diff --git a/changelog.d/18945.misc b/changelog.d/18945.misc
new file mode 100644
index 00000000000..e49077c8f2e
--- /dev/null
+++ b/changelog.d/18945.misc
@@ -0,0 +1 @@
+Introduce `Clock.add_system_event_trigger(...)` to wrap system event callback code in a logcontext, ensuring we can identify which server generated the logs.
diff --git a/scripts-dev/mypy_synapse_plugin.py b/scripts-dev/mypy_synapse_plugin.py
index 439a75fc7e2..e170aabdae3 100644
--- a/scripts-dev/mypy_synapse_plugin.py
+++ b/scripts-dev/mypy_synapse_plugin.py
@@ -74,6 +74,12 @@
     category="synapse-reactor-clock",
 )
 
+PREFER_SYNAPSE_CLOCK_ADD_SYSTEM_EVENT_TRIGGER = ErrorCode(
+    "prefer-synapse-clock-add-system-event-trigger",
+    "`synapse.util.Clock.add_system_event_trigger` should be used instead of `reactor.addSystemEventTrigger`",
+    category="synapse-reactor-clock",
+)
+
 
 class Sentinel(enum.Enum):
     # defining a sentinel in this way allows mypy to correctly handle the
@@ -242,6 +248,13 @@ def get_method_signature_hook(
         ):
             return check_call_when_running
 
+        if fullname in (
+            "twisted.internet.interfaces.IReactorCore.addSystemEventTrigger",
+            "synapse.types.ISynapseThreadlessReactor.addSystemEventTrigger",
+            "synapse.types.ISynapseReactor.addSystemEventTrigger",
+        ):
+            return check_add_system_event_trigger
+
         return None
 
 
@@ -272,6 +285,33 @@ def check_call_when_running(ctx: MethodSigContext) -> CallableType:
     return signature
 
 
+def check_add_system_event_trigger(ctx: MethodSigContext) -> CallableType:
+    """
+    Ensure that the `reactor.addSystemEventTrigger` callsites aren't used.
+
+    `synapse.util.Clock.add_system_event_trigger` should always be used instead of
+    `reactor.addSystemEventTrigger`.
+
+    Since `reactor.addSystemEventTrigger` is a reactor callback, the callback will start out
+    with the sentinel logcontext. `synapse.util.Clock` starts a default logcontext as we
+    want to know which server the logs came from.
+
+    Args:
+        ctx: The `FunctionSigContext` from mypy.
+    """
+    signature: CallableType = ctx.default_signature
+    ctx.api.fail(
+        (
+            "Expected all `reactor.addSystemEventTrigger` calls to use `synapse.util.Clock.add_system_event_trigger` instead. "
+            "This is so all Synapse code runs with a logcontext as we want to know which server the logs came from."
+        ),
+        ctx.context,
+        code=PREFER_SYNAPSE_CLOCK_ADD_SYSTEM_EVENT_TRIGGER,
+    )
+
+    return signature
+
+
 def analyze_prometheus_metric_classes(ctx: ClassDefContext) -> None:
     """
     Cross-check the list of Prometheus metric classes against the
diff --git a/synapse/app/_base.py b/synapse/app/_base.py
index 02c56496bfb..1cf76d2a0b4 100644
--- a/synapse/app/_base.py
+++ b/synapse/app/_base.py
@@ -518,7 +518,9 @@ async def start(hs: "HomeServer") -> None:
     # numbers of DNS requests don't starve out other users of the threadpool.
     resolver_threadpool = ThreadPool(name="gai_resolver")
     resolver_threadpool.start()
-    reactor.addSystemEventTrigger("during", "shutdown", resolver_threadpool.stop)
+    hs.get_clock().add_system_event_trigger(
+        "during", "shutdown", resolver_threadpool.stop
+    )
     reactor.installNameResolver(
         GAIResolver(reactor, getThreadPool=lambda: resolver_threadpool)
     )
@@ -605,7 +607,7 @@ def log_shutdown() -> None:
             logger.info("Shutting down...")
 
     # Log when we start the shut down process.
-    hs.get_reactor().addSystemEventTrigger("before", "shutdown", log_shutdown)
+    hs.get_clock().add_system_event_trigger("before", "shutdown", log_shutdown)
 
     setup_sentry(hs)
     setup_sdnotify(hs)
@@ -720,7 +722,7 @@ def setup_sdnotify(hs: "HomeServer") -> None:
     # we're not using systemd.
     sdnotify(b"READY=1\nMAINPID=%i" % (os.getpid(),))
 
-    hs.get_reactor().addSystemEventTrigger(
+    hs.get_clock().add_system_event_trigger(
         "before", "shutdown", sdnotify, b"STOPPING=1"
     )
 
diff --git a/synapse/handlers/presence.py b/synapse/handlers/presence.py
index d7de20f8841..c787c847bd9 100644
--- a/synapse/handlers/presence.py
+++ b/synapse/handlers/presence.py
@@ -541,7 +541,7 @@ def __init__(self, hs: "HomeServer"):
             self.send_stop_syncing, UPDATE_SYNCING_USERS_MS
         )
 
-        hs.get_reactor().addSystemEventTrigger(
+        hs.get_clock().add_system_event_trigger(
             "before",
             "shutdown",
             run_as_background_process,
@@ -842,7 +842,7 @@ def __init__(self, hs: "HomeServer"):
         # have not yet been persisted
         self.unpersisted_users_changes: Set[str] = set()
 
-        hs.get_reactor().addSystemEventTrigger(
+        hs.get_clock().add_system_event_trigger(
             "before",
             "shutdown",
             run_as_background_process,
diff --git a/synapse/server.py b/synapse/server.py
index 00862eb1376..118dee70512 100644
--- a/synapse/server.py
+++ b/synapse/server.py
@@ -1007,7 +1007,7 @@ def get_media_sender_thread_pool(self) -> ThreadPool:
         )
 
         media_threadpool.start()
-        self.get_reactor().addSystemEventTrigger(
+        self.get_clock().add_system_event_trigger(
             "during", "shutdown", media_threadpool.stop
         )
 
diff --git a/synapse/storage/databases/main/client_ips.py b/synapse/storage/databases/main/client_ips.py
index cf7bc4ac693..c7a330cc83d 100644
--- a/synapse/storage/databases/main/client_ips.py
+++ b/synapse/storage/databases/main/client_ips.py
@@ -455,7 +455,7 @@ def __init__(
             self._client_ip_looper = self._clock.looping_call(
                 self._update_client_ips_batch, 5 * 1000
             )
-            self.hs.get_reactor().addSystemEventTrigger(
+            self.hs.get_clock().add_system_event_trigger(
                 "before", "shutdown", self._update_client_ips_batch
             )
 
diff --git a/synapse/storage/databases/main/lock.py b/synapse/storage/databases/main/lock.py
index 27c3578a316..d0e4a91b595 100644
--- a/synapse/storage/databases/main/lock.py
+++ b/synapse/storage/databases/main/lock.py
@@ -99,7 +99,7 @@ def __init__(
         # lead to a race, as we may drop the lock while we are still processing.
         # However, a) it should be a small window, b) the lock is best effort
         # anyway and c) we want to really avoid leaking locks when we restart.
-        hs.get_reactor().addSystemEventTrigger(
+        hs.get_clock().add_system_event_trigger(
             "before",
             "shutdown",
             self._on_shutdown,
diff --git a/synapse/util/clock.py b/synapse/util/clock.py
index 8d6ab007ba1..043b06a1087 100644
--- a/synapse/util/clock.py
+++ b/synapse/util/clock.py
@@ -206,3 +206,59 @@ def wrapped_callback(*args: Any, **kwargs: Any) -> None:
         # We can ignore the lint here since this class is the one location
         # callWhenRunning should be called.
         self._reactor.callWhenRunning(wrapped_callback, *args, **kwargs)  # type: ignore[prefer-synapse-clock-call-when-running]
+
+    def add_system_event_trigger(
+        self,
+        phase: str,
+        event_type: str,
+        callback: Callable[P, object],
+        *args: P.args,
+        **kwargs: P.kwargs,
+    ) -> None:
+        """
+        Add a function to be called when a system event occurs.
+
+        Equivalent to `reactor.addSystemEventTrigger` (see the that docstring for more
+        details), but ensures that the callback is run in a logging context.
+
+        Args:
+            phase: a time to call the event -- either the string 'before', 'after', or
+                'during', describing when to call it relative to the event's execution.
+            eventType: this is a string describing the type of event.
+            callback: Function to call
+            *args: Postional arguments to pass to function.
+            **kwargs: Key arguments to pass to function.
+        """
+
+        def wrapped_callback(*args: Any, **kwargs: Any) -> None:
+            assert context.current_context() is context.SENTINEL_CONTEXT, (
+                "Expected `add_system_event_trigger` callback from the reactor to start with the sentinel logcontext "
+                f"but saw {context.current_context()}. In other words, another task shouldn't have "
+                "leaked their logcontext to us."
+            )
+
+            # Because this is a callback from the reactor, we will be using the
+            # `sentinel` log context at this point. We want the function to log with
+            # some logcontext as we want to know which server the logs came from.
+            #
+            # We use `PreserveLoggingContext` to prevent our new `system_event`
+            # logcontext from finishing as soon as we exit this function, in case `f`
+            # returns an awaitable/deferred which would continue running and may try to
+            # restore the `loop_call` context when it's done (because it's trying to
+            # adhere to the Synapse logcontext rules.)
+            #
+            # This also ensures that we return to the `sentinel` context when we exit
+            # this function and yield control back to the reactor to avoid leaking the
+            # current logcontext to the reactor (which would then get picked up and
+            # associated with the next thing the reactor does)
+            with context.PreserveLoggingContext(context.LoggingContext("system_event")):
+                # We use `run_in_background` to reset the logcontext after `f` (or the
+                # awaitable returned by `f`) completes to avoid leaking the current
+                # logcontext to the reactor
+                context.run_in_background(callback, *args, **kwargs)
+
+        # We can ignore the lint here since this class is the one location
+        # `addSystemEventTrigger` should be called.
+        self._reactor.addSystemEventTrigger(
+            phase, event_type, wrapped_callback, *args, **kwargs
+        )  # type: ignore[prefer-synapse-clock-add-system-event-trigger]