initial commit

Author: joshua-gould

Diff for: .eslintrc.js

@@ -0,0 +1,32 @@
+module.exports = {
+	"env" : {
+		"browser" : true,
+		"jquery" : true,
+		"es6" : true,
+		"worker" : true
+	},
+	"extends" : "eslint:recommended",
+	"rules" : {
+		"indent" : [ "error", "tab" ],
+		"linebreak-style" : [ "error", "unix" ],
+		"quotes" : [ "error", "single" ],
+		"semi" : [ "error", "always" ],
+		"no-redeclare" : 0,
+		"no-console" : 0
+	},
+	"globals" : {
+		"morpheus" : true,
+		"_" : true,
+		"d3" : true,
+		"Plotly" : true,
+		"colorbrewer" : true,
+		"Hammer" : true,
+		"XLSX" : true,
+		"canvg" : true,
+		"Clipboard" : true,
+		"Newick" : true,
+		"saveAs" : true,
+		"Slick" : true,
+		"C2S" : true
+	}
+};

Diff for: .gitignore

@@ -0,0 +1,7 @@
+node_modules
+.project
+.settings
+morpheus_3rd_party.xlsx
+js/morpheus-external.js
+js/morpheus-external.min.js
+js/morpheus.js

Diff for: Gruntfile.js

@@ -0,0 +1,93 @@
+/*global module:false*/
+module.exports = function(grunt) {
+	grunt
+			.initConfig({
+				pkg : grunt.file.readJSON('package.json'),
+				meta : {
+					banner : '/*! <%= pkg.title || pkg.name %> - v<%= pkg.version %> - '
+							+ '<%= grunt.template.today("yyyy-mm-dd") %>\n'
+							+ '<%= pkg.homepage ? "* " + pkg.homepage + "\n" : "" %>'
+							+ '* Copyright (c) <%= grunt.template.today("yyyy") %> <%= pkg.author.name %>; %> */'
+				},
+				uglify : {
+					morpheus : {
+						options : {
+							mangle : false,
+							preserveComments : false
+						},
+						files : {
+							'js/morpheus-latest.min.js' : [ 'js/morpheus.js' ]
+						}
+					},
+					extJs : {
+						options : {
+							mangle : false,
+							preserveComments : false
+						},
+						files : {
+							'js/morpheus-external.min.js' : [ 'js/morpheus-external.js' ]
+						}
+					}
+				},
+				cssmin : {
+					css : {
+						src : 'css/morpheus.all.css',
+						dest : 'css/morpheus-latest.min.css'
+					}
+				},
+				concat : {
+					css : {
+						src : [ 'css/bootstrap.min.css',
+								'css/bootstrap-select.min.css',
+								'css/jquery-ui.min.css',
+								'css/font-awesome.min.css',
+								'css/hopscotch.min.css', 'css/slick.grid.css',
+								'css/animate.css', 'css/morpheus.css' ],
+						dest : 'css/morpheus.all.css'
+					},
+					extJsAll : {
+						src : [ 'js/morpheus-external.min.js',
+								'js/plotly-latest.min.js' ],
+						dest : 'js/morpheus-external-latest.min.js'
+					},
+					extJs : {
+						nonull : true,
+						dest : 'js/morpheus-external.js',
+						src : [ 'js/d3.min.js', 'js/jquery-1.11.1.min.js',
+								'js/bootstrap.min.js', 'js/underscore-min.js',
+								'js/newick.js', 'js/hammer.min.js',
+								'js/jquery.mousewheel.min.js',
+								'js/bootstrap-select.min.js',
+								'js/xlsx.full.min.js', 'js/canvas2svg.js',
+								'js/canvg.js', 'js/rgbcolor.js',
+								'js/jquery-ui.min.js', 'js/parser.js',
+								'js/FileSaver.min.js', 'js/Blob.js',
+								'js/canvas-toBlob.js', 'js/colorbrewer.js',
+								'js/hopscotch.min.js', 'js/typed.min.js',
+								'js/jquery.event.drag-2.2.js',
+								'js/clipboard.min.js', 'js/slick.min.js',
+								'js/js.cookie.js', 'js/d3.layout.cloud.js' ]
+					},
+					morpheus : {
+						nonull : true,
+						dest : 'js/morpheus.js',
+						src : [ 'src/util/util.js', 'src/util/*.js',
+								'src/io/*.js', 'src/matrix/vector_adapter.js',
+								'src/matrix/*.js', 'src/*.js',
+								'src/tools/*.js', 'src/ui/list.js',
+								'src/ui/*.js', 'src/**/*.js' ]
+					}
+				},
+				watch : {
+					files : [ 'src/*.js', 'src/**/*.js' ],
+					tasks : [ 'concat:morpheus' ]
+				}
+			});
+	grunt.registerTask('default', 'watch');
+	grunt.loadNpmTasks('grunt-contrib-watch');
+	grunt.loadNpmTasks('grunt-contrib-concat');
+	grunt.loadNpmTasks('grunt-contrib-uglify');
+	grunt.loadNpmTasks('grunt-contrib-copy');
+	grunt.loadNpmTasks('grunt-contrib-cssmin');
+	grunt.loadNpmTasks('grunt-contrib-jshint');
+};