Merge pull request #825 from padix-key/issue-824 #1039
padix-keytest_and_deploy.yml
on: push
Build CCD and wheel for reusing it in several CI jobs
10m 52s
Check code style
17s
Generate wheels matrix
12s
Build source distribution
27s
Test interfaces to databases and applications
4m 15s
Test interface to Muscle 5
59s
Build documentation
4m 44s
Matrix: Build & Test
Upload documentation to GitHub Releases and documentation website
0s
Upload package to GitHub Releases & PyPI
13s
Annotations
13 warnings and 9 notices
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Test interface to Muscle 5
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test interfaces to databases and applications
warning libmamba You are using 'pip' as an additional package manager.
Be aware that packages installed with 'pip' are managed independently from 'conda-forge' channel.
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Test interfaces to databases and applications
warning libmamba [dssp-4.5.5-py312h664ff3f_0] The following files were already present in the environment:
- share/libcifpp/mmcif_ddl.dic
- share/libcifpp/mmcif_ma.dic
- share/libcifpp/mmcif_pdbx.dic
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Test interfaces to databases and applications
warning libmamba [libuuid-2.38.1-h0b41bf4_0] The following files were already present in the environment:
- lib/libuuid.a
- lib/libuuid.so
- lib/pkgconfig/uuid.pc
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Test interfaces to databases and applications
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
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Test interfaces to databases and applications
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test interfaces to databases and applications
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Build documentation
warning libmamba You are using 'pip' as an additional package manager.
Be aware that packages installed with 'pip' are managed independently from 'conda-forge' channel.
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Build documentation
warning libmamba [dssp-4.5.5-py312h664ff3f_0] The following files were already present in the environment:
- share/libcifpp/mmcif_ddl.dic
- share/libcifpp/mmcif_ma.dic
- share/libcifpp/mmcif_pdbx.dic
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Build documentation
warning libmamba [libuuid-2.38.1-h0b41bf4_0] The following files were already present in the environment:
- lib/libuuid.a
- lib/libuuid.so
- lib/pkgconfig/uuid.pc
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Build documentation
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
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Build documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Build documentation
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Build & Test (cp312-macosx_arm64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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Build & Test (cp313-macosx_arm64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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Build & Test (cp311-macosx_arm64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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Build & Test (cp312-win_amd64, windows-latest)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677
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Build & Test (cp311-win_amd64, windows-latest)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677
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Build & Test (cp313-win_amd64, windows-latest)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677
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Build & Test (cp312-macosx_x86_64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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Build & Test (cp311-macosx_x86_64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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Build & Test (cp313-macosx_x86_64, macos-latest)
The macos-latest label will migrate to macOS 15 beginning August 4, 2025. For more information see https://github.com/actions/runner-images/issues/12520
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