From 4c65bdfd0234fd36d388907bfbfaf660bd1f2c42 Mon Sep 17 00:00:00 2001 From: Jelle Zijlstra Date: Sun, 20 Feb 2022 18:34:23 -0800 Subject: [PATCH] Fix a few help texts The continued strings on a separate line just get ignored by the runtime. You need to put them in parentheses to turn them into a single string. --- cwltool/argparser.py | 16 ++++++++++------ 1 file changed, 10 insertions(+), 6 deletions(-) diff --git a/cwltool/argparser.py b/cwltool/argparser.py index b4e68b1c9..d634cea37 100644 --- a/cwltool/argparser.py +++ b/cwltool/argparser.py @@ -478,14 +478,18 @@ def arg_parser() -> argparse.ArgumentParser: conda_dependencies = argparse.SUPPRESS if SOFTWARE_REQUIREMENTS_ENABLED: - dependency_resolvers_configuration_help = "Dependency resolver " - "configuration file describing how to adapt 'SoftwareRequirement' " - "packages to current system." + dependency_resolvers_configuration_help = ( + "Dependency resolver " + "configuration file describing how to adapt 'SoftwareRequirement' " + "packages to current system." + ) dependencies_directory_help = ( - "Defaut root directory used by dependency resolvers configuration." + "Default root directory used by dependency resolvers configuration." + ) + use_biocontainers_help = ( + "Use biocontainers for tools without an " + "explicitly annotated Docker container." ) - use_biocontainers_help = "Use biocontainers for tools without an " - "explicitly annotated Docker container." conda_dependencies = ( "Short cut to use Conda to resolve 'SoftwareRequirement' packages." )