Add type annotations to code base #1245

Job	Run time
Generate wheels matrix	11s
Check code style	25s
Build CCD and wheel for reusing it in several CI jobs	4m 3s
Build documentation	4m 34s
Test interface to Muscle 5	41s
Test interfaces to databases and applications	46s
Build source distribution	32s
Run benchmarks	15m 51s
Upload CCD to GitHub Releases	4s
Build & Test (cp313-manylinux_aarch64, ubuntu-24.04-arm)	2m 31s
Build & Test (cp312-manylinux_x86_64, ubuntu-latest)	2m 35s
Build & Test (cp313-manylinux_x86_64, ubuntu-latest)	2m 34s
Build & Test (cp314-macosx_arm64, macos-latest)	2m 35s
Build & Test (cp314-manylinux_x86_64, ubuntu-latest)	2m 34s
Build & Test (cp314-manylinux_aarch64, ubuntu-24.04-arm)	2m 32s
Build & Test (cp312-manylinux_aarch64, ubuntu-24.04-arm)	2m 31s
Build & Test (cp312-win_amd64, windows-latest)	2m 28s
Build & Test (cp313-macosx_arm64, macos-latest)	2m 34s
Build & Test (cp313-win_amd64, windows-latest)	2m 24s
Build & Test (cp312-macosx_arm64, macos-latest)	2m 17s
Build & Test (cp314-win_amd64, windows-latest)	2m 28s
Upload package to GitHub Releases & PyPI	0s
Upload documentation to GitHub Releases and documentation website	0s
	57m 10s

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