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How the multiple PWM of a TF affect pagerank score #27

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swparkbi opened this issue Jun 22, 2022 · 2 comments
Open

How the multiple PWM of a TF affect pagerank score #27

swparkbi opened this issue Jun 22, 2022 · 2 comments

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@swparkbi
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Hi Kai,

First of all, thank you so much to provide this program continuously.
It is a great opportunity to utilize Taiji to find novel TF candidates for my work.

During I ran Taiji, I found a single TF has multiple PWM in the meme file from the cisBP database.
I just wonder whether the number of PWM per TF can affect Pagerank score.

Thanks a lot!

@kaizhang
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When there are multiple PWMs, the one that has the best matching score will be used.

@swparkbi
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How can I find which PWM is best matched?

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