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Merge pull request #833 from padix-key/issue-831 #1056

Merge pull request #833 from padix-key/issue-831

Merge pull request #833 from padix-key/issue-831 #1056

Triggered via push October 8, 2025 13:19
Status Failure
Total duration 34m 25s
Artifacts 16
Build CCD and wheel for reusing it in several CI jobs
10m 57s
Build CCD and wheel for reusing it in several CI jobs
Check code style
16s
Check code style
Generate wheels matrix
12s
Generate wheels matrix
Build source distribution
37s
Build source distribution
Test interfaces to databases and applications
8m 51s
Test interfaces to databases and applications
Test interface to Muscle 5
1m 5s
Test interface to Muscle 5
Build documentation
5m 5s
Build documentation
Run benchmarks
10m 21s
Run benchmarks
Upload CCD to GitHub Releases
8s
Upload CCD to GitHub Releases
Matrix: Build & Test
Upload documentation to GitHub Releases and documentation website
0s
Upload documentation to GitHub Releases and documentation website
Upload package to GitHub Releases & PyPI
0s
Upload package to GitHub Releases & PyPI
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Annotations

1 error and 13 warnings
Test interfaces to databases and applications
Process completed with exit code 1.
Test interface to Muscle 5
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
Build documentation
warning libmamba You are using 'pip' as an additional package manager. Be aware that packages installed with 'pip' are managed independently from 'conda-forge' channel.
Build documentation
warning libmamba [dssp-4.5.6-py312h36e4239_2] The following files were already present in the environment: - share/libcifpp/mmcif_ddl.dic - share/libcifpp/mmcif_ma.dic - share/libcifpp/mmcif_pdbx.dic
Build documentation
warning libmamba [ossuuid-1.6.2-h5888daf_1001] The following files were already present in the environment: - lib/libuuid.a - lib/libuuid.so - lib/pkgconfig/uuid.pc
Build documentation
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used. warning libmamba Please make sure you understand Anaconda Terms of Services. warning libmamba See: https://legal.anaconda.com/policies/en/
Build documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
Build documentation
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
Test interfaces to databases and applications
warning libmamba You are using 'pip' as an additional package manager. Be aware that packages installed with 'pip' are managed independently from 'conda-forge' channel.
Test interfaces to databases and applications
warning libmamba [dssp-4.5.6-py312h36e4239_2] The following files were already present in the environment: - share/libcifpp/mmcif_ddl.dic - share/libcifpp/mmcif_ma.dic - share/libcifpp/mmcif_pdbx.dic
Test interfaces to databases and applications
warning libmamba [ossuuid-1.6.2-h5888daf_1001] The following files were already present in the environment: - lib/libuuid.a - lib/libuuid.so - lib/pkgconfig/uuid.pc
Test interfaces to databases and applications
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used. warning libmamba Please make sure you understand Anaconda Terms of Services. warning libmamba See: https://legal.anaconda.com/policies/en/
Test interfaces to databases and applications
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
Test interfaces to databases and applications
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(

Artifacts

Produced during runtime
Name Size Digest
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53.3 MB
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release-cp311-macosx_arm64 Expired
39 MB
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release-cp311-macosx_x86_64 Expired
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release-cp312-win_amd64 Expired
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release-cp313-macosx_arm64 Expired
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release-cp313-macosx_x86_64 Expired
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release-cp313-manylinux_x86_64 Expired
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release-cp313-win_amd64 Expired
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release-sdist Expired
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