[Python] pyfury0.9.0 installed from the source folder does not work properly #2035
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Hi @LouisLou2, are you using different Python for building and running putest? Could you check whether your pytest is installed in another pyenv？ |
Yes, I'm sure I'm using the pyfury_env2 environment for this build. It is also true that testing is done in this environment. (pyfury_env2) leo@leo-dev:~/projects/fury-0.9.0/python$ which pytest
/home/leo/Toolset/lang/anaconda/envs/pyfury_env2/bin/pytest
(pyfury_env2) leo@leo-dev:~/projects/fury-0.9.0/python$ which python
/home/leo/Toolset/lang/anaconda/envs/pyfury_env2/bin/python
(pyfury_env2) leo@leo-dev:~/projects/fury-0.9.0/python$ pytest -v -s .
============================= test session starts ==============================
platform linux -- Python 3.9.21, pytest-8.3.4, pluggy-1.5.0 -- /home/leo/Toolset/lang/anaconda/envs/pyfury_env2/bin/python
cachedir: .pytest_cache
rootdir: /home/leo/projects/fury-0.9.0/python
collected 0 items / 12 errors
==================================== ERRORS ====================================
_____________ ERROR collecting pyfury/format/tests/test_encoder.py _____________
... |
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Looks strange, this error message we're encountering, undefined symbol: PyGC_Disable, typically indicates a compatibility issue between a Python extension module nd the version of Python being used. Most of times this can happen if the module was compiled against a different Python version than the one we are running |
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Version
OS:
Ubuntu 24.04.1 LTSgcc
Anaconda Env:
name:
pyfury_env2version:
Python 3.9.21pip list:
(pyfury_env2) leo@leo-dev:~$ pip list Package Version Editable project location --------------- ----------- ------------------------------------ Bottleneck 1.4.2 cloudpickle 3.1.1 Cython 3.0.11 exceptiongroup 1.2.2 iniconfig 2.0.0 mkl_fft 1.3.11 mkl_random 1.2.8 mkl-service 2.4.0 mmh3 5.1.0 numexpr 2.10.1 numpy 1.26.4 packaging 24.2 pandas 2.2.3 pip 25.0 pluggy 1.5.0 pyarrow 14.0.0 pyfury 0.9.0 /home/leo/projects/fury-0.9.0/python pytest 8.3.4 python-dateutil 2.9.0.post0 pytz 2024.1 setuptools 75.8.0 six 1.16.0 tomli 2.2.1 tzdata 2023.3 wheel 0.45.1structure of
/home/leo/projects/fury-0.9.0/python(pyfury_env2) leo@leo-dev:~$ tree /home/leo/projects/fury-0.9.0/python /home/leo/projects/fury-0.9.0/python ├── pyfury │ ├── buffer.py │ ├── codegen.py │ ├── error.py │ ├── format │ │ ├── encoder.pxi │ │ ├── encoder.py │ │ ├── _format.pyx │ │ ├── _format.so │ │ ├── infer.py │ │ ├── __init__.py │ │ ├── row.pxi │ │ ├── serializer.py │ │ ├── tests │ │ │ ├── __init__.py │ │ │ ├── test_encoder.py │ │ │ ├── test_infer.py │ │ │ └── test_vectorized.py │ │ └── vectorized.pxi │ ├── _fury.py │ ├── includes │ │ ├── __init__.pxd │ │ ├── libabsl.pxd │ │ ├── libformat.pxd │ │ └── libutil.pxd │ ├── __init__.pxd │ ├── __init__.py │ ├── lib │ │ ├── collection.py │ │ ├── __init__.pxd │ │ ├── __init__.py │ │ ├── mmh3 │ │ │ ├── __init__.pxd │ │ │ ├── __init__.py │ │ │ ├── mmh3.pxd │ │ │ ├── mmh3.pyx │ │ │ ├── mmh3.so │ │ │ └── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ ├── __init__.cpython-38.pyc │ │ │ └── __init__.cpython-39.pyc │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ ├── __init__.cpython-38.pyc │ │ │ └── __init__.cpython-39.pyc │ │ └── tests │ │ ├── __init__.py │ │ ├── test_collection.py │ │ └── test_mmh3.py │ ├── meta │ │ ├── __init__.py │ │ └── metastring.py │ ├── __pycache__ │ │ ├── __init__.cpython-311.pyc │ │ ├── __init__.cpython-38.pyc │ │ └── __init__.cpython-39.pyc │ ├── resolver.py │ ├── _serialization.pyx │ ├── _serialization.so │ ├── _serializer.py │ ├── serializer.py │ ├── _struct.py │ ├── tests │ │ ├── benchmark.py │ │ ├── core.py │ │ ├── __init__.py │ │ ├── profiling.py │ │ ├── record.py │ │ ├── test_buffer.py │ │ ├── test_codegen.py │ │ ├── test_cross_language.py │ │ ├── test_metastring.py │ │ ├── test_serializer.py │ │ ├── test_struct.py │ │ └── test_type.py │ ├── type.py │ ├── _util.pxd │ ├── util.py │ ├── _util.pyx │ └── _util.so ├── pyfury.egg-info │ ├── dependency_links.txt │ ├── not-zip-safe │ ├── PKG-INFO │ ├── requires.txt │ ├── SOURCES.txt │ └── top_level.txt ├── README.md └── setup.py 14 directories, 76 filesComponent(s)
Python
Minimal reproduce step
No errors were encountered in the above steps
Trying to run the testing section gives a compilation error
pytest -v -s .What did you expect to see?
I expect to see test cases that should execute correctly, or at least need to be runnable
What did you see instead?
Anything Else?
No response
Are you willing to submit a PR?
The text was updated successfully, but these errors were encountered: