with cov #46
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| name: Run tests of python package | |
| on: | |
| push: | |
| branches: | |
| - '**' | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| run-tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.3.2' | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install -r requirements_dev.txt | |
| - name: Test with pytest | |
| run: | | |
| python -m pytest --cov=causalAssembly tests/ |