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BM_mut.csv
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"Hugo_Symbol" "Chromosome" "Start_Position" "End_Position" "Reference_Allele" "Tumor_Seq_Allele2" "Variant_Classification" "Variant_Type" "Tumor_Sample_Barcode" "Entrez_Gene_Id" "NCBI_Build" "Strand" "dbSNP_RS" "dbSNP_Val_Status" "Genome_Change" "Annotation_Transcript" "cDNA_Change" "Codon_Change"
"HIST1H1C" "6" 26056112 26056112 "G" "T" "Missense_Mutation" "SNP" "DU-145" 3006 37 "+" NA NA "g.chr6:26056112G>T" "ENST00000343677.2" "c.545C>A" "c.(544-546)cCc>cAc"
"HIST1H1C" "6" 26056396 26056396 "C" "G" "Silent" "SNP" "DU-145" 3006 37 "+" NA NA "g.chr6:26056396C>G" "ENST00000343677.2" "c.261G>C" "c.(259-261)ctG>ctC"
"HIST1H2BD" "6" 26158513 26158513 "C" "A" "Nonsense_Mutation" "SNP" "DU-145" 3017 37 "+" NA NA "g.chr6:26158513C>A" "ENST00000289316.2" "c.116C>A" "c.(115-117)tCa>tAa"
"HIST1H2BD" "6" 26158540 26158540 "A" "G" "Missense_Mutation" "SNP" "HCT-116" 3017 37 "+" NA NA "g.chr6:26158540A>G" "ENST00000289316.2" "c.143A>G" "c.(142-144)cAg>cGg"
"TYMS" "18" 657839 657839 "T" "C" "Missense_Mutation" "SNP" "HCT-116" 7298 37 "+" NA NA "g.chr18:657839T>C" "ENST00000323274.10" "c.97T>C" "c.(97-99)Tac>Cac"
"SLC17A7" "19" 49933906 49933906 "C" "T" "Missense_Mutation" "SNP" "HCT-116" 57030 37 "+" NA NA "g.chr19:49933906C>T" "ENST00000221485.3" "c.1553G>A" "c.(1552-1554)gGc>gAc"
"ASMTL" "X" 1531651 1531651 "C" "T" "Missense_Mutation" "SNP" "HCT-116" 8623 37 "+" NA NA "g.chrX:1531651C>T" "ENST00000381317.3" "c.1619G>A" "c.(1618-1620)aGc>aAc"
"RGL1" "1" 183816708 183816708 "G" "A" "Silent" "SNP" "HCT-15" 23179 37 "+" NA NA "g.chr1:183816708G>A" "ENST00000360851.3" "c.147G>A" "c.(145-147)ggG>ggA"
"RGL1" "1" 183876205 183876205 "C" "A" "Missense_Mutation" "SNP" "HCT-15" 23179 37 "+" NA NA "g.chr1:183876205C>A" "ENST00000360851.3" "c.1532C>A" "c.(1531-1533)cCt>cAt"
"ADI1" "2" 3523169 3523169 "C" "T" "Silent" "SNP" "HCT-15" 55256 37 "+" NA NA "g.chr2:3523169C>T" "ENST00000327435.6" "c.90G>A" "c.(88-90)caG>caA"
"NEU1" "6" 31829206 31829206 "G" "A" "Missense_Mutation" "SNP" "HCT-15" 4758 37 "+" NA NA "g.chr6:31829206G>A" "ENST00000375631.4" "c.374C>T" "c.(373-375)gCg>gTg"
"SERPINH1" "11" 75277887 75277887 "G" "A" "Missense_Mutation" "SNP" "HCT-15" 871 37 "+" NA NA "g.chr11:75277887G>A" "ENST00000524558.1" "c.493G>A" "c.(493-495)Gac>Aac"
"SERPINH1" "11" 75277938 75277938 "G" "A" "Missense_Mutation" "SNP" "HCT-15" 871 37 "+" NA NA "g.chr11:75277938G>A" "ENST00000524558.1" "c.544G>A" "c.(544-546)Gac>Aac"
"CRISPLD2" "16" 84911042 84911042 "A" "G" "Splice_Site" "SNP" "HCT-15" 83716 37 "+" NA NA "g.chr16:84911042A>G" "ENST00000262424.5" "" "c.e12-1"
"ASMTL" "X" 1546747 1546747 "C" "T" "Silent" "SNP" "HT29" 8623 37 "+" NA NA "g.chrX:1546747C>T" "ENST00000381317.3" "c.777G>A" "c.(775-777)aaG>aaA"
"HIST1H1C" "6" 26056117 26056117 "C" "T" "Silent" "SNP" "PC-3" 3006 37 "+" NA NA "g.chr6:26056117C>T" "ENST00000343677.2" "c.540G>A" "c.(538-540)gcG>gcA"
"NSMAF" "8" 59547752 59547752 "C" "G" "Missense_Mutation" "SNP" "PC-3" 8439 37 "+" NA NA "g.chr8:59547752C>G" "ENST00000038176.3" "c.329G>C" "c.(328-330)aGt>aCt"
"DHRS2" "14" 24108527 24108527 "G" "T" "Missense_Mutation" "SNP" "PC-3" 10202 37 "+" NA NA "g.chr14:24108527G>T" "ENST00000250383.6" "c.280G>T" "c.(280-282)Gtg>Ttg"
"ADI1" "2" 3523254 3523254 "A" "G" "Missense_Mutation" "SNP" "SK-OV-3" 55256 37 "+" NA NA "g.chr2:3523254A>G" "ENST00000327435.6" "c.5T>C" "c.(4-6)gTg>gCg"
"ASMTL" "X" 1544422 1544422 "C" "T" "Silent" "SNP" "SK-OV-3" 8623 37 "+" NA NA "g.chrX:1544422C>T" "ENST00000381317.3" "c.1056G>A" "c.(1054-1056)gaG>gaA"
"SLC17A7" "19" 49937052 49937052 "G" "T" "Silent" "SNP" "UACC-257" 57030 37 "+" NA NA "g.chr19:49937052G>T" "ENST00000221485.3" "c.798C>A" "c.(796-798)atC>atA"
"AQP3" "9" 33442370 33442370 "G" "A" "Silent" "SNP" "IGR-OV1" 360 37 "+" NA NA "g.chr9:33442370G>A" "ENST00000297991.4" "c.639C>T" "c.(637-639)gcC>gcT"
"ABAT" "16" 8866661 8866661 "C" "T" "Missense_Mutation" "SNP" "IGR-OV1" 18 37 "+" NA NA "g.chr16:8866661C>T" "ENST00000396600.2" "c.841C>T" "c.(841-843)Cgg>Tgg"
"TNFSF9" "19" 6534945 6534945 "C" "T" "Silent" "SNP" "IGR-OV1" 8744 37 "+" NA NA "g.chr19:6534945C>T" "ENST00000245817.3" "c.633C>T" "c.(631-633)cgC>cgT"
"HIST1H1C" "6" 26056587 26056587 "C" "T" "Missense_Mutation" "SNP" "KM12" 3006 37 "+" NA NA "g.chr6:26056587C>T" "ENST00000343677.2" "c.70G>A" "c.(70-72)Gcg>Acg"
"CRISPLD2" "16" 84883051 84883051 "C" "T" "Silent" "SNP" "KM12" 83716 37 "+" NA NA "g.chr16:84883051C>T" "ENST00000262424.5" "c.420C>T" "c.(418-420)taC>taT"
"ASMTL" "X" 1551244 1551244 "C" "T" "Missense_Mutation" "SNP" "KM12" 8623 37 "+" NA NA "g.chrX:1551244C>T" "ENST00000381317.3" "c.427G>A" "c.(427-429)Gaa>Aaa"
"HIST1H1C" "6" 26056587 26056587 "C" "T" "Missense_Mutation" "SNP" "MCF7" 3006 37 "+" NA NA "g.chr6:26056587C>T" "ENST00000343677.2" "c.70G>A" "c.(70-72)Gcg>Acg"
"DHRS2" "14" 24109051 24109051 "G" "T" "Missense_Mutation" "SNP" "NCI-H23" 10202 37 "+" NA NA "g.chr14:24109051G>T" "ENST00000250383.6" "c.367G>T" "c.(367-369)Gtc>Ttc"
"ABAT" "16" 8868853 8868853 "C" "A" "Missense_Mutation" "SNP" "NCI-H23" 18 37 "+" NA NA "g.chr16:8868853C>A" "ENST00000396600.2" "c.1061C>A" "c.(1060-1062)aCc>aAc"
"RGL1" "1" 183885763 183885763 "A" "G" "Silent" "SNP" "RPMI-8226" 23179 37 "+" NA NA "g.chr1:183885763A>G" "ENST00000360851.3" "c.1932A>G" "c.(1930-1932)caA>caG"
"SERPINI1" "3" 167506957 167506957 "G" "A" "Missense_Mutation" "SNP" "SK-MEL-2" 5274 37 "+" NA NA "g.chr3:167506957G>A" "ENST00000295777.5" "c.41G>A" "c.(40-42)aGt>aAt"
"RGL1" "1" 183895387 183895387 "G" "A" "Silent" "SNP" "SK-MEL-5" 23179 37 "+" NA NA "g.chr1:183895387G>A" "ENST00000360851.3" "c.2268G>A" "c.(2266-2268)cgG>cgA"
"LMNB1" "5" 126145987 126145987 "A" "G" "Missense_Mutation" "SNP" "BT-549" 4001 37 "+" NA NA "g.chr5:126145987A>G" "ENST00000261366.5" "c.758A>G" "c.(757-759)cAt>cGt"
"ABAT" "16" 8862065 8862065 "G" "A" "Missense_Mutation" "SNP" "HCC-2998" 18 37 "+" NA NA "g.chr16:8862065G>A" "ENST00000396600.2" "c.619G>A" "c.(619-621)Gac>Aac"
"ABAT" "16" 8875268 8875268 "T" "C" "Missense_Mutation" "SNP" "HCC-2998" 18 37 "+" NA NA "g.chr16:8875268T>C" "ENST00000396600.2" "c.1484T>C" "c.(1483-1485)aTc>aCc"
"CRISPLD2" "16" 84879402 84879402 "A" "G" "Missense_Mutation" "SNP" "HCC-2998" 83716 37 "+" NA NA "g.chr16:84879402A>G" "ENST00000262424.5" "c.251A>G" "c.(250-252)gAc>gGc"
"TYMS" "18" 662291 662291 "T" "G" "Missense_Mutation" "SNP" "HCC-2998" 7298 37 "+" NA NA "g.chr18:662291T>G" "ENST00000323274.10" "c.425T>G" "c.(424-426)tTt>tGt"
"TYMS" "18" 670738 670738 "C" "A" "Missense_Mutation" "SNP" "HCC-2998" 7298 37 "+" NA NA "g.chr18:670738C>A" "ENST00000323274.10" "c.603C>A" "c.(601-603)ttC>ttA"
"SERPINI1" "3" 167507132 167507132 "C" "T" "Silent" "SNP" "HCC-2998" 5274 37 "+" NA NA "g.chr3:167507132C>T" "ENST00000295777.5" "c.216C>T" "c.(214-216)atC>atT"
"SERPINI1" "3" 167543043 167543043 "C" "A" "Missense_Mutation" "SNP" "HCC-2998" 5274 37 "+" NA NA "g.chr3:167543043C>A" "ENST00000295777.5" "c.1165C>A" "c.(1165-1167)Cta>Ata"
"LMNB1" "5" 126141382 126141382 "T" "C" "Silent" "SNP" "HCC-2998" 4001 37 "+" NA NA "g.chr5:126141382T>C" "ENST00000261366.5" "c.636T>C" "c.(634-636)taT>taC"
"TUBB2B" "6" 3226446 3226446 "G" "A" "Missense_Mutation" "SNP" "HCC-2998" 347733 37 "+" NA NA "g.chr6:3226446G>A" "ENST00000259818.7" "c.224C>T" "c.(223-225)tCg>tTg"
"NSMAF" "8" 59547910 59547910 "T" "G" "Missense_Mutation" "SNP" "HCC-2998" 8439 37 "+" NA NA "g.chr8:59547910T>G" "ENST00000038176.3" "c.250A>C" "c.(250-252)Aaa>Caa"
"RGL1" "1" 183854030 183854030 "G" "A" "Silent" "SNP" "HCT-116" 23179 37 "+" NA NA "g.chr1:183854030G>A" "ENST00000360851.3" "c.909G>A" "c.(907-909)caG>caA"
"NEU1" "6" 31827887 31827887 "A" "G" "Missense_Mutation" "SNP" "HOP-92" 4758 37 "+" NA NA "g.chr6:31827887A>G" "ENST00000375631.4" "c.953T>C" "c.(952-954)gTa>gCa"
"SLC17A7" "19" 49937034 49937034 "C" "T" "Silent" "SNP" "MOLT-4" 57030 37 "+" NA NA "g.chr19:49937034C>T" "ENST00000221485.3" "c.816G>A" "c.(814-816)aaG>aaA"
"SLC17A7" "19" 49940003 49940003 "G" "A" "Missense_Mutation" "SNP" "MOLT-4" 57030 37 "+" NA NA "g.chr19:49940003G>A" "ENST00000221485.3" "c.118C>T" "c.(118-120)Cgc>Tgc"
"SLC17A7" "19" 49940014 49940014 "C" "A" "Missense_Mutation" "SNP" "MOLT-4" 57030 37 "+" NA NA "g.chr19:49940014C>A" "ENST00000221485.3" "c.107G>T" "c.(106-108)aGt>aTt"
"ADI1" "2" 3517669 3517669 "T" "C" "Missense_Mutation" "SNP" "MOLT-4" 55256 37 "+" NA NA "g.chr2:3517669T>C" "ENST00000327435.6" "c.199A>G" "c.(199-201)Ata>Gta"
"HIST1H2BD" "6" 26158521 26158521 "G" "A" "Missense_Mutation" "SNP" "MOLT-4" 3017 37 "+" NA NA "g.chr6:26158521G>A" "ENST00000289316.2" "c.124G>A" "c.(124-126)Gtg>Atg"
"NEU1" "6" 31830551 31830551 "C" "T" "Start_Codon_SNP" "SNP" "MOLT-4" 4758 37 "+" NA NA "g.chr6:31830551C>T" "ENST00000375631.4" "c.3G>A" "c.(1-3)atG>atA"
"SERPINI1" "3" 167508214 167508214 "G" "A" "Missense_Mutation" "SNP" "NCI-H322M" 5274 37 "+" NA NA "g.chr3:167508214G>A" "ENST00000295777.5" "c.305G>A" "c.(304-306)aGc>aAc"
"ABAT" "16" 8844294 8844294 "C" "A" "Missense_Mutation" "SNP" "SF-268" 18 37 "+" NA NA "g.chr16:8844294C>A" "ENST00000396600.2" "c.214C>A" "c.(214-216)Cat>Aat"
"SLC17A7" "19" 49939937 49939937 "G" "C" "Missense_Mutation" "SNP" "SN12C" 57030 37 "+" NA NA "g.chr19:49939937G>C" "ENST00000221485.3" "c.184C>G" "c.(184-186)Cgc>Ggc"
"NMI" "2" 152132275 152132275 "G" "A" "Silent" "SNP" "SW-620" 9111 37 "+" NA NA "g.chr2:152132275G>A" "ENST00000243346.5" "c.444C>T" "c.(442-444)ttC>ttT"
"ASMTL" "X" 1540642 1540642 "C" "T" "Nonsense_Mutation" "SNP" "CCRF-CEM" 8623 37 "+" NA NA "g.chrX:1540642C>T" "ENST00000381317.3" "c.1154G>A" "c.(1153-1155)tGg>tAg"
"NMI" "2" 152128240 152128240 "T" "C" "Missense_Mutation" "SNP" "COLO-205" 9111 37 "+" NA NA "g.chr2:152128240T>C" "ENST00000243346.5" "c.641A>G" "c.(640-642)gAc>gGc"
"ASMTL" "X" 1557992 1557992 "C" "T" "Missense_Mutation" "SNP" "HCC-2998" 8623 37 "+" NA NA "g.chrX:1557992C>T" "ENST00000381317.3" "c.271G>A" "c.(271-273)Gtg>Atg"
"NMI" "2" 152128240 152128240 "T" "C" "Missense_Mutation" "SNP" "HCT-116" 9111 37 "+" NA NA "g.chr2:152128240T>C" "ENST00000243346.5" "c.641A>G" "c.(640-642)gAc>gGc"
"SERPINI1" "3" 167506986 167506986 "G" "A" "Missense_Mutation" "SNP" "HCT-116" 5274 37 "+" NA NA "g.chr3:167506986G>A" "ENST00000295777.5" "c.70G>A" "c.(70-72)Gaa>Aaa"
"NMI" "2" 152128240 152128240 "T" "C" "Missense_Mutation" "SNP" "HCT-15" 9111 37 "+" NA NA "g.chr2:152128240T>C" "ENST00000243346.5" "c.641A>G" "c.(640-642)gAc>gGc"
"SERPINI1" "3" 167508342 167508342 "G" "T" "Missense_Mutation" "SNP" "HCT-15" 5274 37 "+" NA NA "g.chr3:167508342G>T" "ENST00000295777.5" "c.433G>T" "c.(433-435)Gta>Tta"
"NMI" "2" 152128240 152128240 "T" "C" "Missense_Mutation" "SNP" "HT29" 9111 37 "+" NA NA "g.chr2:152128240T>C" "ENST00000243346.5" "c.641A>G" "c.(640-642)gAc>gGc"
"ASMTL" "X" 1571701 1571701 "C" "A" "Silent" "SNP" "UACC-62" 8623 37 "+" NA NA "g.chrX:1571701C>A" "ENST00000381317.3" "c.33G>T" "c.(31-33)ctG>ctT"
"TUBB2B" "6" 3225123 3225123 "G" "A" "Silent" "SNP" "A498" 347733 37 "+" NA NA "g.chr6:3225123G>A" "ENST00000259818.7" "c.1200C>T" "c.(1198-1200)ggC>ggT"
"SERPINI1" "3" 167508385 167508385 "C" "G" "Missense_Mutation" "SNP" "A549" 5274 37 "+" NA NA "g.chr3:167508385C>G" "ENST00000295777.5" "c.476C>G" "c.(475-477)aCa>aGa"
"AREG" "4" 75312299 75312299 "G" "A" "Missense_Mutation" "SNP" "HCT-15" 374 37 "+" NA NA "g.chr4:75312299G>A" "ENST00000395748.3" "c.110G>A" "c.(109-111)cGt>cAt"
"TUBB2B" "6" 3225473 3225473 "G" "A" "Missense_Mutation" "SNP" "KM12" 347733 37 "+" NA NA "g.chr6:3225473G>A" "ENST00000259818.7" "c.850C>T" "c.(850-852)Ctc>Ttc"
"TUBB2B" "6" 3227772 3227772 "A" "G" "Silent" "SNP" "SK-MEL-28" 347733 37 "+" NA NA "g.chr6:3227772A>G" "ENST00000259818.7" "c.6T>C" "c.(4-6)cgT>cgC"
"RGL1" "1" 183881395 183881395 "A" "-" "Frame_Shift_Del" "DEL" "HCT-15" 23179 37 "+" NA NA "g.chr1:183881395delA" "ENST00000304685.4" "c.1847delA" "c.(1846-1848)caafs"
"ASMTL" "X" 1553939 1553943 "CGACA" "-" "Frame_Shift_Del" "DEL" "UACC-257" 8623 37 "+" NA NA "g.chrX:1553939_1553943delCGACA" "ENST00000381333.4" "c.324_328delTGTCG" "c.(322-330)ggtgtcgcgfs"
"NSMAF" "8" 59502615 59502615 "G" "-" "Frame_Shift_Del" "DEL" "NCI-H23" 8439 37 "+" NA NA "g.chr8:59502615delG" "ENST00000038176.3" "c.2038delC" "c.(2038-2040)cttfs"
"HIST1H1C" "6" 26056197 26056201 "TTTTC" "-" "Frame_Shift_Del" "DEL" "MOLT-4" 3006 37 "+" NA NA "g.chr6:26056197_26056201delTTTTC" "ENST00000343677.2" "c.456_460delGAAAA" "c.(454-462)aagaaaacafs"