I encountered a connection timeout error while running the cmonkey function in cMonkey (R version). The error appears to be related to the RCurl package trying to access RSAT servers, which seem to be unavailable.
Steps to Reproduce:
Installed cMonkey in R.
Executed the following code:
library(cMonkey)
e <- cmonkey(organism='pvx', expressionData=ratios)
Encountered the following error:
Loading required package: RCurl
Error in function (type, msg, asError = TRUE) :
Failed to connect to rsat.ulb.ac.be port 80 after 135066 ms: Connection timed out
Possible Cause:
It seems that the RSAT servers are no longer accessible, and cMonkey relies on them. Is there a workaround for running cMonkey offline, or could an alternative method be used to bypass the RSAT dependency?
Would appreciate any guidance on resolving this issue!
I encountered a connection timeout error while running the cmonkey function in cMonkey (R version). The error appears to be related to the RCurl package trying to access RSAT servers, which seem to be unavailable.
Steps to Reproduce:
Installed cMonkey in R.
Executed the following code:
library(cMonkey)
e <- cmonkey(organism='pvx', expressionData=ratios)
Encountered the following error:
Loading required package: RCurl
Error in function (type, msg, asError = TRUE) :
Failed to connect to rsat.ulb.ac.be port 80 after 135066 ms: Connection timed out
Possible Cause:
It seems that the RSAT servers are no longer accessible, and cMonkey relies on them. Is there a workaround for running cMonkey offline, or could an alternative method be used to bypass the RSAT dependency?
Would appreciate any guidance on resolving this issue!