.s4ext | 44 ++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 SlicerNeuro.s4ext diff --git a/SlicerNeuro.s4ext b/SlicerNeuro.s4ext new file mode 100644 index 000000000..f19b13f1b --- /dev/null +++ b/SlicerNeuro.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager +scm git +scmurl https://github.com/Slicer/SlicerNeuro +scmrevision main + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends UKFTractography SwissSkullStripper SlicerFreeSurfer SlicerDcm2nii SlicerDMRI HDBrainExtraction SlicerWMA + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/Slicer/SlicerNeuro + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Andras Lasso (PerkLab (Queen's University)) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Neuroimaging + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/Slicer/SlicerNeuro/main/SlicerNeuro.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description This extension provides ACPC coordinate transformation tool and installs extensions commonly needed for neuroimaging. + +# Space separated list of urls +screenshoturls https://raw.githubusercontent.com/Slicer/SlicerNeuro/main/Docs/module_acpctransform_1.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From a851a82bf1be4c63858146a9126133264548adc3 Mon Sep 17 00:00:00 2001 From: Andras Lasso Date: Tue, 14 Mar 2023 08:48:42 -0400 Subject: [PATCH 17/33] Added disabling unused github features to pull request checklist --- .github/PULL_REQUEST_TEMPLATE.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/.github/PULL_REQUEST_TEMPLATE.md b/.github/PULL_REQUEST_TEMPLATE.md index ed8c5b8a2..9ffdc32ed 100644 --- a/.github/PULL_REQUEST_TEMPLATE.md +++ b/.github/PULL_REQUEST_TEMPLATE.md @@ -26,5 +26,7 @@ Thank you for contributing to 3D Slicer! - [ ] Publication: link to publication and/or to PubMed reference (if available) - [ ] License: We suggest you use a permissive license that includes patent and contribution clauses. This will help protect developers and ensure the code remains freely available. We suggest you use the [Slicer License](https://github.com/Slicer/Slicer/blob/main/License.txt) or the [Apache 2.0](https://www.apache.org/licenses/LICENSE-2.0). Always mention in your README file the license you have chosen. If you choose a different license, explain why to the extension maintainers. Depending on the license we may not be able to host your work. Read [here](https://opensource.guide/legal/#which-open-source-license-is-appropriate-for-my-project) to learn more about licenses. - [ ] Content of submitted s4ext file is consistent with the top-level CMakeLists.txt file in the repository (description, URLs, dependencies, etc. are the same) - +- Hide unused features in the repository to reduce noise/irrelevant information: + - [ ] Click `Settings` and in repository settings uncheck `Wiki`, `Projects`, and `Discussions` (if they are currently not used) + - [ ] Click the settings icon next to `About` in the top-right corner of the repository main page and uncheck `Releases` and `Packages` (if they are currently not used) From 37cf5972782050e1e2c66b5b12a9d568f9b8fb9f Mon Sep 17 00:00:00 2001 From: Saleem Edah-Tally Date: Wed, 22 Mar 2023 17:58:04 +0100 Subject: [PATCH 18/33] Update SlicerVMTK. In the process of adding 'StenosisMeasurement3D' module to SlicerVMTK, a dependency on 'ExtraMarkups' extension is introduced. The s4ext file is hereby updated. --- SlicerVMTK.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/SlicerVMTK.s4ext b/SlicerVMTK.s4ext index de22577a4..1f73b30f4 100644 --- a/SlicerVMTK.s4ext +++ b/SlicerVMTK.s4ext @@ -12,7 +12,7 @@ scmrevision master # list dependencies # - These should be names of other modules that have .s4ext files # - The dependencies will be built first -depends NA +depends ExtraMarkups # Inner build directory (default is ".") build_subdirectory inner-build From 367cc3cfef7f651e7f5ec0bee1cefee6fd661065 Mon Sep 17 00:00:00 2001 From: Anthony Lombardi Date: Tue, 3 Jan 2023 12:29:47 -0500 Subject: [PATCH 19/33] Add SlicerAutoscoperM extension See https://autoscoperm.slicer.org/ Co-authored-by: Jean-Christophe Fillion-Robin --- SlicerAutoscoperM.s4ext | 44 +++++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 SlicerAutoscoperM.s4ext diff --git a/SlicerAutoscoperM.s4ext b/SlicerAutoscoperM.s4ext new file mode 100644 index 000000000..85927d53b --- /dev/null +++ b/SlicerAutoscoperM.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager +scm git +scmurl https://github.com/BrownBiomechanics/SlicerAutoscoperM.git +scmrevision main + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends NA + +# Inner build directory (default is ".") +build_subdirectory inner-build + +# homepage +homepage https://autoscoperm.slicer.org/ + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Anthony Lombardi (Kitware), Amy Morton (Brown University), Bardiya Akhbari (Brown University), Beatriz Paniagua (Kitware), Jean-Christophe Fillion-Robin (Kitware) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Tracking + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/BrownBiomechanics/SlicerAutoscoperM/main/SlicerAutoscoperM.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description SlicerAutoscoperM is an extension for 3D Slicer for 2D-3D image registration integrating with Autoscoper for image-based 3D motion tracking of skeletal structures. + +# Space separated list of urls +screenshoturls https://github.com/BrownBiomechanics/SlicerAutoscoperM/releases/download/docs-resources/AutoscoperMainWindow.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From 0396cfb3c1221af498fd3841f7dd2f447c680cd8 Mon Sep 17 00:00:00 2001 From: Simon Oxenford <47367230+simonoxen@users.noreply.github.com> Date: Tue, 28 Mar 2023 14:17:25 +0200 Subject: [PATCH 20/33] SlicerNetstim update screenshot path --- SlicerNetstim.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/SlicerNetstim.s4ext b/SlicerNetstim.s4ext index 52af79905..7d1d1ebcf 100644 --- a/SlicerNetstim.s4ext +++ b/SlicerNetstim.s4ext @@ -38,7 +38,7 @@ status beta description Netstim modules collection for deep brain stimulation applications # Space separated list of urls -screenshoturls https://raw.githubusercontent.com/netstim/SlicerNetstim/master/Documentation/Screenshot.png +screenshoturls https://raw.githubusercontent.com/netstim/SlicerNetstim/master/LeadOR/Screenshots/Lead-OR_Scene.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From c80243d5951e4de454010238db0ecf835e678ad1 Mon Sep 17 00:00:00 2001 From: Jean-Christophe Fillion-Robin Date: Tue, 28 Mar 2023 12:14:46 -0400 Subject: [PATCH 21/33] DOC: Update obsolete comments describing the source code manager This is a follow-up of Slicer/Slicer@7f533d3d0 --- ABLTemporalBoneSegmentation.s4ext | 2 +- ARCHIVE/ABC.s4ext | 2 +- ARCHIVE/AutoTract.s4ext | 2 +- ARCHIVE/CBC_3D_I2MConversion.s4ext | 2 +- ARCHIVE/Cardiac_MRI_Toolkit.s4ext | 2 +- ARCHIVE/DTI-Reg.s4ext | 2 +- ARCHIVE/DTIAtlasBuilder.s4ext | 2 +- ARCHIVE/DTIAtlasFiberAnalyzer.s4ext | 2 +- ARCHIVE/DTIPrep.s4ext | 2 +- ARCHIVE/DTIProcess.s4ext | 2 +- ARCHIVE/DeepInfer.s4ext | 2 +- ARCHIVE/DiceComputation.s4ext | 2 +- ARCHIVE/Eigen3.s4ext | 2 +- ARCHIVE/FacetedVisualizer.s4ext | 2 +- ARCHIVE/FiberViewerLight.s4ext | 2 +- ARCHIVE/GraphCutSegment.s4ext | 2 +- ARCHIVE/IASEM.s4ext | 2 +- ARCHIVE/LAScarSegmenter.s4ext | 2 +- ARCHIVE/LASegmenter.s4ext | 2 +- ARCHIVE/LesionSimulator.s4ext | 2 +- ARCHIVE/LesionSpotlight.s4ext | 2 +- ARCHIVE/LightWeightRobotIGT.s4ext | 2 +- ARCHIVE/LongitudinalPETCT.s4ext | 2 +- ARCHIVE/MABMIS.s4ext | 2 +- ARCHIVE/MFSDA.s4ext | 2 +- ARCHIVE/MarginCalculator.s4ext | 2 +- ARCHIVE/MultiLevelRegistration.s4ext | 2 +- ARCHIVE/OpenCAD.s4ext | 2 +- ARCHIVE/OpenCVExample.s4ext | 2 +- ARCHIVE/ROBEXBrainExtraction.s4ext | 2 +- ARCHIVE/RSSExtension.s4ext | 2 +- ARCHIVE/ResampleDTIlogEuclidean.s4ext | 2 +- ARCHIVE/SegmentationWizard.s4ext | 2 +- ARCHIVE/ShapeQuantifier.s4ext | 2 +- ARCHIVE/SlicerAstro.s4ext | 2 +- ARCHIVE/SlicerIMSTK.s4ext | 2 +- ARCHIVE/SlicerPathology.s4ext | 2 +- ARCHIVE/SlicerPinholeCameras.s4ext | 2 +- ARCHIVE/SlicerVASST.s4ext | 2 +- ARCHIVE/SupervisedSegmentationToolbox.s4ext | 2 +- ARCHIVE/VirtualFractureReconstruction.s4ext | 2 +- ARCHIVE/WindowLevelEffect.s4ext | 2 +- ARCHIVE/exStone.s4ext | 2 +- ARCHIVE/lapdMouseBrowser.s4ext | 2 +- AblationPlanner.s4ext | 2 +- AirwaySegmentation.s4ext | 2 +- AnglePlanesExtension.s4ext | 2 +- AnomalousFiltersExtension.s4ext | 2 +- ArduinoController.s4ext | 2 +- AstmPhantomTest.s4ext | 2 +- Auto3dgm.s4ext | 2 +- AutomatedDentalTools.s4ext | 2 +- BoneReconstructionPlanner.s4ext | 2 +- BoneTextureExtension.s4ext | 2 +- BoneThicknessMapping.s4ext | 2 +- BrainVolumeRefinement.s4ext | 2 +- BreastImplantAnalyzer.s4ext | 2 +- Breast_DCEMRI_FTV.s4ext | 2 +- CMFreg.s4ext | 2 +- CarreraSlice.s4ext | 2 +- ChangeTracker.s4ext | 2 +- CleverSeg.s4ext | 2 +- ColocZStats.s4ext | 2 +- CurveMaker.s4ext | 2 +- DCMQI.s4ext | 2 +- DICOMwebBrowser.s4ext | 2 +- DRRGenerator.s4ext | 2 +- DSCMRIAnalysis.s4ext | 2 +- DatabaseInteractor.s4ext | 2 +- DebuggingTools.s4ext | 2 +- DeveloperToolsForExtensions.s4ext | 2 +- EasyClip.s4ext | 2 +- ErodeDilateLabel.s4ext | 2 +- FiducialsToModelDistance.s4ext | 2 +- FilmDosimetryAnalysis.s4ext | 2 +- GelDosimetryAnalysis.s4ext | 2 +- GeodesicSlicer.s4ext | 2 +- GyroGuide.s4ext | 2 +- ImageCompare.s4ext | 2 +- ImageMaker.s4ext | 2 +- IntensitySegmenter.s4ext | 2 +- KidneyStoneCalculator.s4ext | 2 +- LungCTAnalyzer.s4ext | 2 +- MEMOS.s4ext | 2 +- MONAILabel.s4ext | 2 +- MRUSLandmarking.s4ext | 2 +- MarkupsToModel.s4ext | 2 +- MatlabBridge.s4ext | 2 +- MeshStatisticsExtension.s4ext | 2 +- MeshToLabelMap.s4ext | 2 +- ModelClip.s4ext | 2 +- ModelCropper.s4ext | 2 +- ModelToModelDistance.s4ext | 2 +- NvidiaAIAssistedAnnotation.s4ext | 2 +- OpenDose3D.s4ext | 2 +- OrthodonticAnalysis.s4ext | 2 +- OsteotomyPlanner.s4ext | 2 +- PBNRR.s4ext | 2 +- PET-IndiC.s4ext | 2 +- PETCPhantom.s4ext | 2 +- PETDICOMExtension.s4ext | 2 +- PETLiverUptakeMeasurement.s4ext | 2 +- PETTumorSegmentation.s4ext | 2 +- ParallelProcessing.s4ext | 2 +- PathReconstruction.s4ext | 2 +- PedicleScrewSimulator.s4ext | 2 +- PerkTutor.s4ext | 2 +- PetSpectAnalysis.s4ext | 2 +- PickAndPaintExtension.s4ext | 2 +- PkModeling.s4ext | 2 +- PortPlacement.s4ext | 2 +- PyTorch.s4ext | 2 +- QuantitativeReporting.s4ext | 2 +- RVXLiverSegmentation.s4ext | 2 +- RawImageGuess.s4ext | 2 +- RegistrationQA.s4ext | 2 +- SNRMeasurement.s4ext | 2 +- SPHARM-PDM.s4ext | 2 +- Sandbox.s4ext | 2 +- ScatteredTransform.s4ext | 2 +- Scoliosis.s4ext | 2 +- SegmentEditorExtraEffects.s4ext | 2 +- SegmentGeometry.s4ext | 2 +- SegmentMesher.s4ext | 2 +- SegmentRegistration.s4ext | 2 +- SegmentationAidedRegistration.s4ext | 2 +- SequenceRegistration.s4ext | 2 +- ShapePopulationViewer.s4ext | 2 +- ShapeRegressionExtension.s4ext | 2 +- ShapeVariationAnalyzer.s4ext | 2 +- SkeletalRepresentation.s4ext | 2 +- SkullStripper.s4ext | 2 +- SlicerAIGT.s4ext | 2 +- SlicerANTs.s4ext | 2 +- SlicerAutoscroll.s4ext | 2 +- SlicerBatchAnonymize.s4ext | 2 +- SlicerCMF.s4ext | 2 +- SlicerCaseIterator.s4ext | 2 +- SlicerCervicalSpine.s4ext | 2 +- SlicerCochlea.s4ext | 2 +- SlicerDcm2nii.s4ext | 2 +- SlicerDensityLungSegmentation.s4ext | 2 +- SlicerDentalModelSeg.s4ext | 2 +- SlicerDevelopmentToolbox.s4ext | 2 +- SlicerElastix.s4ext | 2 +- SlicerFab.s4ext | 2 +- SlicerFreeSurfer.s4ext | 2 +- SlicerHeart.s4ext | 2 +- SlicerIGSIO.s4ext | 2 +- SlicerIGT.s4ext | 2 +- SlicerITKUltrasound.s4ext | 2 +- SlicerJupyter.s4ext | 2 +- SlicerLayoutButtons.s4ext | 2 +- SlicerLiver.s4ext | 2 +- SlicerLookingGlass.s4ext | 2 +- SlicerMorph.s4ext | 2 +- SlicerNetstim.s4ext | 2 +- SlicerOpenAnatomy.s4ext | 2 +- SlicerOpenCV.s4ext | 2 +- SlicerOpenIGTLink.s4ext | 2 +- SlicerProstate.s4ext | 2 +- SlicerProstateAblation.s4ext | 2 +- SlicerRT.s4ext | 2 +- SlicerRadiomics.s4ext | 2 +- SlicerRegularizedFastMarching.s4ext | 2 +- SlicerTissueSegmentation.s4ext | 2 +- SlicerToKiwiExporter.s4ext | 2 +- SlicerVMTK.s4ext | 2 +- SlicerVirtualReality.s4ext | 2 +- SoundControl.s4ext | 2 +- SurfaceFragmentsRegistration.s4ext | 2 +- SurfaceMarkup.s4ext | 2 +- SurfaceWrapSolidify.s4ext | 2 +- T1Mapping.s4ext | 2 +- T1_ECVMapping.s4ext | 2 +- T2mapping.s4ext | 2 +- TCIABrowser.s4ext | 2 +- TITAN.s4ext | 2 +- TOMAAT.s4ext | 2 +- TorchIO.s4ext | 2 +- UKFTractography.s4ext | 2 +- VASSTAlgorithms.s4ext | 2 +- VolumeClip.s4ext | 2 +- XNATSlicer.s4ext | 2 +- ZFrameRegistration.s4ext | 2 +- flywheel_connect.s4ext | 2 +- slicerPRISMRendering.s4ext | 2 +- 187 files changed, 187 insertions(+), 187 deletions(-) diff --git a/ABLTemporalBoneSegmentation.s4ext b/ABLTemporalBoneSegmentation.s4ext index f99f5ebe0..fd9ca13a5 100644 --- a/ABLTemporalBoneSegmentation.s4ext +++ b/ABLTemporalBoneSegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Auditory-Biophysics-Lab/Slicer-ABLTemporalBoneSegmentation scmrevision master diff --git a/ARCHIVE/ABC.s4ext b/ARCHIVE/ABC.s4ext index 6b9d53c3a..f8a5430b7 100644 --- a/ARCHIVE/ABC.s4ext +++ b/ARCHIVE/ABC.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/ABC scmrevision dcd757f4d6723c5658dd3197a20f7984fb1cf8ea diff --git a/ARCHIVE/AutoTract.s4ext b/ARCHIVE/AutoTract.s4ext index 27669c6bf..a1c42c40d 100644 --- a/ARCHIVE/AutoTract.s4ext +++ b/ARCHIVE/AutoTract.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/AutoTract.git scmrevision release diff --git a/ARCHIVE/CBC_3D_I2MConversion.s4ext b/ARCHIVE/CBC_3D_I2MConversion.s4ext index 489c70e55..e6792b092 100644 --- a/ARCHIVE/CBC_3D_I2MConversion.s4ext +++ b/ARCHIVE/CBC_3D_I2MConversion.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jbest002/CBC3D_I2M_Conversion_SlicerExtension.git scmrevision 1f490c6 diff --git a/ARCHIVE/Cardiac_MRI_Toolkit.s4ext b/ARCHIVE/Cardiac_MRI_Toolkit.s4ext index 4688218ba..d913dbb42 100644 --- a/ARCHIVE/Cardiac_MRI_Toolkit.s4ext +++ b/ARCHIVE/Cardiac_MRI_Toolkit.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/carma-center/carma_slicer_extension.git scmrevision 4e01680 diff --git a/ARCHIVE/DTI-Reg.s4ext b/ARCHIVE/DTI-Reg.s4ext index 7a135e438..1aebd4f35 100644 --- a/ARCHIVE/DTI-Reg.s4ext +++ b/ARCHIVE/DTI-Reg.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/DTI-Reg.git scmrevision release diff --git a/ARCHIVE/DTIAtlasBuilder.s4ext b/ARCHIVE/DTIAtlasBuilder.s4ext index 3b2f57f50..1a6e26c4d 100644 --- a/ARCHIVE/DTIAtlasBuilder.s4ext +++ b/ARCHIVE/DTIAtlasBuilder.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/DTIAtlasBuilder.git scmrevision release diff --git a/ARCHIVE/DTIAtlasFiberAnalyzer.s4ext b/ARCHIVE/DTIAtlasFiberAnalyzer.s4ext index ae21a040d..4bc18298b 100644 --- a/ARCHIVE/DTIAtlasFiberAnalyzer.s4ext +++ b/ARCHIVE/DTIAtlasFiberAnalyzer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/DTIFiberTractStatistics.git scmrevision release diff --git a/ARCHIVE/DTIPrep.s4ext b/ARCHIVE/DTIPrep.s4ext index edec2a4bb..a903bb109 100644 --- a/ARCHIVE/DTIPrep.s4ext +++ b/ARCHIVE/DTIPrep.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/DTIPrep.git scmrevision release diff --git a/ARCHIVE/DTIProcess.s4ext b/ARCHIVE/DTIProcess.s4ext index 05eea3e97..04446d6c2 100644 --- a/ARCHIVE/DTIProcess.s4ext +++ b/ARCHIVE/DTIProcess.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/DTIProcessToolkit.git scmrevision release diff --git a/ARCHIVE/DeepInfer.s4ext b/ARCHIVE/DeepInfer.s4ext index 7f3850f71..253ba1291 100644 --- a/ARCHIVE/DeepInfer.s4ext +++ b/ARCHIVE/DeepInfer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DeepInfer/Slicer-DeepInfer.git scmrevision master diff --git a/ARCHIVE/DiceComputation.s4ext b/ARCHIVE/DiceComputation.s4ext index 8fed702f0..e9ef63ecd 100644 --- a/ARCHIVE/DiceComputation.s4ext +++ b/ARCHIVE/DiceComputation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lchauvin/DiceComputation.git scmrevision 11e62e2337252aa0214189c17489a89d5ad4d9ef diff --git a/ARCHIVE/Eigen3.s4ext b/ARCHIVE/Eigen3.s4ext index dc4ef104d..edb7ab378 100644 --- a/ARCHIVE/Eigen3.s4ext +++ b/ARCHIVE/Eigen3.s4ext @@ -1,4 +1,4 @@ -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/eigenteam/eigen-git-mirror scmrevision branches/3.3 diff --git a/ARCHIVE/FacetedVisualizer.s4ext b/ARCHIVE/FacetedVisualizer.s4ext index c5fec32e9..729eb7a59 100644 --- a/ARCHIVE/FacetedVisualizer.s4ext +++ b/ARCHIVE/FacetedVisualizer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/millerjv/FacetedVisualizer.git scmrevision 7beba23 diff --git a/ARCHIVE/FiberViewerLight.s4ext b/ARCHIVE/FiberViewerLight.s4ext index d8f0f9fae..feabf4cee 100644 --- a/ARCHIVE/FiberViewerLight.s4ext +++ b/ARCHIVE/FiberViewerLight.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/FiberViewerLight.git scmrevision release diff --git a/ARCHIVE/GraphCutSegment.s4ext b/ARCHIVE/GraphCutSegment.s4ext index 0c023e56a..5a9e13aaf 100644 --- a/ARCHIVE/GraphCutSegment.s4ext +++ b/ARCHIVE/GraphCutSegment.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SlicerGraphCutSegment scmrevision master diff --git a/ARCHIVE/IASEM.s4ext b/ARCHIVE/IASEM.s4ext index 785f6d57a..8122ee3fd 100644 --- a/ARCHIVE/IASEM.s4ext +++ b/ARCHIVE/IASEM.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/blowekamp/Slicer-IASEM.git scmrevision 5696e8259d80a85ef823439dbefde33bdcf17298 diff --git a/ARCHIVE/LAScarSegmenter.s4ext b/ARCHIVE/LAScarSegmenter.s4ext index 43307186b..89f6353a8 100644 --- a/ARCHIVE/LAScarSegmenter.s4ext +++ b/ARCHIVE/LAScarSegmenter.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ljzhu/LAScarSegmenter.git scmrevision 869f22f diff --git a/ARCHIVE/LASegmenter.s4ext b/ARCHIVE/LASegmenter.s4ext index 42d31401b..2dec0202c 100644 --- a/ARCHIVE/LASegmenter.s4ext +++ b/ARCHIVE/LASegmenter.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ljzhu/LASegmenter.git scmrevision 1a0a53f29beefaf5c90384de2f66feaadc588b6c diff --git a/ARCHIVE/LesionSimulator.s4ext b/ARCHIVE/LesionSimulator.s4ext index 6cba17369..05822cae5 100644 --- a/ARCHIVE/LesionSimulator.s4ext +++ b/ARCHIVE/LesionSimulator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/CSIM-Toolkits/Slicer-LesionSimulatorExtension.git scmrevision master diff --git a/ARCHIVE/LesionSpotlight.s4ext b/ARCHIVE/LesionSpotlight.s4ext index e7d61dbdf..a32f87a47 100644 --- a/ARCHIVE/LesionSpotlight.s4ext +++ b/ARCHIVE/LesionSpotlight.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/CSIM-Toolkits/LesionSpotlightExtension.git scmrevision master diff --git a/ARCHIVE/LightWeightRobotIGT.s4ext b/ARCHIVE/LightWeightRobotIGT.s4ext index 04f807226..6d55973bc 100644 --- a/ARCHIVE/LightWeightRobotIGT.s4ext +++ b/ARCHIVE/LightWeightRobotIGT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SNRLab/LightWeightRobotIGT.git scmrevision e639890 diff --git a/ARCHIVE/LongitudinalPETCT.s4ext b/ARCHIVE/LongitudinalPETCT.s4ext index 9ff177128..7af3423b1 100644 --- a/ARCHIVE/LongitudinalPETCT.s4ext +++ b/ARCHIVE/LongitudinalPETCT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/LongitudinalPETCT scmrevision master diff --git a/ARCHIVE/MABMIS.s4ext b/ARCHIVE/MABMIS.s4ext index 16b2c731e..9d5281851 100644 --- a/ARCHIVE/MABMIS.s4ext +++ b/ARCHIVE/MABMIS.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/BrainMeasurement/MultiAtlas scmrevision 1f54e8d diff --git a/ARCHIVE/MFSDA.s4ext b/ARCHIVE/MFSDA.s4ext index adde58831..cd6a95d04 100644 --- a/ARCHIVE/MFSDA.s4ext +++ b/ARCHIVE/MFSDA.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/MFSDA_Python.git scmrevision master diff --git a/ARCHIVE/MarginCalculator.s4ext b/ARCHIVE/MarginCalculator.s4ext index 33cec1fe0..6550cb7cf 100644 --- a/ARCHIVE/MarginCalculator.s4ext +++ b/ARCHIVE/MarginCalculator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jcfr/MarginCalculator.git scmrevision master diff --git a/ARCHIVE/MultiLevelRegistration.s4ext b/ARCHIVE/MultiLevelRegistration.s4ext index 6b7d506d7..020eb99fb 100644 --- a/ARCHIVE/MultiLevelRegistration.s4ext +++ b/ARCHIVE/MultiLevelRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/emily-hammond/SlicerMultiLevelRegistration.git scmrevision 1a7d022 diff --git a/ARCHIVE/OpenCAD.s4ext b/ARCHIVE/OpenCAD.s4ext index 5684c1241..2082dbd75 100644 --- a/ARCHIVE/OpenCAD.s4ext +++ b/ARCHIVE/OpenCAD.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/vnarayan13/Slicer-OpenCAD.git scmrevision 27ade9ac3715131ea41d8f877f8ab07680fb0fc0 diff --git a/ARCHIVE/OpenCVExample.s4ext b/ARCHIVE/OpenCVExample.s4ext index 2ff79a153..a75d005b6 100644 --- a/ARCHIVE/OpenCVExample.s4ext +++ b/ARCHIVE/OpenCVExample.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/OpenCVExample.git scmrevision master diff --git a/ARCHIVE/ROBEXBrainExtraction.s4ext b/ARCHIVE/ROBEXBrainExtraction.s4ext index 79764ef36..2a28357de 100644 --- a/ARCHIVE/ROBEXBrainExtraction.s4ext +++ b/ARCHIVE/ROBEXBrainExtraction.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/CSIM-Toolkits/ROBEXBrainExtraction.git scmrevision ac25d08 diff --git a/ARCHIVE/RSSExtension.s4ext b/ARCHIVE/RSSExtension.s4ext index fc4bb72b5..31231c6c3 100644 --- a/ARCHIVE/RSSExtension.s4ext +++ b/ARCHIVE/RSSExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/gaoyi/RSSExtension.git scmrevision 6c9dc8f8519ba93ff9ef7c220366856f7fa66e43 diff --git a/ARCHIVE/ResampleDTIlogEuclidean.s4ext b/ARCHIVE/ResampleDTIlogEuclidean.s4ext index 357c368d0..2ef976c8c 100644 --- a/ARCHIVE/ResampleDTIlogEuclidean.s4ext +++ b/ARCHIVE/ResampleDTIlogEuclidean.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/ResampleDTIlogEuclidean.git scmrevision 1a2208c4db872d23d335e68e3a76364aaceb3417 diff --git a/ARCHIVE/SegmentationWizard.s4ext b/ARCHIVE/SegmentationWizard.s4ext index 1962c1dd5..9dbb9fd83 100644 --- a/ARCHIVE/SegmentationWizard.s4ext +++ b/ARCHIVE/SegmentationWizard.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QTIM-Lab/SlicerSegmentationWizard.git scmrevision master diff --git a/ARCHIVE/ShapeQuantifier.s4ext b/ARCHIVE/ShapeQuantifier.s4ext index 45c5702b8..950961ab0 100644 --- a/ARCHIVE/ShapeQuantifier.s4ext +++ b/ARCHIVE/ShapeQuantifier.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jbvimort/ShapeQuantifierExtension.git scmrevision nightly diff --git a/ARCHIVE/SlicerAstro.s4ext b/ARCHIVE/SlicerAstro.s4ext index 5e6c7d1ef..12a07e798 100644 --- a/ARCHIVE/SlicerAstro.s4ext +++ b/ARCHIVE/SlicerAstro.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Punzo/SlicerAstro.git scmrevision master diff --git a/ARCHIVE/SlicerIMSTK.s4ext b/ARCHIVE/SlicerIMSTK.s4ext index e2690790a..5b262f943 100644 --- a/ARCHIVE/SlicerIMSTK.s4ext +++ b/ARCHIVE/SlicerIMSTK.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://gitlab.kitware.com/iMSTK/slicerimstk.git scmrevision master diff --git a/ARCHIVE/SlicerPathology.s4ext b/ARCHIVE/SlicerPathology.s4ext index 351248f6e..e17605624 100644 --- a/ARCHIVE/SlicerPathology.s4ext +++ b/ARCHIVE/SlicerPathology.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SBU-BMI/SlicerPathology.git scmrevision v1.2.5 diff --git a/ARCHIVE/SlicerPinholeCameras.s4ext b/ARCHIVE/SlicerPinholeCameras.s4ext index c2a0e1704..26197055b 100644 --- a/ARCHIVE/SlicerPinholeCameras.s4ext +++ b/ARCHIVE/SlicerPinholeCameras.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/VASST/SlicerPinholeCameras.git scmrevision master diff --git a/ARCHIVE/SlicerVASST.s4ext b/ARCHIVE/SlicerVASST.s4ext index 78d7f4717..5fdc6a4cc 100644 --- a/ARCHIVE/SlicerVASST.s4ext +++ b/ARCHIVE/SlicerVASST.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/VASST/SlicerVASST.git scmrevision master diff --git a/ARCHIVE/SupervisedSegmentationToolbox.s4ext b/ARCHIVE/SupervisedSegmentationToolbox.s4ext index dfbf4ec4f..61eaa1bbe 100644 --- a/ARCHIVE/SupervisedSegmentationToolbox.s4ext +++ b/ARCHIVE/SupervisedSegmentationToolbox.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/chalupaDaniel/SlicerSupervisedSegmentation.git scmrevision master diff --git a/ARCHIVE/VirtualFractureReconstruction.s4ext b/ARCHIVE/VirtualFractureReconstruction.s4ext index 1db909e7c..593178359 100644 --- a/ARCHIVE/VirtualFractureReconstruction.s4ext +++ b/ARCHIVE/VirtualFractureReconstruction.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/kfritscher/VirtualFractureReconstructionSlicerExtension scmrevision master diff --git a/ARCHIVE/WindowLevelEffect.s4ext b/ARCHIVE/WindowLevelEffect.s4ext index 7f2a01702..65efb3865 100644 --- a/ARCHIVE/WindowLevelEffect.s4ext +++ b/ARCHIVE/WindowLevelEffect.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/fedorov/WindowLevelEffect.git scmrevision master diff --git a/ARCHIVE/exStone.s4ext b/ARCHIVE/exStone.s4ext index 12fb5bd04..ae0f58544 100644 --- a/ARCHIVE/exStone.s4ext +++ b/ARCHIVE/exStone.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/qimo601/exStone.git scmrevision c71cd3885f79a7240a53daa12c6f02131289d4e4 diff --git a/ARCHIVE/lapdMouseBrowser.s4ext b/ARCHIVE/lapdMouseBrowser.s4ext index 9516284bf..a073d34a9 100644 --- a/ARCHIVE/lapdMouseBrowser.s4ext +++ b/ARCHIVE/lapdMouseBrowser.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lapdMouse/Slicer-lapdMouseBrowser.git scmrevision master diff --git a/AblationPlanner.s4ext b/AblationPlanner.s4ext index ebaec6c1a..dcb5de6a3 100644 --- a/AblationPlanner.s4ext +++ b/AblationPlanner.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/naterex23/SlicerAblationPlanner scmrevision main diff --git a/AirwaySegmentation.s4ext b/AirwaySegmentation.s4ext index 813b92827..58d0e3487 100644 --- a/AirwaySegmentation.s4ext +++ b/AirwaySegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SlicerAirwaySegmentation scmrevision master diff --git a/AnglePlanesExtension.s4ext b/AnglePlanesExtension.s4ext index 21fdb7753..147d22040 100644 --- a/AnglePlanesExtension.s4ext +++ b/AnglePlanesExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/AnglePlanes-Extension.git scmrevision master diff --git a/AnomalousFiltersExtension.s4ext b/AnomalousFiltersExtension.s4ext index 70f230cd7..25d0f65f6 100644 --- a/AnomalousFiltersExtension.s4ext +++ b/AnomalousFiltersExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/AnomalousFiltersExtension.git scmrevision master diff --git a/ArduinoController.s4ext b/ArduinoController.s4ext index 1cdcdd735..da11823ee 100644 --- a/ArduinoController.s4ext +++ b/ArduinoController.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/pzaffino/SlicerArduinoController.git scmrevision master diff --git a/AstmPhantomTest.s4ext b/AstmPhantomTest.s4ext index 1c20ee224..749117af9 100644 --- a/AstmPhantomTest.s4ext +++ b/AstmPhantomTest.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Atracsys/SlicerAstmPhantomTest.git scmrevision master diff --git a/Auto3dgm.s4ext b/Auto3dgm.s4ext index 026c5bc01..944a8c3da 100644 --- a/Auto3dgm.s4ext +++ b/Auto3dgm.s4ext @@ -1,4 +1,4 @@ -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ToothAndClaw/SlicerAuto3dgm scmrevision master diff --git a/AutomatedDentalTools.s4ext b/AutomatedDentalTools.s4ext index 85abee88f..5294b15fd 100644 --- a/AutomatedDentalTools.s4ext +++ b/AutomatedDentalTools.s4ext @@ -5,7 +5,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/SlicerAutomatedDentalTools.git scmrevision main diff --git a/BoneReconstructionPlanner.s4ext b/BoneReconstructionPlanner.s4ext index 908f62844..f65d59f67 100644 --- a/BoneReconstructionPlanner.s4ext +++ b/BoneReconstructionPlanner.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/SlicerBoneReconstructionPlanner.git scmrevision main diff --git a/BoneTextureExtension.s4ext b/BoneTextureExtension.s4ext index e9f21d8e3..3be15077b 100644 --- a/BoneTextureExtension.s4ext +++ b/BoneTextureExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Kitware/BoneTextureExtension.git scmrevision master diff --git a/BoneThicknessMapping.s4ext b/BoneThicknessMapping.s4ext index cf8c03a97..2262779eb 100644 --- a/BoneThicknessMapping.s4ext +++ b/BoneThicknessMapping.s4ext @@ -1,4 +1,4 @@ -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Auditory-Biophysics-Lab/SlicerBoneThicknessMappingExtension scmrevision master diff --git a/BrainVolumeRefinement.s4ext b/BrainVolumeRefinement.s4ext index 4982daee1..a440c6f40 100644 --- a/BrainVolumeRefinement.s4ext +++ b/BrainVolumeRefinement.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jamesobutler/SlicerBrainVolumeRefinement.git scmrevision main diff --git a/BreastImplantAnalyzer.s4ext b/BreastImplantAnalyzer.s4ext index 69840f441..f4e3ee8ae 100644 --- a/BreastImplantAnalyzer.s4ext +++ b/BreastImplantAnalyzer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerBreastImplantAnalyzer.git scmrevision master diff --git a/Breast_DCEMRI_FTV.s4ext b/Breast_DCEMRI_FTV.s4ext index 254198c63..8c034c769 100644 --- a/Breast_DCEMRI_FTV.s4ext +++ b/Breast_DCEMRI_FTV.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/rnadkarni2/SlicerBreast_DCEMRI_FTV scmrevision master diff --git a/CMFreg.s4ext b/CMFreg.s4ext index 7c1e82cef..c2dba535d 100644 --- a/CMFreg.s4ext +++ b/CMFreg.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/CMFreg.git scmrevision master diff --git a/CarreraSlice.s4ext b/CarreraSlice.s4ext index 042a45e5d..74232d5d4 100644 --- a/CarreraSlice.s4ext +++ b/CarreraSlice.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ikolesov/CarreraSlice.git scmrevision 40e62e857f2879c9a4d3a37f341c6421b6e79895 diff --git a/ChangeTracker.s4ext b/ChangeTracker.s4ext index 3841e7b08..85a0bf022 100644 --- a/ChangeTracker.s4ext +++ b/ChangeTracker.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/fedorov/ChangeTrackerPy.git scmrevision master diff --git a/CleverSeg.s4ext b/CleverSeg.s4ext index 4c7671dee..1dbaf0c25 100644 --- a/CleverSeg.s4ext +++ b/CleverSeg.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerCleverSegmentation.git scmrevision master diff --git a/ColocZStats.s4ext b/ColocZStats.s4ext index 40c13c78a..c1c594ea7 100644 --- a/ColocZStats.s4ext +++ b/ColocZStats.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ChenXiang96/SlicerColoc-Z-Stats.git scmrevision main diff --git a/CurveMaker.s4ext b/CurveMaker.s4ext index 0523600fc..fa4826606 100644 --- a/CurveMaker.s4ext +++ b/CurveMaker.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/tokjun/CurveMaker scmrevision 5619cf50e5e14bffa47dbc277e217c6bd50685dd diff --git a/DCMQI.s4ext b/DCMQI.s4ext index 6444ba14f..ef9f59e23 100644 --- a/DCMQI.s4ext +++ b/DCMQI.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/dcmqi.git scmrevision master diff --git a/DICOMwebBrowser.s4ext b/DICOMwebBrowser.s4ext index 6dececd68..6828cc772 100644 --- a/DICOMwebBrowser.s4ext +++ b/DICOMwebBrowser.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerDICOMwebBrowser scmrevision main diff --git a/DRRGenerator.s4ext b/DRRGenerator.s4ext index 0d2be6b17..8f6bb87f5 100644 --- a/DRRGenerator.s4ext +++ b/DRRGenerator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerDRRGenerator.git scmrevision master diff --git a/DSCMRIAnalysis.s4ext b/DSCMRIAnalysis.s4ext index 11e3d226c..ea9668c24 100644 --- a/DSCMRIAnalysis.s4ext +++ b/DSCMRIAnalysis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/DSC_Analysis.git scmrevision master diff --git a/DatabaseInteractor.s4ext b/DatabaseInteractor.s4ext index a3370bc57..52cb97f45 100644 --- a/DatabaseInteractor.s4ext +++ b/DatabaseInteractor.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/DatabaseInteractorExtension.git scmrevision master diff --git a/DebuggingTools.s4ext b/DebuggingTools.s4ext index 55944698e..4edd54c9a 100644 --- a/DebuggingTools.s4ext +++ b/DebuggingTools.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerRt/SlicerDebuggingTools.git scmrevision master diff --git a/DeveloperToolsForExtensions.s4ext b/DeveloperToolsForExtensions.s4ext index 610c7813b..e18ff5dfc 100644 --- a/DeveloperToolsForExtensions.s4ext +++ b/DeveloperToolsForExtensions.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SlicerDeveloperToolsForExtensions.git scmrevision master diff --git a/EasyClip.s4ext b/EasyClip.s4ext index 9e9ee8759..127279dae 100644 --- a/EasyClip.s4ext +++ b/EasyClip.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/EasyClip-Extension.git scmrevision master diff --git a/ErodeDilateLabel.s4ext b/ErodeDilateLabel.s4ext index 6e10887e9..cb490aa23 100644 --- a/ErodeDilateLabel.s4ext +++ b/ErodeDilateLabel.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/tokjun/ErodeDilateLabel.git scmrevision 3f4146ddaa712c8f0a8418f49b2624a1dd6fd20a diff --git a/FiducialsToModelDistance.s4ext b/FiducialsToModelDistance.s4ext index 313eaa71e..e9436582d 100644 --- a/FiducialsToModelDistance.s4ext +++ b/FiducialsToModelDistance.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ReynoldsJ20/SlicerFiducialsToModelDistance scmrevision master diff --git a/FilmDosimetryAnalysis.s4ext b/FilmDosimetryAnalysis.s4ext index 0952877ff..f891af84e 100644 --- a/FilmDosimetryAnalysis.s4ext +++ b/FilmDosimetryAnalysis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerRt/FilmDosimetryAnalysis.git scmrevision master diff --git a/GelDosimetryAnalysis.s4ext b/GelDosimetryAnalysis.s4ext index 5c2c88a27..ceafeee71 100644 --- a/GelDosimetryAnalysis.s4ext +++ b/GelDosimetryAnalysis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerRt/GelDosimetryAnalysis.git scmrevision master diff --git a/GeodesicSlicer.s4ext b/GeodesicSlicer.s4ext index 96e737658..37b52136d 100644 --- a/GeodesicSlicer.s4ext +++ b/GeodesicSlicer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/FredericBr/SlicerGeodesic scmrevision master diff --git a/GyroGuide.s4ext b/GyroGuide.s4ext index 13b255ab9..8011d40a5 100644 --- a/GyroGuide.s4ext +++ b/GyroGuide.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lpfang/GyroGuide.git scmrevision 8928999 diff --git a/ImageCompare.s4ext b/ImageCompare.s4ext index 17581bcf4..c7a57b357 100644 --- a/ImageCompare.s4ext +++ b/ImageCompare.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/pzaffino/SlicerImageCompare.git scmrevision master diff --git a/ImageMaker.s4ext b/ImageMaker.s4ext index 1460a79cf..845bd673e 100644 --- a/ImageMaker.s4ext +++ b/ImageMaker.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/finetjul/ImageMaker scmrevision 6293f99 diff --git a/IntensitySegmenter.s4ext b/IntensitySegmenter.s4ext index e7e4bc864..754cc08f7 100644 --- a/IntensitySegmenter.s4ext +++ b/IntensitySegmenter.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/IntensitySegmenter.git scmrevision release diff --git a/KidneyStoneCalculator.s4ext b/KidneyStoneCalculator.s4ext index fbcad2bd4..a79b52231 100644 --- a/KidneyStoneCalculator.s4ext +++ b/KidneyStoneCalculator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/fredericpanthier/SlicerKidneyStoneCalculator.git scmrevision 667aa7d8f74a50e6528a1e8aae7423d1fb66a93e diff --git a/LungCTAnalyzer.s4ext b/LungCTAnalyzer.s4ext index e31011d33..20161bd0f 100644 --- a/LungCTAnalyzer.s4ext +++ b/LungCTAnalyzer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/rbumm/SlicerLungCTAnalyzer scmrevision master diff --git a/MEMOS.s4ext b/MEMOS.s4ext index e4659d92d..45e915af5 100644 --- a/MEMOS.s4ext +++ b/MEMOS.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerMorph/SlicerMEMOS scmrevision main diff --git a/MONAILabel.s4ext b/MONAILabel.s4ext index 717f6086c..3fd9b72ce 100644 --- a/MONAILabel.s4ext +++ b/MONAILabel.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Project-MONAI/MONAILabel.git scmrevision main diff --git a/MRUSLandmarking.s4ext b/MRUSLandmarking.s4ext index 70a149a08..c7a8cd3f2 100644 --- a/MRUSLandmarking.s4ext +++ b/MRUSLandmarking.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/koegl/SlicerMRUSLandmarking.git scmrevision main diff --git a/MarkupsToModel.s4ext b/MarkupsToModel.s4ext index 3b9dd90b1..3e8496c91 100644 --- a/MarkupsToModel.s4ext +++ b/MarkupsToModel.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/SlicerMarkupsToModel scmrevision master diff --git a/MatlabBridge.s4ext b/MatlabBridge.s4ext index a50d875cf..c3f9fc90b 100644 --- a/MatlabBridge.s4ext +++ b/MatlabBridge.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkLab/SlicerMatlabBridge.git scmrevision master diff --git a/MeshStatisticsExtension.s4ext b/MeshStatisticsExtension.s4ext index af6d28b20..f9aa283b7 100644 --- a/MeshStatisticsExtension.s4ext +++ b/MeshStatisticsExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/MeshStatisticsExtension.git scmrevision master diff --git a/MeshToLabelMap.s4ext b/MeshToLabelMap.s4ext index a67d6f20d..e7b62c6eb 100644 --- a/MeshToLabelMap.s4ext +++ b/MeshToLabelMap.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/MeshToLabelMap.git scmrevision master diff --git a/ModelClip.s4ext b/ModelClip.s4ext index 9fd85ed0f..2a55c1b3d 100644 --- a/ModelClip.s4ext +++ b/ModelClip.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jamesobutler/ModelClip.git scmrevision main diff --git a/ModelCropper.s4ext b/ModelCropper.s4ext index a39c2e68a..57fb03d48 100644 --- a/ModelCropper.s4ext +++ b/ModelCropper.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/sebastianandress/Slicer-ModelCropper.git scmrevision master diff --git a/ModelToModelDistance.s4ext b/ModelToModelDistance.s4ext index f6a8fbaa1..4f0ff57ab 100644 --- a/ModelToModelDistance.s4ext +++ b/ModelToModelDistance.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/3DMetricTools.git scmrevision master diff --git a/NvidiaAIAssistedAnnotation.s4ext b/NvidiaAIAssistedAnnotation.s4ext index 769db8742..cc1601d8d 100644 --- a/NvidiaAIAssistedAnnotation.s4ext +++ b/NvidiaAIAssistedAnnotation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NVIDIA/ai-assisted-annotation-client.git scmrevision master diff --git a/OpenDose3D.s4ext b/OpenDose3D.s4ext index 86ff54b2f..59d5ac779 100644 --- a/OpenDose3D.s4ext +++ b/OpenDose3D.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://gitlab.com/opendose/opendose3d.git scmrevision master-stable diff --git a/OrthodonticAnalysis.s4ext b/OrthodonticAnalysis.s4ext index 0d416ea86..eb63a604c 100644 --- a/OrthodonticAnalysis.s4ext +++ b/OrthodonticAnalysis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/OrthodonticAnalysis/SlicerOrthodonticAnalysis scmrevision master diff --git a/OsteotomyPlanner.s4ext b/OsteotomyPlanner.s4ext index aeeb89511..41443ad18 100644 --- a/OsteotomyPlanner.s4ext +++ b/OsteotomyPlanner.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/OsteotomyPlanner.git scmrevision master diff --git a/PBNRR.s4ext b/PBNRR.s4ext index 88d561c15..cae07e281 100644 --- a/PBNRR.s4ext +++ b/PBNRR.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/aangelos28/PBNRR.git scmrevision b494c1e diff --git a/PET-IndiC.s4ext b/PET-IndiC.s4ext index 2774a8b77..cc72e43cc 100644 --- a/PET-IndiC.s4ext +++ b/PET-IndiC.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/PET-IndiC.git scmrevision master diff --git a/PETCPhantom.s4ext b/PETCPhantom.s4ext index 45e9456fa..f635c1408 100644 --- a/PETCPhantom.s4ext +++ b/PETCPhantom.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/SlicerPETPhantomAnalysis.git scmrevision master diff --git a/PETDICOMExtension.s4ext b/PETDICOMExtension.s4ext index 4523ddb82..7c1550055 100644 --- a/PETDICOMExtension.s4ext +++ b/PETDICOMExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/Slicer-PETDICOMExtension.git scmrevision master diff --git a/PETLiverUptakeMeasurement.s4ext b/PETLiverUptakeMeasurement.s4ext index f5178f973..fcc334fcf 100644 --- a/PETLiverUptakeMeasurement.s4ext +++ b/PETLiverUptakeMeasurement.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/PETLiverUptakeMeasurement scmrevision master diff --git a/PETTumorSegmentation.s4ext b/PETTumorSegmentation.s4ext index ec11f344d..81b48d4a1 100644 --- a/PETTumorSegmentation.s4ext +++ b/PETTumorSegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/PETTumorSegmentation.git scmrevision master diff --git a/ParallelProcessing.s4ext b/ParallelProcessing.s4ext index ad9a3af37..b3bff5104 100644 --- a/ParallelProcessing.s4ext +++ b/ParallelProcessing.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/pieper/SlicerParallelProcessing scmrevision master diff --git a/PathReconstruction.s4ext b/PathReconstruction.s4ext index dac02b8b3..43e17f32b 100644 --- a/PathReconstruction.s4ext +++ b/PathReconstruction.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/SlicerPathReconstruction.git scmrevision master diff --git a/PedicleScrewSimulator.s4ext b/PedicleScrewSimulator.s4ext index 944f0927e..d4d12a023 100644 --- a/PedicleScrewSimulator.s4ext +++ b/PedicleScrewSimulator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/PedicleScrewSimulator scmrevision master diff --git a/PerkTutor.s4ext b/PerkTutor.s4ext index 6b16a2767..46c2e02b6 100644 --- a/PerkTutor.s4ext +++ b/PerkTutor.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkTutor/PerkTutor.git scmrevision master diff --git a/PetSpectAnalysis.s4ext b/PetSpectAnalysis.s4ext index 44a82a56a..df7530f0a 100644 --- a/PetSpectAnalysis.s4ext +++ b/PetSpectAnalysis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/gti-fing/SlicerPetSpectAnalysis.git scmrevision master diff --git a/PickAndPaintExtension.s4ext b/PickAndPaintExtension.s4ext index be0aa9b8f..8eaa98ce0 100644 --- a/PickAndPaintExtension.s4ext +++ b/PickAndPaintExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/PickAndPaintExtension.git scmrevision master diff --git a/PkModeling.s4ext b/PkModeling.s4ext index eef943adc..fdd764b9a 100644 --- a/PkModeling.s4ext +++ b/PkModeling.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/PkModeling.git scmrevision master diff --git a/PortPlacement.s4ext b/PortPlacement.s4ext index 4a0190ee2..369305bed 100644 --- a/PortPlacement.s4ext +++ b/PortPlacement.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/PortPlacement.git scmrevision master diff --git a/PyTorch.s4ext b/PyTorch.s4ext index 55d988cb6..7ad3f1cf6 100644 --- a/PyTorch.s4ext +++ b/PyTorch.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/fepegar/SlicerPyTorch.git scmrevision master diff --git a/QuantitativeReporting.s4ext b/QuantitativeReporting.s4ext index 606ef50b8..5a329dbb6 100644 --- a/QuantitativeReporting.s4ext +++ b/QuantitativeReporting.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/QuantitativeReporting.git scmrevision master diff --git a/RVXLiverSegmentation.s4ext b/RVXLiverSegmentation.s4ext index 78b9eeebd..3a7327f7f 100644 --- a/RVXLiverSegmentation.s4ext +++ b/RVXLiverSegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/R-Vessel-X/SlicerRVXLiverSegmentation scmrevision main diff --git a/RawImageGuess.s4ext b/RawImageGuess.s4ext index 761b1b54f..4f1508fe9 100644 --- a/RawImageGuess.s4ext +++ b/RawImageGuess.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/acetylsalicyl/SlicerRawImageGuess scmrevision master diff --git a/RegistrationQA.s4ext b/RegistrationQA.s4ext index 305fc351c..28b62334b 100644 --- a/RegistrationQA.s4ext +++ b/RegistrationQA.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/gsi-biomotion/Slicer-RegQA.git scmrevision master diff --git a/SNRMeasurement.s4ext b/SNRMeasurement.s4ext index 4d187d65e..57822b54b 100644 --- a/SNRMeasurement.s4ext +++ b/SNRMeasurement.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SNRLab/SNRMeasurement scmrevision master diff --git a/SPHARM-PDM.s4ext b/SPHARM-PDM.s4ext index ed685f5c8..01ba0347a 100644 --- a/SPHARM-PDM.s4ext +++ b/SPHARM-PDM.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/SPHARM-PDM.git scmrevision master diff --git a/Sandbox.s4ext b/Sandbox.s4ext index 818e16034..02402a8a4 100644 --- a/Sandbox.s4ext +++ b/Sandbox.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkLab/SlicerSandbox.git scmrevision master diff --git a/ScatteredTransform.s4ext b/ScatteredTransform.s4ext index ca36f3d06..c09964d7d 100644 --- a/ScatteredTransform.s4ext +++ b/ScatteredTransform.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/grandwork2/ScatteredTransform scmrevision master diff --git a/Scoliosis.s4ext b/Scoliosis.s4ext index 2ff92afe4..2c46b7f06 100644 --- a/Scoliosis.s4ext +++ b/Scoliosis.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/Scoliosis.git scmrevision master diff --git a/SegmentEditorExtraEffects.s4ext b/SegmentEditorExtraEffects.s4ext index cefb0fe0b..09e57a0da 100644 --- a/SegmentEditorExtraEffects.s4ext +++ b/SegmentEditorExtraEffects.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerSegmentEditorExtraEffects scmrevision master diff --git a/SegmentGeometry.s4ext b/SegmentGeometry.s4ext index 53252203b..ebe851abd 100644 --- a/SegmentGeometry.s4ext +++ b/SegmentGeometry.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jmhuie/Slicer-SegmentGeometry.git scmrevision main diff --git a/SegmentMesher.s4ext b/SegmentMesher.s4ext index 4a95d8315..4be42425a 100644 --- a/SegmentMesher.s4ext +++ b/SegmentMesher.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerSegmentMesher.git scmrevision master diff --git a/SegmentRegistration.s4ext b/SegmentRegistration.s4ext index 9665a2a08..ed9a3cbfe 100644 --- a/SegmentRegistration.s4ext +++ b/SegmentRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerRt/SegmentRegistration.git scmrevision HEAD diff --git a/SegmentationAidedRegistration.s4ext b/SegmentationAidedRegistration.s4ext index 9e79aa786..f171c2f2f 100644 --- a/SegmentationAidedRegistration.s4ext +++ b/SegmentationAidedRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/gaoyi/SegmentationAidedRegistration.git scmrevision e1ce457eb08e69ca49083b8998631bb43f203295 diff --git a/SequenceRegistration.s4ext b/SequenceRegistration.s4ext index 16c957627..970ac6ec7 100644 --- a/SequenceRegistration.s4ext +++ b/SequenceRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/moselhy/SlicerSequenceRegistration scmrevision master diff --git a/ShapePopulationViewer.s4ext b/ShapePopulationViewer.s4ext index a9963d096..b4397a53a 100644 --- a/ShapePopulationViewer.s4ext +++ b/ShapePopulationViewer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NIRALUser/ShapePopulationViewer.git scmrevision master diff --git a/ShapeRegressionExtension.s4ext b/ShapeRegressionExtension.s4ext index fa010f8d6..b7ed6346c 100644 --- a/ShapeRegressionExtension.s4ext +++ b/ShapeRegressionExtension.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/ShapeRegressionExtension.git scmrevision master diff --git a/ShapeVariationAnalyzer.s4ext b/ShapeVariationAnalyzer.s4ext index b33ea5def..2f12cb37b 100644 --- a/ShapeVariationAnalyzer.s4ext +++ b/ShapeVariationAnalyzer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/ShapeVariationAnalyzer.git scmrevision master diff --git a/SkeletalRepresentation.s4ext b/SkeletalRepresentation.s4ext index 70dee458a..2c047cd09 100644 --- a/SkeletalRepresentation.s4ext +++ b/SkeletalRepresentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/SlicerSkeletalRepresentation.git scmrevision master diff --git a/SkullStripper.s4ext b/SkullStripper.s4ext index 912ef0f48..fbb286387 100644 --- a/SkullStripper.s4ext +++ b/SkullStripper.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SkullStripper.git scmrevision master diff --git a/SlicerAIGT.s4ext b/SlicerAIGT.s4ext index 9415dc6a3..950556e7f 100644 --- a/SlicerAIGT.s4ext +++ b/SlicerAIGT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/aigt.git scmrevision master diff --git a/SlicerANTs.s4ext b/SlicerANTs.s4ext index 04ec581da..9211f4a61 100644 --- a/SlicerANTs.s4ext +++ b/SlicerANTs.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/netstim/SlicerANTs.git scmrevision master diff --git a/SlicerAutoscroll.s4ext b/SlicerAutoscroll.s4ext index 5e15fd932..929a48f8a 100644 --- a/SlicerAutoscroll.s4ext +++ b/SlicerAutoscroll.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerAutoscroll scmrevision master diff --git a/SlicerBatchAnonymize.s4ext b/SlicerBatchAnonymize.s4ext index 8dc344034..0feb3666d 100644 --- a/SlicerBatchAnonymize.s4ext +++ b/SlicerBatchAnonymize.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/hina-shah/SlicerBatchAnonymize.git scmrevision main diff --git a/SlicerCMF.s4ext b/SlicerCMF.s4ext index be9eb0169..6161812b8 100644 --- a/SlicerCMF.s4ext +++ b/SlicerCMF.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/SlicerCMF.git scmrevision master diff --git a/SlicerCaseIterator.s4ext b/SlicerCaseIterator.s4ext index 1cc1fa8f3..1ff858277 100644 --- a/SlicerCaseIterator.s4ext +++ b/SlicerCaseIterator.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/JoostJM/SlicerCaseIterator.git scmrevision master diff --git a/SlicerCervicalSpine.s4ext b/SlicerCervicalSpine.s4ext index 9c891bef8..a54c7e61a 100644 --- a/SlicerCervicalSpine.s4ext +++ b/SlicerCervicalSpine.s4ext @@ -3,7 +3,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/MedicalImageAnalysisTutorials/SlicerCervicalSpine scmrevision master diff --git a/SlicerCochlea.s4ext b/SlicerCochlea.s4ext index d63031e92..3306dce0b 100644 --- a/SlicerCochlea.s4ext +++ b/SlicerCochlea.s4ext @@ -3,7 +3,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/MedicalImageAnalysisTutorials/SlicerCochlea scmrevision master diff --git a/SlicerDcm2nii.s4ext b/SlicerDcm2nii.s4ext index a1dae8442..b07fd3ce5 100644 --- a/SlicerDcm2nii.s4ext +++ b/SlicerDcm2nii.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerDMRI/SlicerDcm2nii.git scmrevision master diff --git a/SlicerDensityLungSegmentation.s4ext b/SlicerDensityLungSegmentation.s4ext index 0cdb3f740..f854eae10 100644 --- a/SlicerDensityLungSegmentation.s4ext +++ b/SlicerDensityLungSegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/pzaffino/SlicerDensityLungSegmentation.git scmrevision main diff --git a/SlicerDentalModelSeg.s4ext b/SlicerDentalModelSeg.s4ext index 0aa9a8bc8..59e565a5a 100644 --- a/SlicerDentalModelSeg.s4ext +++ b/SlicerDentalModelSeg.s4ext @@ -5,7 +5,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/DCBIA-OrthoLab/SlicerDentalModelSeg.git scmrevision main diff --git a/SlicerDevelopmentToolbox.s4ext b/SlicerDevelopmentToolbox.s4ext index 9e7a3c329..cfc2db672 100644 --- a/SlicerDevelopmentToolbox.s4ext +++ b/SlicerDevelopmentToolbox.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/SlicerDevelopmentToolbox.git scmrevision master diff --git a/SlicerElastix.s4ext b/SlicerElastix.s4ext index 2f6425a48..069dc9c3b 100644 --- a/SlicerElastix.s4ext +++ b/SlicerElastix.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/lassoan/SlicerElastix.git scmrevision master diff --git a/SlicerFab.s4ext b/SlicerFab.s4ext index f50894cf5..df277195b 100644 --- a/SlicerFab.s4ext +++ b/SlicerFab.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerFab/SlicerFab scmrevision master diff --git a/SlicerFreeSurfer.s4ext b/SlicerFreeSurfer.s4ext index 11921c6f6..eca4bbd9b 100644 --- a/SlicerFreeSurfer.s4ext +++ b/SlicerFreeSurfer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkLab/SlicerFreeSurfer.git scmrevision master diff --git a/SlicerHeart.s4ext b/SlicerHeart.s4ext index d848de25b..59fd83185 100644 --- a/SlicerHeart.s4ext +++ b/SlicerHeart.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerHeart/SlicerHeart.git scmrevision master diff --git a/SlicerIGSIO.s4ext b/SlicerIGSIO.s4ext index 0eaec6bec..37ad84568 100644 --- a/SlicerIGSIO.s4ext +++ b/SlicerIGSIO.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/IGSIO/SlicerIGSIO.git scmrevision master diff --git a/SlicerIGT.s4ext b/SlicerIGT.s4ext index 3cf7bc2ba..5a71ea597 100644 --- a/SlicerIGT.s4ext +++ b/SlicerIGT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/SlicerIGT.git scmrevision master diff --git a/SlicerITKUltrasound.s4ext b/SlicerITKUltrasound.s4ext index 9a94aaa22..6194641e8 100644 --- a/SlicerITKUltrasound.s4ext +++ b/SlicerITKUltrasound.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/SlicerITKUltrasound scmrevision master diff --git a/SlicerJupyter.s4ext b/SlicerJupyter.s4ext index 0e60a6a2a..b881bad79 100644 --- a/SlicerJupyter.s4ext +++ b/SlicerJupyter.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SlicerJupyter.git scmrevision master diff --git a/SlicerLayoutButtons.s4ext b/SlicerLayoutButtons.s4ext index 2df568513..2aa6c99a3 100644 --- a/SlicerLayoutButtons.s4ext +++ b/SlicerLayoutButtons.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/SlicerLayoutButtons.git scmrevision master diff --git a/SlicerLiver.s4ext b/SlicerLiver.s4ext index a062295b7..441911ed4 100644 --- a/SlicerLiver.s4ext +++ b/SlicerLiver.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ALive-research/Slicer-Liver scmrevision master diff --git a/SlicerLookingGlass.s4ext b/SlicerLookingGlass.s4ext index f1ead7173..1ab1fffcc 100644 --- a/SlicerLookingGlass.s4ext +++ b/SlicerLookingGlass.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/SlicerLookingGlass.git scmrevision master diff --git a/SlicerMorph.s4ext b/SlicerMorph.s4ext index 7991e5563..2bf8db650 100644 --- a/SlicerMorph.s4ext +++ b/SlicerMorph.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerMorph/SlicerMorph.git scmrevision master diff --git a/SlicerNetstim.s4ext b/SlicerNetstim.s4ext index 7d1d1ebcf..1945388b3 100644 --- a/SlicerNetstim.s4ext +++ b/SlicerNetstim.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/netstim/SlicerNetstim.git scmrevision master diff --git a/SlicerOpenAnatomy.s4ext b/SlicerOpenAnatomy.s4ext index fdce7e0ce..13b6e7828 100644 --- a/SlicerOpenAnatomy.s4ext +++ b/SlicerOpenAnatomy.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkLab/SlicerOpenAnatomy scmrevision master diff --git a/SlicerOpenCV.s4ext b/SlicerOpenCV.s4ext index aefbff68d..706d60c9f 100644 --- a/SlicerOpenCV.s4ext +++ b/SlicerOpenCV.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/Slicer/SlicerOpenCV.git scmrevision master diff --git a/SlicerOpenIGTLink.s4ext b/SlicerOpenIGTLink.s4ext index 2ab722381..90104abe3 100644 --- a/SlicerOpenIGTLink.s4ext +++ b/SlicerOpenIGTLink.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/openigtlink/SlicerOpenIGTLink.git scmrevision master diff --git a/SlicerProstate.s4ext b/SlicerProstate.s4ext index 22ff3b1e2..7b0a3cbcf 100644 --- a/SlicerProstate.s4ext +++ b/SlicerProstate.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerProstate/SlicerProstate.git scmrevision master diff --git a/SlicerProstateAblation.s4ext b/SlicerProstateAblation.s4ext index 7dc5dc5ac..0538c5f8a 100644 --- a/SlicerProstateAblation.s4ext +++ b/SlicerProstateAblation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerProstate/SlicerProstateAblation.git scmrevision master diff --git a/SlicerRT.s4ext b/SlicerRT.s4ext index ad1b08ba1..040a67854 100644 --- a/SlicerRT.s4ext +++ b/SlicerRT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerRt/SlicerRT.git scmrevision master diff --git a/SlicerRadiomics.s4ext b/SlicerRadiomics.s4ext index 83886a7f0..94bcbf7c8 100644 --- a/SlicerRadiomics.s4ext +++ b/SlicerRadiomics.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/AIM-Harvard/SlicerRadiomics.git scmrevision master diff --git a/SlicerRegularizedFastMarching.s4ext b/SlicerRegularizedFastMarching.s4ext index 19e8dd845..f3d0cd880 100644 --- a/SlicerRegularizedFastMarching.s4ext +++ b/SlicerRegularizedFastMarching.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jamesobutler/SlicerRegularizedFastMarching scmrevision main diff --git a/SlicerTissueSegmentation.s4ext b/SlicerTissueSegmentation.s4ext index cc9e88d8f..cfbabf639 100644 --- a/SlicerTissueSegmentation.s4ext +++ b/SlicerTissueSegmentation.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/MarinaSandonis/SlicerTissueSegmentation scmrevision main diff --git a/SlicerToKiwiExporter.s4ext b/SlicerToKiwiExporter.s4ext index b8e8c25e3..a3838c993 100644 --- a/SlicerToKiwiExporter.s4ext +++ b/SlicerToKiwiExporter.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/jcfr/SlicerToKiwiExporter.git scmrevision master diff --git a/SlicerVMTK.s4ext b/SlicerVMTK.s4ext index 1f73b30f4..6baf5eca6 100644 --- a/SlicerVMTK.s4ext +++ b/SlicerVMTK.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/vmtk/SlicerExtension-VMTK scmrevision master diff --git a/SlicerVirtualReality.s4ext b/SlicerVirtualReality.s4ext index bbf2439f3..9b507a732 100644 --- a/SlicerVirtualReality.s4ext +++ b/SlicerVirtualReality.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/KitwareMedical/SlicerVirtualReality.git scmrevision master diff --git a/SoundControl.s4ext b/SoundControl.s4ext index de7718214..85227f731 100644 --- a/SoundControl.s4ext +++ b/SoundControl.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerIGT/SlicerSoundControl scmrevision master diff --git a/SurfaceFragmentsRegistration.s4ext b/SurfaceFragmentsRegistration.s4ext index 2d609da0a..8d11fbe1a 100644 --- a/SurfaceFragmentsRegistration.s4ext +++ b/SurfaceFragmentsRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/sebastianandress/Slicer-SurfaceFragmentsRegistration.git scmrevision master diff --git a/SurfaceMarkup.s4ext b/SurfaceMarkup.s4ext index 404de2c00..9c155bf50 100644 --- a/SurfaceMarkup.s4ext +++ b/SurfaceMarkup.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerHeart/SlicerSurfaceMarkup.git scmrevision master diff --git a/SurfaceWrapSolidify.s4ext b/SurfaceWrapSolidify.s4ext index c28ae156d..a9d30f4d6 100644 --- a/SurfaceWrapSolidify.s4ext +++ b/SurfaceWrapSolidify.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/sebastianandress/Slicer-SurfaceWrapSolidify.git scmrevision master diff --git a/T1Mapping.s4ext b/T1Mapping.s4ext index 3bacd82c6..bb4dfc27f 100644 --- a/T1Mapping.s4ext +++ b/T1Mapping.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/T1Mapping.git scmrevision f180a63 diff --git a/T1_ECVMapping.s4ext b/T1_ECVMapping.s4ext index 54caece25..bb8a21e13 100644 --- a/T1_ECVMapping.s4ext +++ b/T1_ECVMapping.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/RivettiLuciano/SlicerT1_ECVMapping.git scmrevision master diff --git a/T2mapping.s4ext b/T2mapping.s4ext index 07fc5d1d9..dd0a2e5c8 100644 --- a/T2mapping.s4ext +++ b/T2mapping.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/gattia/Slicer-T2mapping scmrevision master diff --git a/TCIABrowser.s4ext b/TCIABrowser.s4ext index 5da4dc44c..64ad49483 100644 --- a/TCIABrowser.s4ext +++ b/TCIABrowser.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/QIICR/TCIABrowser.git scmrevision master diff --git a/TITAN.s4ext b/TITAN.s4ext index e4595b36f..422daf2bb 100644 --- a/TITAN.s4ext +++ b/TITAN.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerMicro/Slicer-TITAN scmrevision master diff --git a/TOMAAT.s4ext b/TOMAAT.s4ext index b644aa31c..1e535274a 100644 --- a/TOMAAT.s4ext +++ b/TOMAAT.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/faustomilletari/TOMAAT-Slicer.git scmrevision master diff --git a/TorchIO.s4ext b/TorchIO.s4ext index 580b5eac3..f42e4f4ee 100644 --- a/TorchIO.s4ext +++ b/TorchIO.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/fepegar/SlicerTorchIO.git scmrevision master diff --git a/UKFTractography.s4ext b/UKFTractography.s4ext index 41d023ad7..2698d111c 100644 --- a/UKFTractography.s4ext +++ b/UKFTractography.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/pnlbwh/ukftractography.git diff --git a/VASSTAlgorithms.s4ext b/VASSTAlgorithms.s4ext index a41b3c877..2f3dc5e73 100644 --- a/VASSTAlgorithms.s4ext +++ b/VASSTAlgorithms.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/VASST/VASSTAlgorithms.git scmrevision 4.11 diff --git a/VolumeClip.s4ext b/VolumeClip.s4ext index fa52a25a9..2af00c868 100644 --- a/VolumeClip.s4ext +++ b/VolumeClip.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/PerkLab/SlicerVolumeClip.git scmrevision master diff --git a/XNATSlicer.s4ext b/XNATSlicer.s4ext index d46f95ce1..f50661f51 100644 --- a/XNATSlicer.s4ext +++ b/XNATSlicer.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # Commmit (8-25-14) -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/NrgXnat/XNATSlicer.git scmrevision master diff --git a/ZFrameRegistration.s4ext b/ZFrameRegistration.s4ext index 17da5d72e..97e2d6273 100644 --- a/ZFrameRegistration.s4ext +++ b/ZFrameRegistration.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/SlicerProstate/SlicerZFrameRegistration.git scmrevision master diff --git a/flywheel_connect.s4ext b/flywheel_connect.s4ext index addd51151..38ecebd2b 100644 --- a/flywheel_connect.s4ext +++ b/flywheel_connect.s4ext @@ -4,7 +4,7 @@ # - the value can be blank # -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://gitlab.com/flywheel-io/scientific-solutions/app/slicer_flywheel_connect.git scmrevision main diff --git a/slicerPRISMRendering.s4ext b/slicerPRISMRendering.s4ext index 690f7015b..155f7dac8 100644 --- a/slicerPRISMRendering.s4ext +++ b/slicerPRISMRendering.s4ext @@ -1,4 +1,4 @@ -# This is source code manager (i.e. svn) +# This is source code manager scm git scmurl https://github.com/ETS-vis-interactive/SlicerPRISMRendering scmrevision master From 5e54b30c86c718e947eedb0fea2226fa5938b51e Mon Sep 17 00:00:00 2001 From: James Butler Date: Fri, 14 Apr 2023 13:25:34 -0400 Subject: [PATCH 22/33] ENH: Update SlicerPyTorch to use main branch --- PyTorch.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PyTorch.s4ext b/PyTorch.s4ext index 7ad3f1cf6..551371115 100644 --- a/PyTorch.s4ext +++ b/PyTorch.s4ext @@ -7,7 +7,7 @@ # This is source code manager scm git scmurl https://github.com/fepegar/SlicerPyTorch.git -scmrevision master +scmrevision main # list dependencies # - These should be names of other modules that have .s4ext files From 96a7d5086ed9938b653fc9d5e009db52fe1a9807 Mon Sep 17 00:00:00 2001 From: James Butler Date: Tue, 18 Apr 2023 13:02:01 -0400 Subject: [PATCH 23/33] ENH: Update TorchIO to use main branch The master branch was renamed to main. --- TorchIO.s4ext | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/TorchIO.s4ext b/TorchIO.s4ext index f42e4f4ee..3f1d79acb 100644 --- a/TorchIO.s4ext +++ b/TorchIO.s4ext @@ -7,7 +7,7 @@ # This is source code manager scm git scmurl https://github.com/fepegar/SlicerTorchIO.git -scmrevision master +scmrevision main # list dependencies # - These should be names of other modules that have .s4ext files From 1aacbe9243133f37e851ee6c5278580eb111db42 Mon Sep 17 00:00:00 2001 From: Anna <17569461+zapaishchykova@users.noreply.github.com> Date: Tue, 4 Apr 2023 05:54:41 -0400 Subject: [PATCH 24/33] Add SlicerLikertDLrating extension SlicerLikertDLrating extension for fast clinician review of Deep-learning-generated masks using Likert-type score (4 Scale, 1: Acceptable, no changes; 2: Acceptable, minor changes; 3: Unacceptable, major changes; 4: Unacceptable, not visible/wrong location), with segment editor functionality. The dataset loads in one batch with no need to load masks and volumes separately. The results are saved in a CSV file, which can be used for further analysis. --- SlicerLikertDLrating.s4ext | 36 ++++++++++++++++++++++++++++++++++++ 1 file changed, 36 insertions(+) create mode 100644 SlicerLikertDLrating.s4ext diff --git a/SlicerLikertDLrating.s4ext b/SlicerLikertDLrating.s4ext new file mode 100644 index 000000000..ffe4fa145 --- /dev/null +++ b/SlicerLikertDLrating.s4ext @@ -0,0 +1,36 @@ +# This is source code manager +scm git +scmurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating +scmrevision master + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends SegmentEditor + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/zapaishchykova/Slicer-Likert-DL-rating + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +contributors Anna Zapaishchykova ([AIM lab,] BWH), Dr. Benjamin H. Kann ([AIM lab,] BWH) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Segmentation + +# url to icon (png, size 128x128 pixels) +iconurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/Resources/Icons/NiftyViewer.png + +# Give people an idea what to expect from this code +status beta + +# One line stating what the module does +description SlicerLikertDLrating allows fast clinician review of DL-generated masks using Likert-type score + +# Space separated list of urls +screenshoturls https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/pics/screenshot.jpg + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From 91d0b8cd5c0e6c2133ed1dc06fb083d958ee4c6a Mon Sep 17 00:00:00 2001 From: Anna <17569461+zapaishchykova@users.noreply.github.com> Date: Wed, 5 Apr 2023 05:43:04 -0400 Subject: [PATCH 25/33] Update SlicerLikertDLrating.s4ext --- SlicerLikertDLrating.s4ext | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/SlicerLikertDLrating.s4ext b/SlicerLikertDLrating.s4ext index ffe4fa145..dfcb36851 100644 --- a/SlicerLikertDLrating.s4ext +++ b/SlicerLikertDLrating.s4ext @@ -6,7 +6,7 @@ scmrevision master # list dependencies # - These should be names of other modules that have .s4ext files # - The dependencies will be built first -depends SegmentEditor +depends NA # Inner build directory (default is ".") build_subdirectory . @@ -21,7 +21,7 @@ contributors Anna Zapaishchykova ([AIM lab,] BWH), Dr. Benjamin H. Kann ([AIM la category Segmentation # url to icon (png, size 128x128 pixels) -iconurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/Resources/Icons/NiftyViewer.png +iconurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/SlicerSegReview.png # Give people an idea what to expect from this code status beta From a140b7d89fb0df19b2c157b8cdc0cd2da62bc515 Mon Sep 17 00:00:00 2001 From: Anna <17569461+zapaishchykova@users.noreply.github.com> Date: Wed, 5 Apr 2023 05:45:00 -0400 Subject: [PATCH 26/33] Rename SlicerLikertDLrating.s4ext to SlicerSegReview.s4ext --- SlicerLikertDLrating.s4ext => SlicerSegReview.s4ext | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename SlicerLikertDLrating.s4ext => SlicerSegReview.s4ext (100%) diff --git a/SlicerLikertDLrating.s4ext b/SlicerSegReview.s4ext similarity index 100% rename from SlicerLikertDLrating.s4ext rename to SlicerSegReview.s4ext From 9999e8cea4f79156a6b0a50c7344971638f9e264 Mon Sep 17 00:00:00 2001 From: Anna <17569461+zapaishchykova@users.noreply.github.com> Date: Wed, 5 Apr 2023 05:48:14 -0400 Subject: [PATCH 27/33] Update SlicerSegReview.s4ext --- SlicerSegReview.s4ext | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/SlicerSegReview.s4ext b/SlicerSegReview.s4ext index dfcb36851..d571009cc 100644 --- a/SlicerSegReview.s4ext +++ b/SlicerSegReview.s4ext @@ -21,7 +21,7 @@ contributors Anna Zapaishchykova ([AIM lab,] BWH), Dr. Benjamin H. Kann ([AIM la category Segmentation # url to icon (png, size 128x128 pixels) -iconurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/SlicerSegReview.png +iconurl https://raw.githubusercontent.com/zapaishchykova/Slicer-Likert-DL-rating/main/SlicerSegReview.png # Give people an idea what to expect from this code status beta @@ -30,7 +30,7 @@ status beta description SlicerLikertDLrating allows fast clinician review of DL-generated masks using Likert-type score # Space separated list of urls -screenshoturls https://github.com/zapaishchykova/Slicer-Likert-DL-rating/blob/main/pics/screenshot.jpg +screenshoturls https://raw.githubusercontent.com/zapaishchykova/Slicer-Likert-DL-rating/main/pics/screenshot.jpg # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From 227db4b8f9a53a50e54c2870e34a37ef414508a3 Mon Sep 17 00:00:00 2001 From: ZhyBrian <114274460+ZhyBrian@users.noreply.github.com> Date: Tue, 9 May 2023 21:31:50 +0800 Subject: [PATCH 28/33] Add new extension AI Assisted BUS Diagnosis for 3D Slicer (#1920) * Add new extension AI Assisted BUS Diagnosis * change the new extension name to SlicerAIBreastUSDiagnosis * remove old * change the new extension name to BreastUltrasoundAnalysis * update: depend on PyTorch --- BreastUltrasoundAnalysis.s4ext | 44 ++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 BreastUltrasoundAnalysis.s4ext diff --git a/BreastUltrasoundAnalysis.s4ext b/BreastUltrasoundAnalysis.s4ext new file mode 100644 index 000000000..35b882dc9 --- /dev/null +++ b/BreastUltrasoundAnalysis.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager (i.e. svn) +scm git +scmurl https://github.com/ZhyBrian/SlicerBreastUltrasoundAnalysis.git +scmrevision master + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends PyTorch + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/ZhyBrian/SlicerBreastUltrasoundAnalysis + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Yi Zhang (Chongqing University, China), Xiaojun Chen (Shanghai Jiao Tong University, China) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Utilities + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/ZhyBrian/SlicerBreastUltrasoundAnalysis/master/Screenshots/BUS_Diagnosis_icon.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status + +# One line stating what the module does +description This module is designed to help physicians diagnose intramammary lesions based on breast ultrasound images with nodules. + +# Space separated list of urls +screenshoturls https://raw.githubusercontent.com/ZhyBrian/SlicerBreastUltrasoundAnalysis/master/Screenshots/overview.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From fe6dd1fea1e1638d447cef8753c44efbf374cbe2 Mon Sep 17 00:00:00 2001 From: Anna <17569461+zapaishchykova@users.noreply.github.com> Date: Tue, 9 May 2023 11:51:24 -0400 Subject: [PATCH 29/33] Rename SlicerSegReview to SegmentationReview The underlying GitHub project was renamed Co-authored-by: Jean-Christophe Fillion-Robin --- SlicerSegReview.s4ext => SegmentationReview.s4ext | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) rename SlicerSegReview.s4ext => SegmentationReview.s4ext (50%) diff --git a/SlicerSegReview.s4ext b/SegmentationReview.s4ext similarity index 50% rename from SlicerSegReview.s4ext rename to SegmentationReview.s4ext index d571009cc..5f0ee5c2f 100644 --- a/SlicerSegReview.s4ext +++ b/SegmentationReview.s4ext @@ -1,7 +1,7 @@ # This is source code manager scm git -scmurl https://github.com/zapaishchykova/Slicer-Likert-DL-rating -scmrevision master +scmurl https://github.com/zapaishchykova/SegmentationReview +scmrevision main # list dependencies # - These should be names of other modules that have .s4ext files @@ -12,25 +12,25 @@ depends NA build_subdirectory . # homepage -homepage https://github.com/zapaishchykova/Slicer-Likert-DL-rating +homepage https://github.com/zapaishchykova/SegmentationReview # Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) -contributors Anna Zapaishchykova ([AIM lab,] BWH), Dr. Benjamin H. Kann ([AIM lab,] BWH) +contributors Anna Zapaishchykova (AIM Lab, BWH), Dr. Benjamin H. Kann (AIM Lab, BWH) # Match category in the xml description of the module (where it shows up in Modules menu) category Segmentation # url to icon (png, size 128x128 pixels) -iconurl https://raw.githubusercontent.com/zapaishchykova/Slicer-Likert-DL-rating/main/SlicerSegReview.png +iconurl https://raw.github.com/zapaishchykova/SegmentationReview/bd21693438a9bafed7e3a74313c0129860c9a74b/SlicerSegReview/Resources/Icons/SlicerSegReview.png # Give people an idea what to expect from this code status beta # One line stating what the module does -description SlicerLikertDLrating allows fast clinician review of DL-generated masks using Likert-type score +description The SegmentationReview extension enables clinician to quickly review of Deep-learning generated segmentations using Likert-type score. The dataset loads in one batch with no need to load masks and volumes separately. The results are saved in a csv file, which can be used for further analysis. # Space separated list of urls -screenshoturls https://raw.githubusercontent.com/zapaishchykova/Slicer-Likert-DL-rating/main/pics/screenshot.jpg +screenshoturls https://raw.githubusercontent.com/zapaishchykova/SegmentationReview/bd21693438a9bafed7e3a74313c0129860c9a74b/pics/screenshot.png # 0 or 1: Define if the extension should be enabled after its installation. enabled 1 From 890097edeafbc64a34d86814411c4838b9304996 Mon Sep 17 00:00:00 2001 From: seanchoi0519 <33897705+seanchoi0519@users.noreply.github.com> Date: Wed, 31 May 2023 18:17:50 -0700 Subject: [PATCH 30/33] Add files via upload --- QuickAlignExtension.s4ext | 38 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 38 insertions(+) create mode 100644 QuickAlignExtension.s4ext diff --git a/QuickAlignExtension.s4ext b/QuickAlignExtension.s4ext new file mode 100644 index 000000000..ef361c115 --- /dev/null +++ b/QuickAlignExtension.s4ext @@ -0,0 +1,38 @@ +scm git +scmurl https://github.com/seanchoi0519/SlicerQuickAlign.git +scmrevision master + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends NA + +# Inner build directory (default is .) +build_subdirectory . + +# homepage +homepage https://github.com/seanchoi0519/SlicerQuickAlign.git + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Arthur Porto (LSU), Sara Rolfe (UW), Murat Maga (SCRI), Dr. Sean Choi (UQ) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Registration + +# url to icon (png, size 128x128 pixels) +iconurl https://raw.githubusercontent.com/seanchoi0519/SlicerQuickAlign/master/QuickAlign.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status Beta + +# One line stating what the module does +description QuickAlign allows a quick, simple alignment and comparison of two 3D models aided by ALPACA and custom display modes. + +# Space separated list of urls +screenshoturls https://raw.githubusercontent.com/seanchoi0519/SlicerQuickAlign/master/QuickAlign.png + + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From de1d373968350c1713dd18866cb9b4a4581e79de Mon Sep 17 00:00:00 2001 From: seanchoi0519 <33897705+seanchoi0519@users.noreply.github.com> Date: Wed, 31 May 2023 18:18:53 -0700 Subject: [PATCH 31/33] Rename QuickAlignExtension.s4ext to QuickAlign.s4ext --- QuickAlignExtension.s4ext => QuickAlign.s4ext | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename QuickAlignExtension.s4ext => QuickAlign.s4ext (100%) diff --git a/QuickAlignExtension.s4ext b/QuickAlign.s4ext similarity index 100% rename from QuickAlignExtension.s4ext rename to QuickAlign.s4ext From 466d0f864072966f730d5f2d9c357a16c213c284 Mon Sep 17 00:00:00 2001 From: Thibault-Pelletier <58782295+Thibault-Pelletier@users.noreply.github.com> Date: Thu, 8 Jun 2023 17:28:10 +0200 Subject: [PATCH 32/33] ENH: Add RVXVesselnessFilters extension (#1912) --- RVXVesselnessFilters.s4ext | 44 ++++++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 RVXVesselnessFilters.s4ext diff --git a/RVXVesselnessFilters.s4ext b/RVXVesselnessFilters.s4ext new file mode 100644 index 000000000..f9703244e --- /dev/null +++ b/RVXVesselnessFilters.s4ext @@ -0,0 +1,44 @@ +# +# First token of each non-comment line is the keyword and the rest of the line +# (including spaces) is the value. +# - the value can be blank +# + +# This is source code manager (i.e. svn) +scm git +scmurl https://github.com/R-Vessel-X/SlicerRVXVesselnessFilters +scmrevision main + +# list dependencies +# - These should be names of other modules that have .s4ext files +# - The dependencies will be built first +depends NA + +# Inner build directory (default is ".") +build_subdirectory . + +# homepage +homepage https://github.com/R-Vessel-X/SlicerRVXVesselnessFilters + +# Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) +# For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) +contributors Jonas Lamy (LIRIS), Odyssée Merveille (CREATIS), Bertrand Kerautret (LIRIS), Nicolas Passat (CRESTIC), Thibault Pelletier (Kitware SAS), Laurenn Lam (Kitware SAS) + +# Match category in the xml description of the module (where it shows up in Modules menu) +category Filtering.Vesselness + +# url to icon (png, size 128x128 pixels) +iconurl https://github.com/R-Vessel-X/SlicerRVXLiverSegmentation/raw/main/RVXLiverSegmentation/Resources/Icons/RVXLiverSegmentation.png + +# Give people an idea what to expect from this code +# - Is it just a test or something you stand behind? +status beta + +# One line stating what the module does +description Hessian Vesselness Filters extension + +# Space separated list of urls +screenshoturls https://github.com/R-Vessel-X/SlicerRVXVesselnessFilters/raw/main/Screenshots/RVX_vesselness_example.png + +# 0 or 1: Define if the extension should be enabled after its installation. +enabled 1 From 9c04abe295533ed40a15915b540cbbda61d9fa9c Mon Sep 17 00:00:00 2001 From: seanchoi0519 <33897705+seanchoi0519@users.noreply.github.com> Date: Thu, 22 Jun 2023 22:14:12 -0700 Subject: [PATCH 33/33] Update and rename QuickAlign.s4ext to QuickModelAlign.s4ext --- QuickAlign.s4ext => QuickModelAlign.s4ext | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) rename QuickAlign.s4ext => QuickModelAlign.s4ext (82%) diff --git a/QuickAlign.s4ext b/QuickModelAlign.s4ext similarity index 82% rename from QuickAlign.s4ext rename to QuickModelAlign.s4ext index ef361c115..196b3ed94 100644 --- a/QuickAlign.s4ext +++ b/QuickModelAlign.s4ext @@ -1,5 +1,5 @@ scm git -scmurl https://github.com/seanchoi0519/SlicerQuickAlign.git +scmurl https://github.com/seanchoi0519/SlicerQuickModelAlign.git scmrevision master # list dependencies @@ -11,17 +11,17 @@ depends NA build_subdirectory . # homepage -homepage https://github.com/seanchoi0519/SlicerQuickAlign.git +homepage https://github.com/seanchoi0519/SlicerQuickModelAlign.git # Firstname1 Lastname1 ([SubOrg1, ]Org1), Firstname2 Lastname2 ([SubOrg2, ]Org2) # For example: Jane Roe (Superware), John Doe (Lab1, Nowhere), Joe Bloggs (Noware) contributors Arthur Porto (LSU), Sara Rolfe (UW), Murat Maga (SCRI), Dr. Sean Choi (UQ) # Match category in the xml description of the module (where it shows up in Modules menu) -category Registration +category QuickModelAlign # url to icon (png, size 128x128 pixels) -iconurl https://raw.githubusercontent.com/seanchoi0519/SlicerQuickAlign/master/QuickAlign.png +iconurl https://raw.githubusercontent.com/seanchoi0519/SlicerQuickModelAlign/master/QuickModelAlign.png # Give people an idea what to expect from this code # - Is it just a test or something you stand behind? @@ -31,7 +31,7 @@ status Beta description QuickAlign allows a quick, simple alignment and comparison of two 3D models aided by ALPACA and custom display modes. # Space separated list of urls -screenshoturls https://raw.githubusercontent.com/seanchoi0519/SlicerQuickAlign/master/QuickAlign.png +screenshoturls https://raw.githubusercontent.com/seanchoi0519/SlicerQuickModelAlign/master/QuickModelAlign.png # 0 or 1: Define if the extension should be enabled after its installation.