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Problem when reading tab-delimited SNP data files when sex is unknown #30

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gdurif opened this issue Sep 24, 2020 · 1 comment
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Problem when reading tab-delimited SNP data files when sex is unknown #30

gdurif opened this issue Sep 24, 2020 · 1 comment
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gdurif commented Sep 24, 2020

Potential source of the problem:

  • tab delimitation
  • unknow sex (value = 9)
  • other?

Following error:
"Issue with data file.
Issue with IndSeq SNP data file content: 'SEX' column should contain only 'F' for female or 'M' for male (see manual)."
@gdurif gdurif self-assigned this Sep 24, 2020
@gdurif gdurif added the bug Something isn't working label Sep 24, 2020
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gdurif commented Sep 25, 2020

Fixed in afcbd73

  • missing values were not accounted for
  • only female ('F') column was interpreted by R as a column of boolean FALSE values

@gdurif gdurif closed this as completed Sep 25, 2020
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