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[Clinical Trials] Refactor indexing #20

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michelole opened this issue Jul 17, 2018 · 0 comments
Closed

[Clinical Trials] Refactor indexing #20

michelole opened this issue Jul 17, 2018 · 0 comments
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@michelole
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After new fields have been introduced on #15, indexing clinical trials is more resource-demanding.

Refactor it so that it does not consume lots of RAM neither stress GC.

Consider using ES BulkProcessor (bst-mug/trec-2017-precision-medicine#105).
@michelole michelole self-assigned this Jul 17, 2018
arianesasso pushed a commit to hpi-dhc/trec-pm that referenced this issue Nov 15, 2018
@michelole
Lazy build a ClinicalTrial object (fixes bst-mug#20)
853a225 
This reduces memory consumption by not trying to keep all clinical trials in memory.
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