pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>

	<parent>
		<groupId>org.scijava</groupId>
		<artifactId>pom-scijava</artifactId>
		<version>40.0.0</version>
		<relativePath />
	</parent>

	<groupId>nl.uu.science.cellbiology</groupId>
	<artifactId>bigtrace</artifactId>
	<version>0.5.3-SNAPSHOT</version>

	<name>BigTrace</name>
	<description>Tracing of curvilinear structures in 3D</description>
	<url>https://github.com/ekatrukha/bigtrace</url>
	<inceptionYear>2021</inceptionYear>
	<organization>
		<name>Cell Biology, Neurobiology and Biophysics Department of Utrecht University</name>
		<url>https://cellbiology.science.uu.nl/</url>
	</organization>
	
	<licenses>
		<license>
			<name>Simplified BSD License</name>
			<url>https://opensource.org/licenses/BSD-2-Clause</url>
			<distribution>repo</distribution>
		</license>
	</licenses>

    <developers>
        <developer>
            <id>ekatrukha</id>
            <name>Eugene Katrukha</name>
            <url>https://imagej.net/people/ekatrukha</url>
            <roles>
       			<role>founder</role>
				<role>lead</role>
				<role>developer</role>
				<role>debugger</role>
				<role>reviewer</role>
				<role>support</role>
				<role>maintainer</role>
            </roles>
        </developer>
    </developers>
    
	<contributors>
		<contributor>
			<name>TODO</name>
		</contributor>
	</contributors>	
	
	<mailingLists>
		<mailingList>
			<name>Image.sc Forum</name>
			<archive>https://forum.image.sc/tags/imglib2</archive>
		</mailingList>
	</mailingLists>

    <scm>
        <connection>scm:git:git://github.com/ekatrukha/bigtrace</connection>
        <developerConnection>scm:git:git@github.com/ekatrukha/bigtrace</developerConnection>
        <tag>HEAD</tag>
        <url>https://github.com/ekatrukha/bigtrace</url>
    </scm>
    <issueManagement>
        <system>GitHub</system>
        <url>http://github.com/ekatrukha/bigtrace/issues</url>
    </issueManagement>
    <ciManagement>
		<system>GitHub Actions</system>
		<url>https://github.com/ekatrukha/bigtrace/actions</url>
    </ciManagement>

	<properties>
		<package-name>BigTrace</package-name>    
		<license.licenseName>bsd_2</license.licenseName>
        <license.copyrightOwners>Cell Biology, Neurobiology and Biophysics Department of Utrecht University.</license.copyrightOwners>  			
		<!-- NB: Deploy releases to the SciJava Maven repository. -->
		<!--  releaseProfiles>sign,deploy-to-scijava</releaseProfiles -->
	</properties>

	<dependencies>
		<dependency>
		  <groupId>nl.uu.science.cellbiology</groupId>
		  <artifactId>bvv-playground</artifactId>
		  <version>0.3.5-SNAPSHOT</version>
		</dependency>
		
		<!-- BIOFORMATS -->
		<dependency>
			<groupId>ome</groupId>
			<artifactId>bio-formats_plugins</artifactId>
			<exclusions>
				<exclusion><!-- NB: Exclude problematic uber-JAR that bundles commons-io. -->
					<groupId>ch.systems.cisd</groupId>
					<artifactId>jhdf5</artifactId>
				</exclusion>
			</exclusions>
		</dependency>
		
		<!--dependency>
			<groupId>net.imagej</groupId>
			<artifactId>imagej-mesh</artifactId>
		</dependency -->
		<dependency>
		    <groupId>com.github.imglib</groupId>
		    <artifactId>imglib2-mesh</artifactId>
		    <version>e7d4e89</version>
		</dependency>
		
		<dependency>
			<groupId>com.formdev</groupId>
			<artifactId>flatlaf</artifactId>
		</dependency>

		<!-- SCIFIO dependencies -->
		<dependency>
			<groupId>io.scif</groupId>
			<artifactId>scifio</artifactId>
		</dependency>
		
		<!-- Bioformats opener -->
		<dependency>
			<groupId>ch.epfl.biop</groupId>
			<artifactId>bigdataviewer-image-loaders</artifactId>
			<version>0.6.4</version> 
		</dependency>
  		
		<!-- ImgLib2 dependencies -->
		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2</artifactId>
		</dependency>
		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2-algorithm</artifactId>
		</dependency>
		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2-algorithm-gpl</artifactId>
		</dependency>

		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2-realtransform</artifactId>
		</dependency>
		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2-roi</artifactId>
		</dependency>
		<dependency>
			<groupId>net.imglib2</groupId>
			<artifactId>imglib2-ij</artifactId>
		</dependency>

		<dependency>
			<groupId>org.scijava</groupId>
			<artifactId>ui-behaviour</artifactId>
		</dependency>
		<dependency>
			<groupId>org.jogamp.jogl</groupId>
			<artifactId>jogl-all</artifactId>
		</dependency>
		<dependency>
			<groupId>org.joml</groupId>
			<artifactId>joml</artifactId>
		</dependency>
		
		<!-- BDV dependencies -->
		<dependency>
			<groupId>sc.fiji</groupId>
			<artifactId>bigdataviewer-core</artifactId>
		</dependency>
		<dependency>
  			<groupId>sc.fiji</groupId>
  			<artifactId>bigdataviewer_fiji</artifactId>
		</dependency>
		
		<dependency>
			<groupId>net.imagej</groupId>
			<artifactId>ij</artifactId>
		</dependency>
		
		<dependency>
        	<groupId>gov.nist.math</groupId>
        	<artifactId>jama</artifactId>
        </dependency>
	</dependencies>
	
	<repositories>		
		<repository>
			<id>scijava.public</id>
			<url>https://maven.scijava.org/content/groups/public</url>
		</repository>
	</repositories>
	
</project>