Error loading PyMNE

[geigermartin]

When I try this:

] add PyMNE
] add CondaPkg
> using CondaPkg
> CondaPkg.add("pandas")
> using PyMNE

I get this error:

ERROR: InitError: Python: ModuleNotFoundError: No module named 'numpy'
Python stacktrace:
 [1] <module>
   @ /tmp/jl_wh31xE/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/mne/utils/check.py:17
 [2] _parse_verbose
   @ mne.utils._logging /tmp/jl_wh31xE/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/mne/utils/_logging.py:225
 [3] set_log_level
   @ mne.utils._logging /tmp/jl_wh31xE/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/mne/utils/_logging.py:210
 [4] <module>
   @ /tmp/jl_wh31xE/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/mne/__init__.py:35
Stacktrace:
  [1] pythrow()
    @ PythonCall.Core ~/.julia/packages/PythonCall/L4cjh/src/Core/err.jl:92
  [2] errcheck
    @ ~/.julia/packages/PythonCall/L4cjh/src/Core/err.jl:10 [inlined]
  [3] pyimport(m::String)
    @ PythonCall.Core ~/.julia/packages/PythonCall/L4cjh/src/Core/builtins.jl:1561
  [4] __init__()
    @ PyMNE ~/.julia/packages/PyMNE/cNGDN/src/PyMNE.jl:20
  [5] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1378
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1366
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{…}, ignore_native::Nothing; register::Bool)
    @ Base ./loading.jl:1254
  [8] _include_from_serialized (repeats 2 times)
    @ ./loading.jl:1210 [inlined]
  [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{…}, DEPOT_PATH::Vector{…})
    @ Base ./loading.jl:2057
 [10] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2527
 [11] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2388
 [12] #invoke_in_world#3
    @ ./essentials.jl:1089 [inlined]
 [13] invoke_in_world
    @ ./essentials.jl:1086 [inlined]
 [14] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2375
 [15] macro expansion
    @ ./loading.jl:2314 [inlined]
 [16] macro expansion
    @ ./lock.jl:273 [inlined]
 [17] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2271
 [18] #invoke_in_world#3
    @ ./essentials.jl:1089 [inlined]
 [19] invoke_in_world
    @ ./essentials.jl:1086 [inlined]
 [20] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2260
during initialization of module PyMNE

[behinger]

one clarificiation, if you then do CondaPkg.add("mne") - then it works. It seems CondaPkg for some reason activates the wrong environment when loaded extra

[palday]

I think this is fixed in the latest release, which changed the resolution path for the installation of mne and its dependents. I'm closing this under that assumption, but if it's still broken, feel free to re-open!