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DESCRIPTION
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Package: HLAClustRView
Type: Package
Title: HLA typing clustering and visualization based on specific similarity
metrics
Description: This package implements specialized similarity metrics that
quantify the similarity between HLA typing from multiple samples. Using
these metrics, the package enables hierarchical cluster analysis and can
bind RNA-seq expression (when available) to the clusters.
Version: 0.99.0
Date: 2018-11-09
Authors@R: c(person("Pascal", "Belleau", email="[email protected]",
role=c("cre", "aut"), comment = c(ORCID = "0000-0002-0802-1071")),
person("Adewunmi", "Adelaja", email="[email protected]",
role=c("aut")),
person("Astrid", "Deschênes", email="[email protected]",
role=c("aut"), comment = c(ORCID = "0000-0001-7846-6749")),
person("Santiago", "Medina", email="[email protected]",
role=c("aut")),
person("Nissim", "Ranade", email="[email protected]",
role=c("aut")),
person("Allissa", "Dillman", email="[email protected]",
role=c("aut")))
License: MIT + file LICENSE
Encoding: UTF-8
NeedsCompilation: no
VignetteBuilder: knitr
biocViews: BiologicalQuestion, Software, ImmunoOncology, Clustering,
MultipleComparison
Depends: R (>= 3.5.0)
Imports: purrr,
dplyr,
tidyr,
utils,
stringr,
data.table,
stats,
ComplexHeatmap,
graphics,
tibble,
ape,
rlang
Suggests: testthat,
knitr,
rmarkdown,
circlize,
BiocStyle
RoxygenNote: 6.1.1