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Build (client) with spack on CentOS7 #252

@cessenat

Description

@cessenat

I try to build sanzu for CentOS7 as a simple user with no sudo privilege.
I use a decent gcc compiler (8.4).
I obviously have missed a pre-requisite about "libclang":
it fails as follows:
<<
$ spack install sanzu %gcc ^[email protected]

==> Warning: the original concretizer is currently being used.
Upgrade to "clingo" at your earliest convenience. The original concretizer will be removed from Spack in a future version.
==> [email protected] : has external module in ['zlib/1.2.11-gcc-8.40.']
[+] /opt/spack/sw/zlib/1.2.11/linux-centos7-x86_64/gcc-8.4.0/zlib-1.2.11 (external zlib-1.2.11-cwiymq6mjpyhygikdliec3qxmtxlm4lb)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/nghttp2-1.57.0-cva6ty2fky2g4tmgcqu3ukybqjbsx576
==> [email protected] : has external module in ['xz/5.2.5-gcc-8.4.0']
[+] /opt/spack/sw/xz/5.2.5/linux-centos7-x86_64/gcc-8.4.0/xz-5.2.5 (external xz-5.2.5-wc3eqwosyydmpsqlmhtbpxwonwdeiey5)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/pcre-8.45-m4eldcmbe5iqe37q4y4olu23d6krpfkx
==> [email protected] : has external module in ['python/3.7.7-gcc-8.4.0']
[+] /opt/spack/sw/python/3.7.7/linux-centos7-x86_64/gcc-8.4.0/python-3.7.7 (external python-3.7.7-dwllrk7xmwdbfgv6hbkjyoyumaugfhp3)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/nasm-2.15.05-jqlbv2twn2e2p6ryrvjjjgq5txtr4cgj
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/alsa-lib-1.2.3.2-katdvi7l3eta6dfjvv6sx6xtrglwkg42
==> [email protected] : has external module in ['libiconv/1.16-gcc-8.4.0']
[+] /opt/spack/sw/libiconv/1.16/linux-centos7-x86_64/gcc-8.4.0/libiconv-1.16 (external libiconv-1.16-fsjhth7mutjoce4pu6krbwtk7xhzcoe3)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/yasm-1.3.0-cdvmbgfdwryshel3x3nfxnrq4vk6be72
==> [email protected] : has external module in ['bzip2/1.0.8-gcc-8.4.0']
[+] /opt/spack/sw/bzip2/1.0.8/linux-centos7-x86_64/gcc-8.4.0/bzip2-1.0.8 (external bzip2-1.0.8-vjdycwwzhddrfy266d33k5dn6p5bl26k)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/abseil-cpp-20230802.1-lbmyhfkafn5bxa3cjsoc35frh5iln3vt
==> [email protected] : has external module in ['gettext/0.20.2-gcc-8.4.0']
[+] /opt/spack/sw/gettext/0.20.2/linux-centos7-x86_64/gcc-8.4.0/gettext-0.20.2 (external gettext-0.20.2-gx2hj2atwtkjuli2jbwr52r4ao4g2xeu)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libpthread-stubs-0.4-repcre6qaz6tkwb3vtmekxdaofdaeky2
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/xproto-7.0.31-iu5peokr2tdobrsiclwkqnggnhikfxji
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libmd-1.0.4-zonmbnzief33ysjdcu4wqhivosidoh4a
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/xextproto-7.3.0-fewdu6x5zpks5mfvzacg6v34fmjaht7v
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/xtrans-1.4.0-pokzccma52ebxf7mofvebatszahtrkl3
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/kbproto-1.0.7-kydfma3alvdl6afl4pdqtvto67dfd42w
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/inputproto-2.3.2-7io5edoxjw5x5ly526aiycyxwwvq2qco
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/fixesproto-5.0-n5tgvbjjuvao5n44saapaqmuwahx3ehi
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/recordproto-1.14.2-t5fnfaeoyukpyfmswkvmk3eae4235zu6
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/damageproto-1.2.1-v23teqhe2fl7nswbmklnft4gvjsgtiy4
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libogg-1.3.5-kgam2h7eo76rceegzaqfkwgo53xanatk
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/linux-pam-1.5.2-zcovtuzs6hyv6i3q6gkoc23rjhdnuddw
==> [email protected] : has external module in ['pkgconf/1.7.3-gcc-8.4.0']
[+] /opt/spack/sw/pkgconf/1.7.3/linux-centos7-x86_64/gcc-8.4.0/pkgconf-1.7.3 (external pkgconf-1.7.3-vpcjgjlcpiqwx7rsba3bgt6voibugpeq)
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libgssglue-0.4-t6uljxiuc36imfrcesnd2my5q5ixc3wn
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/openssl-3.1.3-mgw6lgq7e6dziwqrf7exs7fxrcqp4mxv
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/xcb-proto-1.15.2-j2uw4wf7azqjkrslm6ohnqjheb3ucrxg
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/x264-20210613-twe5qdgu3lco3e5tkw7rbz2s2ntpswzl
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/protobuf-3.25.1-cgn5kuhwzgrt2zb7i3b23qtjub2xp3xv
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libbsd-0.11.7-sxuikdsnez6powqkkwavtbo45a5alpah
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libpam-1.09-llqvmnalwar43m3yj3ymdprq5gyhxzs5
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libvorbis-1.3.7-ya2mtiuetgnifgz36rxkegq4unzgh4d5
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxau-1.0.8-s4wuz5xv2iiv46ueoow4cj3sq4utzudg
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libssh2-1.11.0-tnw2mishj2iykatacbxyw6q4od7penzh
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/curl-8.4.0-snsedkl3onnlejasvgabirlwq7xlun74
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/krb5-1.20.1-krsaghkklgtilnhmfyqed3cxpcxyljtr
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/ffmpeg-6.0-7q3jrbhoznhprbvkwh5nmjf677wjbnso
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxdmcp-1.1.4-lvqcxdwrdtx3elpfvnthrnnrttgffds5
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/opus-1.3.1-ecay2mrcwbzarauewjl4p3xtrf6eekpd
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libgit2-1.7.0-4x4ymzyvkxcrywgsuksuxdn62nhuxten
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxcb-1.14-vrie3dkhpsltnw2rviumx6nql476ggty
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/rust-1.73.0-aktutbu667qo3xg2sg5gggyezrjy65gn
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libx11-1.8.4-idfsgo6se3r2eprktnqtovkswjvzqcn5
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxfixes-5.0.2-2j5rm4gqg7bil53et5qicqzy2axdhdo6
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxext-1.3.3-w7gkfbnee6ehixtsxfg63nkeuen2nlkd
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxdamage-1.1.4-o7plzulmroon7j37dwtvkuhdpunx636g
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxi-1.7.6-vrxjv7uc5kg7nm6qqdug6b5dmxgv37jo
[+] /home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/libxtst-1.2.2-t4xsv3jkeqaubcolcb273yled2437i6w
==> Installing sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv [50/50]
==> No binary for sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv found: installing from source
==> Using cached archive: /home/cessenat/spack/var/spack/cache/_source-cache/archive/3e/3ef19ac56d0b09fe6097f721fe206565665142cd9d5cc744092838daf63b4f90.tar.gz
==> No patches needed for sanzu
==> sanzu: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 101:
'/home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/rust-1.73.0-aktutbu667qo3xg2sg5gggyezrjy65gn/bin/cargo' 'install' '--root' '/home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv' '--path' 'sanzu'

3 errors found in build log:
136 Compiling x11rb-protocol v0.10.0
137 Compiling crossbeam-deque v0.8.4
138 Compiling nix v0.25.1
139 Compiling users v0.10.0
140 Compiling humantime v2.1.0
141 Compiling base64 v0.21.5

142 error: failed to run custom build command for libgssapi-sys v0.3.0
143
144 Caused by:
145 process didn't exit successfully: /home/cessenat/tmp/spack-stage-sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv/spack-src/target/release/build/libgssapi- sys-db3d66ef8d25d5ba/build-script-build (exit status: 101)
146 --- stdout
147 cargo:rustc-link-lib=gssapi_krb5
148

 ...

 156              ),
 157              stdout: "/home/cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/krb5-1.20.1-krsaghkklgtilnhmfyqed3cxpcxyljtr/lib/libgssapi_krb5.so.2.2\n/home/
        cessenat/opt/spack/linux-centos7-skylake/gcc-8.4.0/krb5-1.20.1-krsaghkklgtilnhmfyqed3cxpcxyljtr/lib/libgssapi_krb5.so.2\n/home/cessenat/opt/spack/linux-ce
        ntos7-skylake/gcc-8.4.0/krb5-1.20.1-krsaghkklgtilnhmfyqed3cxpcxyljtr/lib/libgssapi_krb5.so\n",
 158              stderr: "",
 159          },
 160      )
 161      thread 'main' panicked at /home/cessenat/.cargo/registry/src/index.crates.io-6f17d22bba15001f/bindgen-0.64.0/./lib.rs:2393:31:

162 Unable to find libclang: "the libclang shared library at /usr/lib64/clang-private/libclang.so.7 could not be opened: libclangAST.so.7: cannot open share
d object file: No such file or directory"
163 note: run with RUST_BACKTRACE=1 environment variable to display a backtrace
164 warning: build failed, waiting for other jobs to finish...
165 error: failed to compile sanzu v0.1.4 (/home/cessenat/tmp/spack-stage-sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv/spack-src/sanzu), intermediate artifa
cts can be found at /home/cessenat/tmp/spack-stage-sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv/spack-src/target.
166 To reuse those artifacts with a future compilation, set the environment variable CARGO_TARGET_DIR to that path.

See build log for details:
/home/cessenat/tmp/spack-stage-sanzu-0.1.4-uyq3q7yt3lixvhkzg3qtsncwvjbt5cuv/spack-build-out.txt

despite I do have a "/usr/lib64/clang-private/libclangAST.so.7" !

I join the spack package.
package.py.gz

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