Linux .jar corrupt file issue

[beatrixOngit]

Hi, I was able to execute the Mac GUI version of this tool but running the .jar file on Ubuntu causes an error [see below]:

I have a few more questions about G2P and would be very thankful if you could answer them:

1. Is there a way to include a recombination hotspot distribution?
2. Can you comment on the scalability of this method? For example, I would like to run on a 1.5Gigabase of genome size with an effective population size of at least 2000 individuals.
3. Is there a way to simulate using a given SNP distribution?

[XiaoleiLiuBio]

We tested the G2P Linux version on ubuntu18.04 and succeed. What is the ubuntu version on your server?
G2P is designed for efficient generate big data for evaluating the speed and Power/FDR performance of the GWAS method. I recommend you to use the simer package (https://github.com/xiaolei-lab/SIMER), which designed for accurate simulation of life science and breeding, and it can meet all of your simulation requirements.

[beatrixOngit]

I am using v18.04. Taking your suggestion, I tried to install Simer. Again, I could install locally but have issues with installation on the remote Ubuntu v18.04 server. I am attaching the error messages and a sessionInfo. I understand that Simer is not available for R3.5+ yet

sessionInfo.txt

[beatrixOngit]

Hi,
Wondering if you had a chance to look at this issue?