diff --git a/ena-content-annotations/README.md b/ena-content-annotations/README.md index 8b13789..461641c 100644 --- a/ena-content-annotations/README.md +++ b/ena-content-annotations/README.md @@ -1 +1,37 @@ +# ena_content_annotation +These are a bunch off annotation files to use to decorate ENA exports. + +## INSDC countries + +INSDC Countries + Geography.xlsx - as a multisheet spreadsheet + +This data came from CIA Factbook and UN WHO web pages. +These were collected in July 2024 by Samuel Woollard during his work experience week. + +### GDP.tsv +| INSDC_country | GDP ($) | Population | GDP per capita ($) | Income Level | Year | Note | +|:-------------------------|------------:|-------------:|---------------------:|:---------------|-------:|-----:| +| Burundi | 3.33872e+09 | 1.35901e+07 | 245.673 | Low income | 2022 | | +| Eritrea | 2.065e+09 | 6.34396e+06 | 325.507 | Low income | 2011 | | +| Afghanistan | 1.50216e+10 | 4.01216e+07 | 374.402 | Low income | 2022 | | +| Syria | 8.98006e+09 | 2.38654e+07 | 376.279 | Low income | 2021 | | +| Central African Republic | 2.38262e+09 | 5.65096e+06 | 421.631 | Low income | 2022 | | + +### Physical_Geography.tsv +| INSDC_country | Continent | Land Area (km2) | Distance of Coastline (km) | Hemisphere | Average Temperature (°C) | Climate(s) | +|:----------------|:------------|------------------:|-----------------------------:|:-------------|---------------------------:|:----------------| +| Afghanistan | Asia | 652230 | 0 | Northern | 15.7 | Arid, semiarid | +| Albania | Europe | 28748 | 362 | Northern | 15.17 | Temperate | +| Algeria | Africa | 2381740 | 998 | Northern | 20 | Arid, semiarid | +| American Samoa | Oceania | 224 | 116 | Southern | 28 | Tropical marine | +| Andorra | Europe | 468 | 0 | Northern | 7.17 | Temperate | + +### country_list.tsv +| INSDC_country | UN Country | Note | country_or_ocean | +|:----------------|:------------|:------------------------------------------------------------------------------------------------------|:-------------------| +| Afghanistan | Afghanistan | | country | +| Albania | Albania | | country | +| Algeria | Algeria | | country | +| American Samoa | | n/a- country is not recognised by UN, it is owned by another country or no country officially owns it | country | +| Andorra | Andorra | | country | \ No newline at end of file diff --git a/ena-content-annotations/data/GDP.tsv b/ena-content-annotations/data/GDP.tsv new file mode 100644 index 0000000..4aebb6e --- /dev/null +++ b/ena-content-annotations/data/GDP.tsv @@ -0,0 +1,271 @@ +INSDC_country GDP ($) Population GDP per capita ($) Income Level Year Note +Burundi 3338722827.65691 13590102.0 245.673125 Low income 2022.0 +Eritrea 2065001626.01626 6343956.0 325.5069275 Low income 2011.0 +Afghanistan 15021581920.09 40121552.0 374.4018158 Low income 2022.0 +Syria 8980060818.72145 23865423.0 376.279139 Low income 2021.0 +Central African Republic 2382618615.01694 5650957.0 421.6309937 Low income 2022.0 +Sierra Leone 4094563859.43556 9121049.0 448.9137005 Low income 2022.0 +Madagascar 15302510500.0528 29452714.0 519.5619833 Low income 2022.0 +Mozambique 18406835494.9468 33350954.0 551.9133124 Low income 2022.0 +Democratic Republic of the Congo 65801547619.5974 115403027.0 570.1890958 Low income 2022.0 +Niger 15433852712.2963 26342784.0 585.8854065 Low income 2022.0 +Malawi 13129458325.7379 21763309.0 603.284102 Low income 2022.0 +Chad 12396807590.173 19093595.0 649.2652426 Low income 2022.0 +Yemen 21606160663.0318 32140443.0 672.2421549 Low income 2018.0 +Liberia 4001047000.0 5437249.0 735.8587035 Low income 2022.0 +Somalia 10419541202.0391 13017273.0 800.4396314 Low income 2022.0 +Guinea-Bissau 1714166526.44573 2132325.0 803.8955255 Low income 2022.0 +Burkina Faso 18820219331.2261 23042199.0 816.7718424 Low income 2022.0 +Mali 18780322203.7584 21990607.0 854.0156351 Low income 2022.0 +Gambia 2175099789.97829 2523327.0 861.9967963 Low income 2022.0 +Togo 8169476148.95692 8917994.0 916.0665671 Low income 2022.0 +Uganda 45565333216.4142 49283041.0 924.5641562 Low income 2022.0 +South Sudan 11997800760.2242 12703714.0 944.4325305 Low income 2015.0 +Rwanda 13316160803.5187 13623302.0 977.4547172 Low income 2022.0 +Tajikistan 10490000000.0 10394063.0 1009.229981 Low income 2022.0 +Sudan 51666875363.0963 50467278.0 1023.769805 Low income 2022.0 +Lesotho 2289355249.40148 2227548.0 1027.746764 Lower middle income 2022.0 +Ethiopia 126772703047.701 118550298.0 1069.357945 Lower middle income 2022.0 +Myanmar 62253049891.6449 57527139.0 1082.150981 Lower middle income 2022.0 +Tanzania 75769974505.0106 67462121.0 1123.148418 Lower middle income 2022.0 +Benin 17425418044.2906 14697052.0 1185.640361 Lower middle income 2022.0 +Nepal 41182939600.67 31122387.0 1323.257744 Lower middle income 2022.0 +Comoros 1242519407.77603 900141.0 1380.360863 Lower middle income 2022.0 +Zambia 29163782140.4858 20799116.0 1402.164503 Lower middle income 2022.0 +Cameroon 43644068310.851 30966105.0 1409.414207 Lower middle income 2022.0 +Senegal 27619479059.6131 18847519.0 1465.417229 Lower middle income 2022.0 +Pakistan 374787958882.308 252363571.0 1485.111173 Lower middle income 2022.0 +Guinea 20999229260.4995 13986179.0 1501.427178 Lower middle income 2022.0 +Zimbabwe 27366627153.0954 17150352.0 1595.688949 Lower middle income 2022.0 +Haiti 20253551920.5516 11753943.0 1723.128309 Lower middle income 2022.0 +Cambodia 29504829319.3169 17063669.0 1729.1023 Lower middle income 2022.0 +North Korea 48300000000.0 26298666.0 1836.595058 Lower middle income 2019.0 +Laos 15468785203.7532 7953556.0 1944.889205 Lower middle income 2022.0 +Kenya 113419826113.903 58246378.0 1947.242558 Lower middle income 2022.0 +Kyrgyzstan 12134931017.9465 6172101.0 1966.094044 Lower middle income 2022.0 +Nigeria 472624596925.938 236747130.0 1996.326616 Lower middle income 2022.0 +Timor-Leste 3204753000.0 1506909.0 2126.70639 Lower middle income 2022.0 +Ghana 74263364041.8742 34589092.0 2147.01687 Lower middle income 2022.0 +Solomon Islands 1566360686.10632 726799.0 2155.149754 Lower middle income 2022.0 +Uzbekistan 81140823252.4164 36520593.0 2221.782742 Lower middle income 2022.0 +Mauritania 9744039514.55646 4328040.0 2251.374644 Lower middle income 2022.0 +Kiribati 270520731.599041 116545.0 2321.169776 Lower middle income 2022.0 +Cote d’Ivoire 70173140101.4315 29981758.0 2340.527867 Lower middle income 2022.0 +Nicaragua 15649934214.9276 6676948.0 2343.875408 Lower middle income 2022.0 +India 3353470496885.95 1409128296.0 2379.819145 Lower middle income 2022.0 +Sao Tome and Principe 542686976.457587 223561.0 2427.467118 Lower middle income 2022.0 +Republic of the Congo 15817030156.9459 6097665.0 2593.948693 Lower middle income 2022.0 +Bangladesh 460131688909.301 168697184.0 2727.559986 Lower middle income 2022.0 +Angola 104399746853.401 37202061.0 2806.28933 Lower middle income 2022.0 +Papua New Guinea 31603619036.6338 10046233.0 3145.817844 Lower middle income 2022.0 +Vanuatu 1022219297.50335 318007.0 3214.455334 Lower middle income 2022.0 +Pitcairn Islands 163620.0 50.0 3272.4 Lower middle income 2005.0 +Bhutan 2898227713.22315 884546.0 3276.514408 Lower middle income 2022.0 +Honduras 31426041806.7985 9529188.0 3297.87195 Lower middle income 2022.0 +Sri Lanka 74144875098.0587 21982608.0 3372.888017 Lower middle income 2022.0 +Philippines 404353369604.631 118277063.0 3418.696401 Lower middle income 2022.0 +Morocco 130912558829.84 37387585.0 3501.498126 Lower middle income 2022.0 +Bolivia 44008282879.8842 12311974.0 3574.429485 Lower middle income 2022.0 +Djibouti 3674298479.07676 994974.0 3692.858787 Lower middle income 2022.0 +Tunisia 44579761022.8993 12048847.0 3699.919256 Lower middle income 2022.0 +Cape Verde 2303738020.15148 611014.0 3770.352267 Lower middle income 2022.0 +State of Palestine 19165500000.0 5044000.0 3799.662966 Lower middle income 2022.0 +Viet Nam 410324028883.325 105758975.0 3879.803382 Lower middle income 2022.0 +Lebanon 20992421948.8081 5364482.0 3913.224417 Lower middle income 2022.0 +Samoa 832945205.637185 208853.0 3988.188849 Lower middle income 2022.0 +Moldova 14510490660.2516 3599528.0 4031.220388 Lower middle income 2022.0 +Eswatini 4790922788.70864 1138089.0 4209.620503 Lower middle income 2022.0 +Egypt 476747720364.742 111247248.0 4285.478778 Lower middle income 2022.0 +Micronesia, Federated States of 430000000.0 99603.0 4317.139042 Lower middle income 2022.0 +Cook Islands 33600000.0 7761.0 4329.339003 Upper middle income 2022.0 +Jordan 48653381830.9859 11174024.0 4354.150468 Upper middle income 2022.0 +Namibia 12567271004.6761 2803660.0 4482.451868 Upper middle income 2022.0 +Ukraine 161989520721.19 35661826.0 4542.378753 Upper middle income 2022.0 +Iran 413394567603.552 88386937.0 4677.100278 Upper middle income 2022.0 +Indonesia 1319076267310.16 281562465.0 4684.844151 Upper middle income 2022.0 +Kosovo 9354903061.8898 1977093.0 4731.645432 Upper middle income 2022.0 +Tonga 500274898.085221 104889.0 4769.56495 Upper middle income 2022.0 +Algeria 225560256621.757 47022473.0 4796.860782 Upper middle income 2022.0 +El Salvador 31988920000.0 6628702.0 4825.819595 Upper middle income 2022.0 +Saint Helena 39000000.0 7943.0 4909.983633 Upper middle income 2021.0 +Tuvalu 59065982.0873657 11733.0 5034.175581 Upper middle income 2022.0 +Georgia 24984568959.605 4900961.0 5097.891813 Upper middle income 2022.0 +Guatemala 95003330315.8754 18255216.0 5204.174539 Upper middle income 2022.0 +Mongolia 17146471713.748 3281676.0 5224.913036 Upper middle income 2022.0 +Fiji 4979979531.2725 951611.0 5233.209296 Upper middle income 2022.0 +Paraguay 41952910858.0846 7522549.0 5576.954149 Upper middle income 2022.0 +Suriname 3620987993.32637 646758.0 5598.675228 Upper middle income 2022.0 +Jamaica 17097760686.7775 2823713.0 6055.063205 Upper middle income 2022.0 +Tokelau 10000000.0 1647.0 6071.645416 Upper middle income 2017.0 +Albania 18916368860.55 3107100.0 6088.110734 Upper middle income 2022.0 +Marshall Islands 258774475.097656 41569.0 6225.179222 Upper middle income 2022.0 +Ecuador 116586079000.0 18309984.0 6367.35013 Upper middle income 2022.0 +North Macedonia 13711469681.1535 2135622.0 6420.363567 Upper middle income 2022.0 +Bosnia and Herzegovina 24534663636.1778 3798671.0 6458.749293 Upper middle income 2022.0 +Armenia 19513474648.2429 2976765.0 6555.262054 Upper middle income 2022.0 +South Africa 405270850098.738 60442647.0 6705.048012 Upper middle income 2022.0 +Belize 2830507575.6841 415789.0 6807.557621 Upper middle income 2022.0 +Iraq 286640340965.517 42083436.0 6811.23901 Upper middle income 2022.0 +Colombia 345329875078.512 49588357.0 6963.930567 Upper middle income 2022.0 +Thailand 495645210972.751 69920998.0 7088.646117 Upper middle income 2022.0 +Wallis and Futuna 116150000.0 15964.0 7275.745427 Upper middle income 2021.0 +Azerbaijan 78807470588.2353 10650239.0 7399.59644 Upper middle income 2022.0 +Equatorial Guinea 13486788878.9757 1795834.0 7510.042063 Upper middle income 2022.0 +Peru 246488757636.211 32600249.0 7560.947085 Upper middle income 2022.0 +Libya 55938727098.0174 7361263.0 7599.066505 Upper middle income 2022.0 +Belarus 73775179924.603 9501451.0 7764.622469 Upper middle income 2022.0 +Dominica 607159259.259259 74661.0 8132.214399 Upper middle income 2022.0 +Botswana 20321958850.0363 2450668.0 8292.416129 Upper middle income 2022.0 +Gabon 21071739227.9422 2455105.0 8582.826082 Upper middle income 2022.0 +Brazil 1951923942083.32 220051512.0 8870.304613 Upper middle income 2022.0 +Serbia 63563410720.7093 6652212.0 9555.229256 Upper middle income 2022.0 +Saint Vincent and the Grenadines 966492592.592592 100647.0 9602.795837 Upper middle income 2022.0 +Cuba 107351800000.0 10966038.0 9789.479117 Upper middle income 2020.0 +Turkmenistan 56542857142.8571 5744151.0 9843.553406 Upper middle income 2022.0 +Mauritius 12927979286.0453 1310504.0 9864.89113 Upper middle income 2022.0 +Montenegro 6229801580.79157 599849.0 10385.61635 Upper middle income 2022.0 +Dominican Republic 113537368176.13 10815857.0 10497.3067 Upper middle income 2022.0 +Grenada 1224577777.77778 114621.0 10683.71221 Upper middle income 2022.0 +Turkey 907118435952.688 84119531.0 10783.68395 Upper middle income 2022.0 +Mayotte 2932000000.0 270372.0 10844.3182 Upper middle income 2019.0 +Palau 242333709.716797 21864.0 11083.68595 Upper middle income 2022.0 +Kazakhstan 225496328925.494 20260006.0 11130.12153 Upper middle income 2022.0 +Mexico 1463323889036.56 130739927.0 11192.63199 Upper middle income 2022.0 +Malaysia 407027451714.616 34564810.0 11775.77576 Upper middle income 2022.0 +China 17881783387000.9 1416043270.0 12627.99221 Upper middle income 2022.0 +Costa Rica 69243626028.5936 5265575.0 13150.24969 High income 2022.0 +Bulgaria 90346169914.9349 6782659.0 13320.16985 High income 2022.0 +Argentina 631133384439.944 46994384.0 13429.97462 High income 2022.0 +Niue 26938000.0 2000.0 13469.0 High income 2021.0 +Saint Lucia 2343703788.17323 168038.0 13947.463 High income 2022.0 +Venezuela 482359318767.703 31250306.0 15435.34706 High income 2014.0 +French Guiana 4562000000.0 294071.0 15513.2604 High income 2022.0 +Nauru 153824609.470517 9892.0 15550.40532 High income 2022.0 +Maldives 6170638746.31376 388858.0 15868.6172 High income 2022.0 +Russia 2266029240645.34 140820810.0 16091.57937 High income 2022.0 +Chile 302116539409.03 18664652.0 16186.5616 High income 2022.0 +Romania 298891515898.026 18148155.0 16469.52629 High income 2022.0 +Northern Mariana Islands 858000000.0 51118.0 16784.69424 High income 2020.0 +Panama 76522511780.6222 4470241.0 17118.20722 High income 2022.0 +Croatia 71997070660.4835 4150116.0 17348.20681 High income 2022.0 +Saint Kitts and Nevis 981429629.62963 55133.0 17801.12872 High income 2022.0 +Poland 689763329458.441 38746310.0 17802.0392 High income 2022.0 +Hungary 177006128624.627 9855745.0 17959.69038 High income 2022.0 +Antigua and Barbuda 1867733333.33333 102634.0 18197.99806 High income 2022.0 +Guyana 14718388489.2086 794099.0 18534.70221 High income 2022.0 +Cocos Islands 11012550.0 593.0 18570.91062 High income 2010.0 +French Polynesia 5814661208.90544 303540.0 19156.16133 High income 2022.0 +Barbados 5840673700.0 304139.0 19203.96168 High income 2022.0 +Saint Martin 649206262.0 32996.0 19675.30192 High income 2021.0 +American Samoa 871000000.0 43895.0 19842.8067 High income 2022.0 +Curacao 3073840325.43285 153289.0 20052.58254 High income 2022.0 +Turks and Caicos Islands 1228794382.95121 60439.0 20331.15013 High income 2022.0 +Uruguay 70164683290.3776 3425330.0 20484.06527 High income 2022.0 +Slovakia 115584743573.553 5563649.0 20774.98842 High income 2022.0 +Greece 217581324512.059 10461091.0 20799.10446 High income 2022.0 +Seychelles 2057968519.83091 98187.0 20959.68427 High income 2022.0 +Trinidad and Tobago 30053575132.142 1408966.0 21330.23446 High income 2022.0 +Cyprus 29250532020.0746 1320525.0 22150.68402 High income 2022.0 +Latvia 40422521943.4418 1801246.0 22441.42218 High income 2022.0 +Anguilla 453000000.0 19416.0 23331.27318 High income 2022.0 +Reunion 20339000000.0 859959.0 23651.12755 High income 2014.0 +Guadeloupe 9462000000.0 395700.0 23912.05459 High income 2016.0 +Martinique 9082000000.0 376480.0 24123.45941 High income 2016.0 +Portugal 255196659934.378 10207177.0 25001.68851 High income 2022.0 +British Virgin Islands 1027000000.0 40102.0 25609.69528 High income 2017.0 +Czechia 290565654835.809 10837890.0 26810.16829 High income 2022.0 +Lithuania 71013953448.2085 2628186.0 27020.13992 High income 2022.0 +Bahrain 44383297872.3404 1566888.0 28325.76283 High income 2022.0 +Aruba 3544707788.05664 125063.0 28343.37724 High income 2022.0 +Slovenia 60063475466.3446 2097893.0 28630.3808 High income 2022.0 +Oman 114667360208.062 3901992.0 29386.87732 High income 2022.0 +Spain 1417800466262.65 47280433.0 29987.04488 High income 2022.0 +Saudi Arabia 1108571466666.67 36544431.0 30334.89471 High income 2022.0 +Montserrat 167400000.0 5468.0 30614.48427 High income 2011.0 +Christmas Island 52210000.0 1692.0 30856.974 High income 2021.0 +New Caledonia 9623318718.31459 304167.0 31638.27344 High income 2022.0 +Estonia 37921480881.5429 1193791.0 31765.59455 High income 2022.0 +Bahamas 13136400000.0 410862.0 31972.77918 High income 2022.0 +South Korea 1673916511799.71 52081799.0 32140.14385 High income 2022.0 +Taiwan 760910000000.0 23595274.0 32248.40703 High income 2022.0 +Sint Maarten 1537088715.0838 46215.0 33259.51996 High income 2022.0 +Italy 2066972096553.7 60964931.0 33904.28009 High income 2022.0 +Brunei 16681536466.7183 491900.0 33912.4547 High income 2022.0 +Japan 4256410760723.75 123201945.0 34548.24322 High income 2022.0 +Puerto Rico 113567200000.0 3019450.0 37611.88296 High income 2022.0 +Macau 24464719190.0616 644426.0 37963.58184 High income 2022.0 +Malta 18357069272.7682 469730.0 39080.04444 High income 2022.0 +Andorra 3380602042.84283 85370.0 39599.41482 High income 2022.0 +France 2779092236505.85 68374591.0 40645.10216 High income 2022.0 +Guam 6910000000.0 169532.0 40759.26669 High income 2022.0 +Virgin Islands 4444000000.0 104377.0 42576.42967 High income 2021.0 +United Kingdom 3088839763445.02 68459055.0 45119.52091 High income 2022.0 +New Zealand 246733522841.353 5161211.0 47805.35476 High income 2022.0 +Germany 4082469490797.68 84119100.0 48532.01581 High income 2022.0 +Belgium 583613982019.263 11977634.0 48725.31437 High income 2022.0 +Hong Kong 358696261481.16 7297821.0 49151.14546 High income 2022.0 +Guernsey 3340000000.0 67787.0 49271.9843 High income 2022.0 +Finland 281887430795.721 5626414.0 50100.72682 High income 2022.0 +United Arab Emirates 507063968277.74 10032213.0 50543.58079 High income 2022.0 +Saint Pierre and Miquelon 261200000.0 5132.0 50896.33671 High income 2015.0 +Austria 470941926750.741 8967982.0 52513.70116 High income 2022.0 +San Marino 1855382833.1165 35095.0 52867.44075 High income 2021.0 +Canada 2161483369422.01 38794813.0 55715.78266 High income 2022.0 +Sweden 590409594949.102 10589835.0 55752.48292 High income 2022.0 +Israel 525002447652.773 9402617.0 55835.7793 High income 2022.0 +Greenland 3235809504.29871 57751.0 56030.36319 High income 2021.0 +Falkland Islands (Islas Malvinas) 206400000.0 3662.0 56362.64336 High income 2015.0 +Netherlands 1009398719033.08 17772378.0 56795.929 High income 2022.0 +Kuwait 182809482400.924 3138355.0 58250.09675 High income 2022.0 +Australia 1692956646855.7 26768598.0 63244.12832 High income 2022.0 +Denmark 400167196948.707 5973136.0 66994.48949 High income 2022.0 +Faroe Islands 3555929833.05051 52933.0 67177.93877 High income 2022.0 +Saint Barthelemy 487000000.0 7086.0 68727.06746 High income 2014.0 +Jersey 7151000000.0 103387.0 69167.30343 High income 2022.0 +Isle of Man 6684000000.0 92269.0 72440.36459 High income 2020.0 +USA 25744108000000.0 341963408.0 75283.22446 High income 2022.0 +Iceland 28701830401.6837 364036.0 78843.38472 High income 2022.0 +Gibraltar 2344000000.0 29683.0 78967.75932 High income 2018.0 +Singapore 498474540987.78 6028459.0 82686.89245 High income 2022.0 +Norfolk Island 146700000.0 1748.0 83924.48513 High Income 2016.0 +Switzerland 818426550206.45 8860574.0 92367.21574 High income 2022.0 +Qatar 235770403734.9 2552088.0 92383.33621 High income 2022.0 +Svalbard 277347541.0 2926.0 94787.26623 High income 2021.0 +Cayman Islands 6600844001.53721 66653.0 99032.96178 High income 2022.0 +Ireland 533140011838.276 5233461.0 101871.4025 High income 2022.0 +Bermuda 7827980000.0 72800.0 107527.1978 High income 2022.0 +Norway 593726965415.619 5509733.0 107759.6619 High income 2022.0 +Luxembourg 81641807865.7591 671254.0 121625.8046 High income 2022.0 +Liechtenstein 7364654515.13984 40272.0 182872.8277 High income 2022.0 +Monaco 8784002931.68665 31813.0 276113.6306 High income 2022.0 +Antarctica +Ashmore and Cartier Islands +Baker Island +Bassas da India +Bouvet Island +Clipperton Island +Coral Sea Islands +Europa Island +French Southern and Antarctic Lands +Glorioso Islands +Heard Island and McDonald Islands +Howland Island +Jan Mayen Included for Svalbard +Jarvis Island +Johnston Atoll +Juan de Nova Island +Kingman Reef +Line Islands +Navassa Island +Palmyra Atoll +Spratly Islands +Tromelin Island +Paracel Islands 1440.0 +Wake Island 150.0 2009.0 +Kerguelen Archipelago 130.0 2007.0 +Midway Islands 40.0 2010.0 +South Georgia and The Sandwich Islands 30.0 2006.0 +Western Sahara +Borneo Consists of parts of Indonesia, East Malaysia and Brunei +West Bank Included for State of Palestine +Gaza Strip Included for State of Palestine diff --git a/ena-content-annotations/data/INSDC Countries + Geography.xlsx b/ena-content-annotations/data/INSDC Countries + Geography.xlsx new file mode 100644 index 0000000..fc23899 Binary files /dev/null and b/ena-content-annotations/data/INSDC Countries + Geography.xlsx differ diff --git a/ena-content-annotations/data/Physical_Geography.tsv b/ena-content-annotations/data/Physical_Geography.tsv new file mode 100644 index 0000000..d143131 --- /dev/null +++ b/ena-content-annotations/data/Physical_Geography.tsv @@ -0,0 +1,271 @@ +INSDC_country Continent Land Area (km2) Distance of Coastline (km) Hemisphere Average Temperature (°C) Climate(s) +Afghanistan Asia 652230 0.0 Northern 15.7 Arid, semiarid +Albania Europe 28748 362.0 Northern 15.17 Temperate +Algeria Africa 2381740 998.0 Northern 20.0 Arid, semiarid +American Samoa Oceania 224 116.0 Southern 28.0 Tropical marine +Andorra Europe 468 0.0 Northern 7.17 Temperate +Angola Africa 1246700 1600.0 Southern 24.37 Semiarid +Anguilla North America 91 61.0 Northern 21.68 Tropical +Antarctica Antartica 14200000 17968.0 Southern Antartic +Antigua and Barbuda North America 443 153.0 Northern 27.14 Tropical maritime +Argentina South America 2780400 4989.0 Southern 18.24 Temperate, arid, subantartic +Armenia Asia 29743 0.0 Northern 10.4 Highland continental +Aruba North America 180 68.5 Northern 27.52 Tropical marine +Ashmore and Cartier Islands Oceania 5 74.1 Southern 14.64 Tropical +Australia Oceania 7741220 25760.0 Southern 20.37 Arid, semiarid +Austria Europe 83871 0.0 Northern 8.82 Temperate +Azerbaijan Asia 86600 0.0 Northern 14.47 Semiarid steppe +Bahamas North America 13880 3542.0 Northern 25.84 Tropical +Bahrain Asia 760 161.0 Northern 27.98 Arid +Baker Island Oceania 2 4.8 Northern 26.67 Equatorial +Bangladesh Asia 148460 580.0 Northern 27.74 Tropical +Barbados North America 430 97.0 Northern 27.61 Tropical +Bassas da India Africa 1 35.2 Southern 25.39 Tropical maritime +Belarus Europe 207600 0.0 Northern 8.66 Temperate, continental +Belgium Europe 30528 66.5 Northern 11.41 Temperate +Belize North America 22966 386.0 Northern 26.64 Tropical +Benin Africa 112622 121.0 Northern 29.12 Tropical +Bermuda North America 54 103.0 Northern 22.31 Subtropical +Bhutan Asia 38394 0.0 Northern 15.6 Sub tropical, alpine +Bolivia South America 1098581 0.0 Southern 18.3 Semiarid +Borneo Asia 743330 40.0 Northern Tropical +Bosnia and Herzegovina Europe 51197 20.0 Northern 12.32 Temperate +Botswana Africa 581730 0.0 Southern 24.56 Semiarid +Bouvet Island Antartica 49 29.6 Southern -1.0 Antartic +Brazil South America 8515770 7491.0 Equatorial 25.72 Tropical +British Virgin Islands North America 151 80.0 Northern 27.13 Subtropical +Brunei Asia 5765 161.0 Northern 28.43 Tropical +Bulgaria Europe 110879 354.0 Northern 13.4 Temperate +Burkina Faso Africa 274200 0.0 Northern 31.14 Semiarid +Burundi Africa 27830 0.0 Southern 20.47 Equatorial +Cambodia Asia 181035 443.0 Northern 28.97 Tropical +Cameroon Africa 475440 402.0 Northern 26.81 Tropical, semiarid +Canada North America 9984670 202080.0 Northern 2.09 Temperate, subartic +Cape Verde Africa 4033 965.0 Northern 24.3 Temperate +Cayman Islands North America 264 160.0 Northern 27.54 Tropical marine +Central African Republic Africa 622984 0.0 Northern 28.52 Tropical +Chad Africa 1284000 0.0 Northern 30.88 Tropical +Chile South America 756102 6435.0 Southern 14.49 Temperate, mediterranean +China Asia 9596960 14500.0 Northern 14.62 Tropical, subartic +Christmas Island Oceania 135 138.9 Southern 26.13 Tropical +Clipperton Island Oceania 6 11.1 Northern Tropical +Cocos Islands Asia 14 26.0 Southern Tropical +Colombia South America 1138910 3208.0 Equatorial 24.2 Tropical +Comoros Africa 2235 340.0 Southern 26.96 Tropical marine +Cook Islands Oceania 236 120.0 Southern 24.98 Tropical oceanic +Coral Sea Islands Oceania 3 3095.0 Southern Tropical +Costa Rica North America 51100 1290.0 Northern 23.57 Tropical and subtropical +Cote d’Ivoire Africa 322463 515.0 Northern 28.01 Tropical, semiarid +Croatia Europe 56594 5835.0 Northern 13.5 Mediterranean, continental +Cuba North America 110860 3735.0 Northern 26.91 Tropical +Curacao South America 444 364.0 Northern 27.52 Tropical marine +Cyprus Europe 9251 648.0 Northern 21.71 Mediterranean +Czechia Europe 78867 0.0 Northern 10.07 Temperate +Democratic Republic of the Congo Africa 2344858 37.0 Equatorial 26.82 Tropical +Denmark Europe 43094 7314.0 Northern 9.89 Temperate +Djibouti Africa 23200 314.0 Northern 29.8 Arid +Dominica North America 751 148.0 Northern 27.31 Tropical +Dominican Republic North America 48670 1288.0 Northern 26.07 Tropical maritime +Ecuador South America 283561 2237.0 Equatorial 17.26 Tropical +Egypt Africa 1001450 2450.0 Northern 24.9 Arid +El Salvador North America 21041 307.0 Northern 27.31 Tropical +Equatorial Guinea Africa 28051 296.0 Northern 26.08 Tropical +Eritrea Africa 117600 2234.0 Northern 26.99 Arid +Estonia Europe 45228 3794.0 Northern 7.51 Temperate +Eswatini Africa 17364 0.0 Northern 20.77 Subtropical +Ethiopia Africa 1104300 0.0 Northern 22.23 Tropical +Europa Island Africa 28 22.5 Southern Tropical maritime +Falkland Islands (Islas Malvinas) South America 12173 1288.0 Southern 7.85 Maritime +Faroe Islands Europe 1393 1117.0 Northern 7.94 Subartic +Fiji Oceania 18274 1129.0 Southern 26.49 Tropical +Finland Europe 338145 1250.0 Northern 5.64 Subartic +France Europe 643801 3427.0 Northern 12.44 Temperate, alpine +French Guiana South America 83534 378.0 Northern 27.45 Tropical +French Polynesia Oceania 4167 2525.0 Southern 25.73 Tropical +French Southern and Antarctic Lands Africa/Antartica 439781 2948.4 Southern 21.92 Subantartic +Gabon Africa 267667 885.0 Equatorial 26.7 Tropical +Gambia Africa 11300 80.0 Northern 29.58 Tropical +Gaza Strip Asia 360 40.0 Northern Arid +Georgia Asia 69700 310.0 Northern 12.11 Mediterranean +Germany Europe 357022 2389.0 Northern 10.68 Temperate +Ghana Africa 238533 539.0 Northern 28.86 Tropical +Gibraltar Europe 7 12.0 Northern 18.0 Mediterranean +Glorioso Islands Africa 5 35.2 Southern Tropical maritime +Greece Europe 131957 13676.0 Northern 17.02 Mediteranean +Greenland North America 2166086 44087.0 Northern -10.07 Artic, subartic +Grenada North America 344 121.0 Northern 27.6 Tropical +Guadeloupe North America 1628 306.0 Northern 27.28 Subtropical +Guam Oceania 544 125.5 Northern 28.33 Tropical marine +Guatemala North America 108889 400.0 Northern 21.72 Tropical +Guernsey Europe 78 50.0 Northern 12.5 Temperate +Guinea Africa 245857 320.0 Northern 27.06 Tropical +Guinea-Bissau Africa 36125 350.0 Northern 29.72 Tropical +Guyana South America 214969 459.0 Northern 27.79 Tropical +Haiti North America 27750 1771.0 Northern 26.48 Tropical, semiarid +Heard Island and McDonald Islands Antartica 412 101.9 Southern Antartic +Honduras North America 112090 823.0 Northern 24.43 Subtropical +Hong Kong Asia 1108 733.0 Northern 24.11 Subtropical +Howland Island Oceania 2 6.4 Northern Equatorial +Hungary Europe 93028 0.0 Northern 13.04 Temperate +Iceland Europe 103000 4970.0 Northern 3.17 Temperare, subartic +India Asia 3287263 7000.0 Northern 25.97 Tropical +Indonesia Asia 1904569 54716.0 Equatorial 27.11 Tropical +Iran Asia 1648195 2440.0 Northern 18.43 Arid, semiarid +Iraq Asia 438317 58.0 Northern 26.77 Arid +Ireland Europe 70273 1448.0 Northern 10.1 Temperate maritime +Isle of Man Europe 572 160.0 Northern 10.64 Temperate +Israel Asia 21937 273.0 Northern 22.69 Mediterranean, semiarid +Italy Europe 301340 7600.0 Northern 14.47 Mediterranean, alpine +Jamaica North America 10991 1022.0 Northern 26.83 Tropical +Jan Mayen Europe 377 124.1 Northern -2.0 Artic maritime +Japan Asia 377915 29751.0 Northern 15.19 Temperate +Jarvis Island North America 5 8.0 Southern 26.69 Equatorial +Jersey Europe 116 70.0 Northern 12.47 Temperate +Johnston Atoll Oceania 3 34.0 Northern Tropical +Jordan Asia 89342 26.0 Northern 22.17 Arid +Juan de Nova Island Africa 5 24.1 Southern Tropical maritime +Kazakhstan Asia 2724900 0.0 Northern 9.33 Continental, arid, semiarid +Kenya Africa 580367 536.0 Equatorial 22.5 Tropical, arid +Kerguelen Archipelago Africa 7215 1110.0 Northern 4.9 Subantartic +Kingman Reef North America 1 3.0 Northern 27.96 Tropical +Kiribati Oceania 811 1143.0 Equatorial 27.6 Tropical marine +Kosovo Europe 10887 0.0 Northern 12.36 Continental +Kuwait Asia 17818 499.0 Northern 28.83 Arid +Kyrgyzstan Asia 199951 0.0 Northern 9.61 Continental +Laos Asia 236800 0.0 Northern 25.39 Tropical +Latvia Europe 64589 498.0 Northern 8.07 Temperate +Lebanon Asia 10400 225.0 Northern 19.92 Mediterranean +Lesotho Africa 30355 0.0 Southern 16.06 Temperate, alpine +Liberia Africa 111369 579.0 Northern 26.86 Tropical +Libya Africa 1759540 1770.0 Northern 23.87 Mediterranean, arid +Liechtenstein Europe 160 0.0 Northern 8.62 Continental, alpine +Line Islands Asia 310 Equatorial 26.7 Equatorial +Lithuania Europe 65300 90.0 Northern 8.77 Continental +Luxembourg Europe 2586 0.0 Northern 10.06 Continental +Macau Asia 28 41.0 Northern 24.37 Subtropical +Madagascar Africa 587041 4828.0 Southern 23.88 Tropical, arid +Malawi Africa 118484 0.0 Southern 23.02 Subtropical +Malaysia Asia 329847 4675.0 Northern 28.28 Tropical +Maldives Asia 298 644.0 Equatorial 28.21 Tropical +Mali Africa 1240192 0.0 Northern 31.77 Subtropical, arid +Malta Europe 316 196.8 Northern 19.94 Mediteranean +Marshall Islands Oceania 181 370.4 Northern 28.16 Tropical +Martinique North America 1128 350.0 Northern 27.58 Subtropical +Mauritania Africa 1030700 754.0 Northern 29.76 Arid +Mauritius Africa 2040 177.0 Southern 25.09 Tropical +Mayotte Africa 374 185.2 Southern 27.17 Tropical +Mexico North America 1964375 9330.0 Northern 22.03 Tropical, desert +Micronesia, Federated States of Oceania 702 6112.0 Northern 28.54 Tropical +Midway Islands North America 6 15.0 Northern Subtropical +Moldova Europe 33851 0.0 Northern 12.59 Continental +Monaco Europe 2 4.1 Northern 16.04 Mediterranean +Mongolia Asia 1564116 0.0 Northern 1.22 Continental, arid +Montenegro Europe 13812 293.5 Northern 12.24 Continental +Montserrat North America 102 40.0 Northern 27.26 Tropical +Morocco Africa 716550 2945.0 Northern 21.46 Mediterranean, arid +Mozambique Africa 799380 2470.0 Southern 25.62 Tropical, subtropical +Myanmar Asia 676578 1930.0 Northern 27.02 Tropical +Namibia Africa 824292 1572.0 Southern 24.46 Arid +Nauru Oceania 21 30.0 Southern 28.36 Tropical +Navassa Island North America 5 8.0 Northern 26.0 Tropical marine +Nepal Asia 147181 0.0 Northern 22.0 Subtropical +Netherlands Europe 41543 451.0 Northern 11.59 Temperate +New Caledonia Oceania 18575 2254.0 Southern 23.44 Tropical +New Zealand Oceania 268838 15134.0 Southern 13.07 Temperate +Nicaragua North America 130370 910.0 Northern 26.48 Tropical +Niger Africa 1267000 0.0 Northern 32.04 Arid +Nigeria Africa 923768 853.0 Northern 29.46 Equatorial, tropical, arid +Niue Oceania 260 64.0 Southern 26.02 Tropical +Norfolk Island Oceania 36 32.0 Southern Subtropical +North Korea Asia 120538 2495.0 Northern 9.25 Temperate +North Macedonia Europe 25713 0.0 Northern 13.29 Continetal +Northern Mariana Islands Oceania 464 1482.0 Northern 28.08 Tropical marine +Norway Europe 323802 83281.0 Northern 5.03 Temperate +Oman Asia 309500 2092.0 Northern 29.2 Arid +Pakistan Asia 796095 1046.0 Northern 20.89 Arid, continental +Palau Oceania 459 1519.0 Northern 28.53 Tropical +Palmyra Atoll North America 12 14.5 Northern 29.0 Equatorial +Panama North America 75420 2490.0 Northern 26.87 Tropical maritime +Papua New Guinea Oceania 462840 5152.0 Southern 23.03 Tropical +Paracel Islands Asia 8 518.0 Northern Tropical +Paraguay South America 406752 0.0 Southern 25.06 Subtropical, temperate +Peru South America 1285216 2414.0 Southern 17.63 Tropical, arid +Philippines Asia 300000 36289.0 Northern 27.22 Tropical marine +Pitcairn Islands Oceania 47 51.0 Southern 23.17 Tropical +Poland Europe 312685 440.0 Northern 10.6 Temperate +Portugal Europe 92090 1793.0 Northern 16.81 Mediterranean maritime +Puerto Rico North America 9104 501.0 Northern 26.96 Tropical marine +Qatar Asia 11586 563.0 Northern 29.74 Arid +Republic of the Congo Africa 342000 169.0 Equatorial 27.33 Tropical +Reunion Africa 2512 207.0 Southern 23.22 Tropical +Romania Europe 238391 225.0 Northern 12.86 Continental, temperate +Russia Asia/Europe 17098242 37653.0 Northern 5.27 Continental, temperate, subartic +Rwanda Africa 26338 0.0 Southern 20.44 Temperate +Saint Barthelemy North America 25 32.0 Northern 27.14 Tropical +Saint Helena Africa 394 60.0 Southern 20.5 Tropical marine +Saint Kitts and Nevis North America 261 135.0 Northern 27.1 Tropical +Saint Lucia North America 616 158.0 Northern 27.77 Tropical +Saint Martin North America 50 58.9 Northern 27.07 Tropical marine +Saint Pierre and Miquelon North America 242 120.0 Northern 6.58 Temperate +Saint Vincent and the Grenadines North America 389 84.0 Northern 26.72 Tropical +Samoa Oceania 2831 403.0 Southern 27.65 Tropical +San Marino Europe 61 0.0 Northern 16.66 Mediterranean +Sao Tome and Principe Africa 964 209.0 Equatorial 26.54 Tropical +Saudi Arabia Asia 2149690 2640.0 Northern 27.01 Arid +Senegal Africa 196722 531.0 Northern 30.32 Tropical +Serbia Europe 77474 0.0 Northern 13.25 Continetal +Seychelles Africa 455 491.0 Southern 27.59 Tropical marine +Sierra Leone Africa 71740 402.0 Northern 27.61 Tropical +Singapore Asia 719 193.0 Northern 25.1 Tropical +Sint Maarten North America 34 58.9 Northern 27.07 Tropical marine +Slovakia Europe 49035 0.0 Northern 10.78 Temperate +Slovenia Europe 20273 46.6 Northern 11.8 Mediterranean, continental, alpine +Solomon Islands Oceania 28896 5313.0 Southern 27.76 Tropical +Somalia Africa 637657 3025.0 Equatorial 27.91 Arid +South Africa Africa 1219090 2798.0 Southern 21.22 Semiarid, subtropical +South Georgia and the South Sandwich Islands Antartica 3903 Southern 0.02 Subantartic +South Korea Asia 99720 2413.0 Northern 13.6 Temperate +South Sudan Africa 644329 0.0 Northern 29.5 Subtropical +Spain Europe 505370 4964.0 Northern 16.61 Mediterranean +Spratly Islands Asia 5 926.0 Northern 27.0 Tropical +Sri Lanka Asia 65610 1340.0 Northern 27.46 Tropical +State of Palestine Asia 6025 40.0 Southern 22.6 Arid +Sudan Africa 1861484 853.0 Northern 30.04 Arid +Suriname South America 163820 386.0 Northern 27.51 Tropical +Svalbard Europe 62045 3587.0 Northern -2.0 Artic +Sweden Europe 450295 3218.0 Northern 7.25 Temperate +Switzerland Europe 41277 0.0 Northern 9.1 Temperate, alpine +Syria Asia 187437 193.0 Northern 21.76 Arid +Taiwan Asia 35980 1566.3 Northern 24.43 Tropical +Tajikistan Asia 144100 0.0 Northern 7.86 Continental, semiarid +Tanzania Africa 947300 1424.0 Southern 24.22 Tropical +Thailand Asia 513120 3219.0 Northern 28.64 Tropical +Timor-Leste Asia 14874 706.0 Southern 26.57 Tropical +Togo Africa 56785 56.0 Northern 26.08 Tropical +Tokelau Oceania 12 101.0 Southern 28.55 Tropical +Tonga Oceania 747 419.0 Southern 25.73 Tropical +Trinidad and Tobago South America 5128 362.0 Northern 27.72 Tropical +Tromelin Island Africa 1 3.7 Southern Tropical maritime +Tunisia Africa 163610 1148.0 Northern 21.09 Mediterranean, semiarid +Turkey Asia/Europe 783562 7200.0 Northern 14.96 Mediterranean +Turkmenistan Asia 488100 0.0 Northern 19.59 Continental, semiarid +Turks and Caicos Islands North America 948 389.0 Northern 26.73 Tropical marine +Tuvalu Oceania 26 24.0 Southern 28.72 Tropical +Uganda Africa 241038 0.0 Equatorial 23.47 Tropical +Ukraine Europe 603550 2782.0 Northern 11.38 Temperate, mediterranean +United Arab Emirates Asia 83600 1318.0 Northern 29.78 Arid +United Kingdom Europe 243610 12429.0 Northern 10.75 Temperate +Uruguay South America 176215 660.0 Northern 18.62 Temperate +USA North America 9833517 19924.0 Northern 12.64 Subtropical, temperate, alpine +Uzbekistan Asia 447400 0.0 Northern 17.67 Continental, semiarid +Vanuatu Oceania 12189 2528.0 Southern 26.28 Tropical +Venezuela South America 912050 2800.0 Northern 26.65 Tropical +Viet Nam Asia 331210 3444.0 Northern 26.25 Tropical +Virgin Islands North America 1910 188.0 Northern 27.14 Subtropical +Wake Island Oceania 7 19.3 Northern 26.33 Tropical +Wallis and Futuna Oceania 142 129.0 Southern 28.13 Tropical +West Bank Asia 5860 0.0 Northern Arid +Western Sahara Asia 266000 1110.0 Northern 26.74 Arid +Yemen Asia 527968 2400.0 Northern 25.53 Arid +Zambia Africa 752618 0.0 Southern 23.33 Tropical +Zimbabwe Africa 390757 0.0 Southern 22.73 Tropical diff --git a/ena-content-annotations/data/country_list.tsv b/ena-content-annotations/data/country_list.tsv new file mode 100644 index 0000000..f733852 --- /dev/null +++ b/ena-content-annotations/data/country_list.tsv @@ -0,0 +1,281 @@ +INSDC_country UN Country Note country_or_ocean +Afghanistan Afghanistan country +Albania Albania country +Algeria Algeria country +American Samoa n/a- country is not recognised by UN, it is owned by another country or no country officially owns it country +Andorra Andorra country +Angola Angola country +Anguilla Anguilla country +Antarctica country +Antigua and Barbuda Antigua and Barbuda country +Arctic Ocean ocean_or_sea +Argentina Argentina country +Armenia Armenia country +Aruba country +Ashmore and Cartier Islands country +Atlantic Ocean ocean_or_sea +Australia Australia country +Austria Austria country +Azerbaijan Azerbaijan country +Bahamas Bahamas country +Bahrain Bahrain country +Baltic Sea ocean_or_sea +Baker Island country +Bangladesh Bangladesh country +Barbados Barbados country +Bassas da India country +Belarus Belarus country +Belgium Belgium country +Belize Belize country +Benin Benin country +Bermuda Bermuda country +Bhutan Bhutan country +Bolivia Bolivia (Plurinational State of) country +Borneo country +Bosnia and Herzegovina Bosnia and Herzegovina country +Botswana Botswana country +Bouvet Island country +Brazil Brazil country +British Virgin Islands British Virgin Islands country +Brunei Brunei Darussalam country +Bulgaria Bulgaria country +Burkina Faso Burkina Faso country +Burundi Burundi country +Cambodia Cambodia country +Cameroon Cameroon country +Canada Canada country +Cape Verde Cabo Verde country +Cayman Islands Cayman Islands country +Central African Republic Central African Republic country +Chad Chad country +Chile Chile country +China China (mainland) country +Christmas Island country +Clipperton Island country +Cocos Islands country +Colombia Colombia country +Comoros Comoros country +Cook Islands Cook Islands country +Coral Sea Islands country +Costa Rica Costa Rica country +Cote d’Ivoire Côte d'Ivoire country +Croatia Croatia country +Cuba Cuba country +Curacao Curaçao country +Cyprus Cyprus country +Czechia Czechia country +Democratic Republic of the Congo Democratic Republic of the Congo country +Denmark Denmark country +Djibouti Djibouti country +Dominica Dominica country +Dominican Republic Dominican Republic country +Ecuador Ecuador country +Egypt Egypt country +El Salvador El Salvador country +Equatorial Guinea Equatorial Guinea country +Eritrea Eritrea country +Estonia Estonia country +Eswatini Kingdom of Eswatini country +Ethiopia Ethiopia country +Europa Island country +Falkland Islands (Islas Malvinas) country +Faroe Islands country +Fiji Fiji country +Finland Finland country +France France country +French Guiana country +French Polynesia French Polynesia country +French Southern and Antarctic Lands country +Gabon Gabon country +Gambia Gambia country +Gaza Strip country +Georgia Georgia country +Germany Germany country +Ghana Ghana country +Gibraltar country +Glorioso Islands country +Greece Greece country +Greenland Greenland country +Grenada Grenada country +Guadeloupe country +Guam country +Guatemala Guatemala country +Guernsey country +Guinea Guinea country +Guinea-Bissau Guinea-Bissau country +Guyana Guyana country +Haiti Haiti country +Heard Island and McDonald Islands country +Honduras Honduras country +Hong Kong China, Hong Kong SAR country +Howland Island country +Hungary Hungary country +Iceland Iceland country +India India country +Indian Ocean ocean_or_sea +Indonesia Indonesia country +Iran Iran, Islamic Republic of country +Iraq Iraq country +Ireland Ireland country +Isle of Man country +Israel Israel country +Italy Italy country +Jamaica Jamaica country +Jan Mayen country +Japan Japan country +Jarvis Island country +Jersey country +Johnston Atoll country +Jordan Jordan country +Juan de Nova Island country +Kazakhstan Kazakhstan country +Kenya Kenya country +Kerguelen Archipelago country +Kingman Reef country +Kiribati Kiribati country +Kosovo Kosovo country +Kuwait Kuwait country +Kyrgyzstan Kyrgyzstan country +Laos Lao People's Democratic Republic country +Latvia Latvia country +Lebanon Lebanon country +Lesotho Lesotho country +Liberia Liberia country +Libya Libya country +Liechtenstein Liechtenstein country +Line Islands country +Lithuania Lithuania country +Luxembourg Luxembourg country +Macau China, Macao Special Administrative Region country +Madagascar Madagascar country +Malawi Malawi country +Malaysia Malaysia country +Maldives Maldives country +Mali Mali country +Malta Malta country +Marshall Islands Marshall Islands country +Martinique country +Mauritania Mauritania country +Mauritius Mauritius country +Mayotte country +Mediterranean Sea ocean_or_sea +Mexico Mexico country +Micronesia, Federated States of Micronesia (Federated States of) country +Midway Islands country +Moldova Republic of Moldova country +Monaco Monaco country +Mongolia Mongolia country +Montenegro Montenegro country +Montserrat Montserrat country +Morocco Morocco country +Mozambique Mozambique country +Myanmar Myanmar country +Namibia Namibia country +Nauru Nauru country +Navassa Island country +Nepal Nepal country +Netherlands Netherlands country +New Caledonia New Caledonia country +New Zealand New Zealand country +Nicaragua Nicaragua country +Niger Niger country +Nigeria Nigeria country +Niue country +Norfolk Island country +North Korea Democratic People's Republic of Korea country +North Macedonia Republic of North Macedonia country +North Sea ocean_or_sea +Northern Mariana Islands country +Norway Norway country +Oman Oman country +Pacific Ocean ocean_or_sea +Pakistan Pakistan country +Palau Palau country +Palmyra Atoll country +Panama Panama country +Papua New Guinea Papua New Guinea country +Paracel Islands country +Paraguay Paraguay country +Peru Peru country +Philippines Philippines country +Pitcairn Islands country +Poland Poland country +Portugal Portugal country +Puerto Rico Puerto Rico country +Qatar Qatar country +Republic of the Congo Congo country +Reunion country +Romania Romania country +Ross Sea ocean_or_sea +Russia Russian Federation country +Rwanda Rwanda country +Saint Barthelemy country +Saint Helena country +Saint Kitts and Nevis Saint Kitts and Nevis country +Saint Lucia Saint Lucia country +Saint Martin country +Saint Pierre and Miquelon country +Saint Vincent and the Grenadines Saint Vincent and the Grenadines country +Samoa Samoa country +San Marino San Marino country +Sao Tome and Principe Sao Tome and Principe country +Saudi Arabia Saudi Arabia country +Senegal Senegal country +Serbia Serbia country +Seychelles Seychelles country +Sierra Leone Sierra Leone country +Singapore Singapore country +Sint Maarten country +Slovakia Slovakia country +Slovenia Slovenia country +Solomon Islands Solomon Islands country +Somalia Somalia country +South Africa South Africa country +South Georgia and the South Sandwich Islands country +South Korea Republic of Korea country +South Sudan South Sudan country +Southern Ocean ocean_or_sea +Spain Spain country +Spratly Islands country +Sri Lanka Sri Lanka country +State of Palestine State of Palestine country +Sudan Sudan country +Suriname Suriname country +Svalbard country +Sweden Sweden country +Switzerland Switzerland country +Syria Syrian Arab Republic country +Taiwan country +Tajikistan Tajikistan country +Tanzania United Republic of Tanzania country +Tasman Sea ocean_or_sea +Thailand Thailand country +Timor-Leste Timor-Leste country +Togo Togo country +Tokelau country +Tonga Tonga country +Trinidad and Tobago Trinidad and Tobago country +Tromelin Island country +Tunisia Tunisia country +Turkey Türkiye country +Turkmenistan Turkmenistan country +Turks and Caicos Islands Turks and Caicos Islands country +Tuvalu Tuvalu country +USA United States country +Uganda Uganda country +Ukraine Ukraine country +United Arab Emirates United Arab Emirates country +United Kingdom United Kingdom of Great Britain and Northern Ireland country +Uruguay Uruguay country +Uzbekistan Uzbekistan country +Vanuatu Vanuatu country +Venezuela Venezuela, Bolvarian Republic of country +Viet Nam Viet Nam country +Virgin Islands country +Wake Island country +Wallis and Futuna country +West Bank country +Western Sahara country +Yemen Yemen country +Zambia Zambia country +Zimbabwe Zimbabwe country diff --git a/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt new file mode 100644 index 0000000..3c1f693 --- /dev/null +++ b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt @@ -0,0 +1,2063 @@ +16627489 +6 "United Kingdom +18 "Wageningen University, Netherlands" +1 . +6 /country=""South Africa +6 0021 [Switzerland] +1 0023 [Switzerland] +3 0024 [Switzerland] +4 0025 [Switzerland] +3 0026 [Switzerland] +1 0027 [Switzerland] +8 004 [USA] +47 004 [United States] +17 025 [Germany] +16 1 km offshore of Warnemuende, Germany +6 11 km SE Pto Inca, Huanuco PE +6 13 km E Pto Inca, Huanuco PE +1 1896 +1 2011 +1 2011-03-20 +2 32.9000N 117.2550W Scripps Institute of Oceanography, pier, La Jolla, California USA +1 42.6667° N, 76.5333° W +13 505 [Nicaragua] +88 80¡ 19' 87.5"" W +48 80¡ 20' 77.0"" W +12 85¡ 48' 23.01"" W +9 85¡ 48' 23.6"" W +9 85¡ 49' 55.3"" W +12 85¡ 50' 28.5"" W +9 85¡ 50' 40.0"" W +12 85¡ 51' 51.7"" W +12 85¡ 56' 39.1"" W +12 85¡ 56' 6.5"" W +16 ? +16 AU +140 AUS +1 Abkhazia +1 Adagoi, Portugal +22 Adelaide, South Australia, Australia +1 Admiralty Island, AK +2 Adriatic Sea +19 Afganistan +2452 Afghanistan +2 Africa +419 Ailaoshan +1 Aix en Provence +11 Ajusco +2 Al-Hofuf +5 Alabama, USA +13 Alaska +11 Alaska, North Pacific +23 Alaska, USA +520 Albania +67 Albay +24 Alberta (AB) +5 Alborz Province, Iran +3 Alconorales Natural Park, Andaluzia, Spain +7 Alcudia Bay (Mallorca, Spain) +15 Alde estuary, Suffolk, UK +3 Aldeia das Dez, Portugal +1723 Algeria +2 All samples were harvested in the Indian River Bay, DE. +4 Alnarp, Swden +9 Alpha Ridge +2 Amami Island +1 America +964 American Samoa +5 Amman, Jordan +5 An'hui, China +1 Anchorage, AK +1 Andalusia +1 Andalusien +1 Andaman +14 Andaman Sea +1 Andora +48 Andorra +2471 Angola +12 Anguilla +1 Anqing, Anhui +8 Antarctic +6 Antarctic Peninsula +43112 Antarctica +24 Antarctica;Lake Fryxell +24 Antarctica;West Lobe Bonney +19 Antigua and Barbuda +1 Antilles +1 Apache_Reservation,_AZ +1 Appenzell Innerrhoden, Eastern Switzerland +12 Arabian Sea +7 Arctic +24248 Arctic Ocean +6 Arctic Ocean;south pole +9 Arctic deep sea +98 Arctic ocean +2 Ardley cove ¬Fildes Peninsula +31858 Argentina +161 Argentina, Unknown, Unknown +10 Argentine Sea +5 Arica, Chile +10 Arkona Sea +4 Armagh, Northern Ireland +679 Armenia +24 Aruba +1 Assam, India +2 At +68 Atacama Desert +2 Atl +13 Atlantic +90541 Atlantic Ocean +5 Atlantic Ocean Mauritanian Upwelling +5 Atlantic Ocean Patagonian Continental Shelf +1 Atlantic Ocearn +1 Atlantis II, Red Sea +87 Attapeu, Laos +5 Auburn, AL +5 Auckland, New Zealand +1 Austalia +1 Austrailia +368278 Australia +1 Australia, China +4 Australia, New South Wales +1 Australia, New South Wales, Bathurst +1 Australia, New South Wales, Bigga +1 Australia, New South Wales, Carcoar +1 Australia, New South Wales, Forbes +1 Australia, New South Wales, Moss Vale +1 Australia, New South Wales, Mt Hunter +1 Australia, New South Wales, Yass +3 Australia, South Australia, Kangaroo Island +7 Australia, Tasmania, King Island +3 Australia, Victoria +1 Australia, Victoria, Hamilton +3 Australia, Western Australia +3 Australia, Western Australia, Albany +1 Australia;United Kingdom +74481 Austria +1 Austria, Burgenland +1 Austria, NA, NA +27 Austria, Schiltern (+48°31’ +15°37’) +1 Austria, Styria +1 Austria, Upper Austria +3 Austria, Vienna +539 Austria;Austria +1 Austrilia +1 Avala, Beli Potok, Serbia +1 Azerbaidjan, NA, NA +760 Azerbaijan +1 Azerbeijan +10 Azov sea +1 BEL +3 BRA +1 BRD3-NUTM1 +1 BRD4-NUTM1 +256 BW;Botswana +1 BaZhong,China +2 Babs Cove +18 Baffin Bay +2172 Bahamas +99 Bahrain +1 Baie de Plaisance, Ã?les-de-la-Madeleine (Québec, Canada) +1 Baker Bay +1 Baker Island +21 Balaklava SA +20 Balearic Islands. Spain. +11359 Baltic Sea +13 Baltimore, Md +4 Banambani +5 Bancoumana +26266 Bangladesh +1 Banteay, Cambodia +5 Baoji +1 Baoting,China +1 Baranof Island, AK +457 Barbados +15 Bari +4 Barinas, Venezuela +2 Barletta +117 Barro Colorado Island +2 Barrow, AK +2 Bass Strait +1 Baulkham Hills;NSW;Australia;Australia +15 Bay St. Louis Mississippi +1 Bay of Biscay (NE Atlantic Ocean) +1 Bay of Cadiz +15 Bayou La Batre Alabama +1 Beaufort Sea +89 Beijing +1 Beijing, China +1441 Belarus +9 Belgian Congo +62976 Belgium +1 Belgium, Belgium, Brussels +1 Belgium, Belgium, Verviers +6 Belgium, Campine Region +1 Belgium;Ireland +5234 Belize +2 Bellingshausen Sea +11 Belt Sea +1 Beltsville, Maryland, USA +27 Bengolea. Cba. Argentina +5 Bengued, Philippines +1970 Benin +1 Benin, Borgou, Kpessou +4 Benin, Borgou, Tchaourou, Kaki Koka +1 Benin, Tebo +1 Benin, Yatanifaga +27 Berchidda +16 Bering Sea +4 Bering Sea, North Pacific +1 Berlgium +2378 Bermuda +1 Bermuda Atlantic Time Series (BATS) station site +85 Bermuda Atlantic Time-series Study +2 Bern, Switzerland +13 Bet-Dagan, Israel +1 Bhopal Madhya Pradesh India +18 Bhopal, Madhya Pradesh, India +9 Bhopal,Madhya Pradesh, India +887 Bhutan +1 Bhutan, Bumthang +1 Biala Woda, near Szczawnica, Poland +113 Binh Phuoc, Vietnam +4 Bird Island, South Georgia +352 Bizerta Lagoon, Tunisia +10 Black Sea +2 Black Sea Carbonate reef +1 Bloemfontein [South Africa] +1 Bloemfortein [South Africa] +5 Bobo-dioulasso, Burkina Faso +5 Bogota, Colombia +14 Bohai Sea +1 Boiling Springs Lake +4417 Bolivia +46 Bonaire Island +334 Borneo +10 Bornholm Basin +449 Bosnia and Herzegovina +1 Bosque_del_Apache,_NM +26 Boston [USA] +7489 Botswana +4 BotswanaOrNamibia +2 Bougainville +815 Boulder, CO, USA +21 Bouvet Island +1 Branford, CT +6 Bransfield Strait +158842 Brazil +1 Brazil - Paraíba state +107 Brazil, Rio de Janeiro +213 Brazil, Unknown, Unknown +1 Brazil/Northeastern region +5 Bretagne, France +1 British Isles +51 British Virgin Islands +20 Brownsville, TX +410 Brunei +1 Brunei;Kuala Belalong;Ulu Temburong National Park +2 Brunei_Darussalam +36 Brunsbuttel, Elbe estuary, Schleswig-Holstein, Germany +6 Buchstein, Germany +6 Buenos Aires +4696 Bulgaria +7737 Burkina Faso +9 Burkina_Faso +12 Burma +366 Burundi +1 Buy from germany +20 C1 from Halden, 59N, Norway +132 CA +11 CAR;Central African Republic +180 CEU +1 CHE +21 CHILE +1 Cairns QLD, Australia.-16.9185514,145.77805480000006 +5 Cairo, Egypt +4 Calgary [Canada] +1 California +4 California state, USA +5 California, North Pacific +1 Caloundra, Queensland +97 Cambodge +10668 Cambodia +1 Cambodia;Ari Ksatr +5 Cameron highland, Malaysia +9508 Cameroon +1 Cameroun +398332 Canada +1 Canada Airdie AB +1 Canada Airdrie AB +13 Canada Basin +1 Canada Ft. Macleod AB +5 Canada Lunbrek AB +28 Canada Macleod AB +1 Canada Waingright AB +1 Canada, British Columbia, Vancouver Island, Barkley Sound +1 Canada, British Columbia, Vancouver Island, Port Alberni +1 Canada, Lunbrek AB +3 Canada, North Western Territories +215 Canada;CAN +1 Canada;United Kingdom +9 Cañar, Ecuador +2 Canary Islands +1 Canary Isles +12 Caney Fork River Riparian Zone +1 Canonsburg, PA. USA +5 Cape Town, South Africa +1314 Cape Verde +1 Capiz province, Philippines +15 Capulin, Nevado de Toluca, Estado de Mexico, Mexico +4 Caratão, Abrantes, Portugal +6 Caribbean Sea +1 Caribean sea +1 Carltonville [South Africa] +13 Castelo de Vide, Portugal +793 Cayman Islands +1 Cayo, Belize +2924 Central African Republic +2 Central America +69 Central Arctic Ocean/Eurasian basin;Arctic Ocean +1 Central Switzerland +1 Central_America +1 Cerkvenjak, Slovenia +10 Cerro San Andres +731 Chad +1 Chai nat, Thailand +1 Chak 13 BC, Bahawalpur, Pakistan +7 Changshu City +1 Charles River Laboratories +21 Charleston SA +3 Cheasapeake Bay +1 Chennai +110 Chernobyl Nuclear Power Plant Exclusion Zone +10 Chesapeake Bay +4 Chesapeake bay station 858 +16 Chiba Perfecture, Japan +5 Chifeng, Inner Mongolia , China +34413 Chile +2059516 China +1 China +5 China Agricultural University pig farm,Zhuozhou, China +1 China Nanjing Forestry University +1 China Shaoxing +1 China Yunnan +3 China(PRC) +4 China, Guangxi +1 China, Hong Kong +2 China, Province of Zhejiang +200 China;China +1 China;south China +1 China ºDali +1 China ºLijiang +2 China ºShangri-La +7 China ºShilin +8 China_Zhuhai +1 China：Xiamen +5 Chittagong, Bangladesh +1 Chize +1 Chon Buri, Thailand +4 Chongqing, China +1 Choptank River +114 Christmas Island +24 Chukchi Sea +1 Chukichi Shelf +1 Chungbuk +31 Cincinnati, OH +7 Ciudad del Carmen, Campeche +10 Clipperton Island +31 Cocos Islands +14 Cofre de Perote +23043 Colombia +17 Colombia, Chinchina, Naranjal experimental station +1 Colombia, Tolima, Mariquita Reserve +1 Colombia;Caroline Island;Leticia +4 Columbia +1 Columbia River, US +365 Commonwealth of Puerto Rico +402 Comoros +3 Comorres +1 Concepci—n, Chile +22 Congo +334 Cook Islands +4 Coral Sea +103 Coral Sea Islands +5 Cordoba, Argentina +2 Corio Bay +4 Corsica (France) +18330 Costa Rica +2 Costa Rica;France +19 Costa_Rica +8181 Cote d'Ivoire +1 Côte d'Ivoire +34 Cote_d'Ivoire +1 Cowells_sand_after +1 Cowells_water +18 Crete +2 Crimea, Black sea near Sevastopol, Karantinnaya Bay +2 Crimea, Black sea near Sevastopol, Martinova Bay +1 Crimea, Black sea near Sevastopol, Sevastopol Bay +7203 Croatia +16 Croatia, , Zagreb +1 Croatia, Adriatic sea, Island of Ugljan +7 Croatia;Mediterranean Sea +26 Crystal River Florida +2578 Cuba +1 Cuber, Slovenia +3469 Curacao +1 Curacao Island +23 Cuxhaven, Elbe estuary, Schleswig-Holstein, Germany +1 Cypress Hills, Alta. +8631 Cyprus +7 Cyprus, Mediterranean Sea +3 Cyprus;Mediterranean Sea +84 Cystic fibrosis lung +54327 Czech Republic +1 Czech republic +880 Czechia +185 Czechoslovakia +1 Czechoslovia(pre1989) +2 DE +1 DNK +196 DR Congo +1 DRC +7 Dalat, Vietnam +5 Dar es salaam, Tanzania +1 Darwin, Norther Territory +2 Dauphin Island +2 Daxin,China +1 Decatur, IL, US +1 Delft +2 Delhi +11 Democratic Republic of Congo +10463 Democratic Republic of the Congo +6 Democratic_People's_Republic_of_Korea +686013 Denmark +2 Denmark, Jutland, Ebeltoft +5 Denmark, Jutland, Kolind +37 Denmark, Kopenhagen +1 Denmark, Zealand, Helsinge +206 Denmark;Denmark +1 Denver, Colorado +8 Deppoldshausen +1 Derwent River, Tasmania +3 Destuben, Germany +40 Deutschland +2 Dhaka, Bangladesh +1 D�_nemark +15 Dilatada, Nevado de Toluca, Estado de Mexico, Mexico +2 Diomede, AK +1 Discovery Deep, Red Sea +516 Djibouti +176 Dominica +2165 Dominican Republic +1 Dominican_Republic +2 Duan,China +3 Dushanbe, Tajikistan +1 Dutch Guiana +4 ESP +22 East China Sea +1 East Scotia Ridge +1 East Sea, Korea +16 East Timor +8 Eastern Mediterranean Sea +5 Eastern Tropical South Pacific +28621 Ecuador +6037 Egypt +4 Egypt and India +10 Egypt's Red Sea Coast +2 Egypt;Mediterranean Sea +3 Ekaterinburg, Russia +21 El Hierro +999 El Salvador +7 El Zamorano +2 Emutete, Kenya +356 England +1 England & Wales +1 England, Bedfordshire +2 England, Berkshire +1 England, Cambridgeshire +7 England, Cheshire +3 England, Cornwall and Isles of Scilly +4 England, Derbyshire +8 England, Devon +2 England, Dorset +2 England, East Riding and North Lincolnshire +1 England, Essex +1 England, Gloucestershire +1 England, Greater London +2 England, Greater Manchester +5 England, Hampshire +2 England, Herefordshire +2 England, Hertfordshire +6 England, Lancashire +2 England, Leicestershire and Rutland +2 England, Lincolnshire +2 England, Merseyside +5 England, Norfolk +1 England, North Yorkshire +3 England, Northamptonshire +1 England, Northumberland +2 England, Nottinghamshire +2 England, Oxfordshire +1 England, Shropshire +1 England, Somerset excl North +1 England, Suffolk +1 England, Surrey +1 England, Tayside +2 England, West Midlands +1 England, West Yorkshire +7 England, Wiltshire +11 English Channel +5 Enniskillen, Northern Ireland +1 Equador +360 Equatorial Guinea +813 Eritrea +41091 Estonia +4 Estuary +193 Eswatini +22955 Ethiopia +124 Ethiopia, Oromiya, Jimma +2 Ethiopia, Oromiya, Jimma Zone, Jimma +1 Ethiopia, Oromiya, Jimma, +125 Europa Island +10 Europe +1 FRA +1 FSU +3 Faisalabad, Pakistan +102 Falkland Islands (Islas Malvinas) +7 Falkland Islands, Great Britain +1 Fanzana +3 Farminton, MN +1 Farms at Hai Phong, Quang Ninh, and Khanh Hoa provinces in Vietnam +1 Faroe +361 Faroe Islands +3 Fayetteville, AR USA +4967 Fiji +213285 Finland +2 Finland, Finland Proper, Turku +2 Finland, Haapavesi +12 Finland, Hameelinna +1 Finland, Harma +1 Finland, Kotka +1 Finland, Kuusamo +1 Finland, Loppi +4 Finland, Northern Ostrobothnia, Oulu +5 Finland, Oulu +1 Finland, Rääkkylä +1 Finland, Sodankylä +18 Finland, Southern Finland +1 Finland, Switzerland and Spain +3 Finland, Turku +8 Finland, Uusimaa, Helsinki +1 Finland, Uusimaa, Helsinki, Laakso +10 Finland/KilpisjŠrvi/KilpisjŠrvi +5 Finland/KilpisjŠrvi/Saana 11 +5 Finland/KilpisjŠrvi/Saana 12 +4 Finland/KilpisjŠrvi/Saana 15 +10 Finland/KilpisjŠrvi/SaanajŠrvi +10 Finland/KilpisjŠrvi/Ts‰hkaljŠrvi +29 Finland/souther Finland +23 Finland/southern Finland +1 Finse, Norway +17 Florida, USA +27 Fort DeSoto Beach +4 Foshan,China +2 Fox Creek, Alta. +6 Fram Strait +6 Fram Strait;Arctic Ocean;Arctic Ocean +225162 France +10 France (Breuil Forest) +1 France (soldier) +1 France Marseille +1 France and Algeria +40 France and Vietnam +1 France, , +13 France, Burgundy +9 France, Burgundy, Chardonnay +2 France, Ligurian Sea +2 France/Mediterranean sea +2 France;Atlantic Ocean +365 France;France +1 France;Guadaloupe Island +5 France;Mediterranean Sea +13 Frankreich +7481 French Guiana +8620 French Polynesia +63 French Southern and Antarctic Lands +1 French West Indies +1 French_Guiana +18 Freshwater of Pearl Estuary +4 Frula, Huesca +12 Ft. Collins, CO +21 Fuerteventura Lanzarote +5 Fujian, China +8 Fujian,China +1 Fuzhou +51248 GAZ +87 GBR +25 GER +4 GERMANY +1 GRC +1 GUATEMALA +2509 Gabon +1 Gabon (OgooueÊMaritime) +6751 Gambia +5 Gansu, China +19 Gary, Indiana +76 Gaza Strip +1 Gazipur, Bangladesh +8 Gdansk Deep +1 Geneve +11982 Georgia +72 Georgia Republic +1 German +1 German, Sennickerode +1113824 Germany +1 Germany, , +43 Germany, , Aachen +42 Germany, , Berlin +112 Germany, , Cologne +1 Germany, , Freiburg +12 Germany, , Giessen +25 Germany, , Hamburg +2 Germany, , Lübeck +116 Germany, , Tübingen +13 Germany, 1, Cologne +5 Germany, 2, Cologne +7 Germany, 3, Cologne +6 Germany, 4, Cologne +6 Germany, 5, Cologne +2 Germany, 6, Cologne +4 Germany, 7, Cologne +1 Germany, ?, Berlin +13 Germany, ?, Freiburg +3 Germany, ?, Giessen +1 Germany, ?, Lübeck +3 Germany, ?, München +1 Germany, B1, Cologne +1 Germany, B2, Cologne +1 Germany, B3, Cologne +5 Germany, B4, Tübingen +1 Germany, B5, Tübingen +1 Germany, B6, Tübingen +1 Germany, B7, Hamburg +6 Germany, BB, Berlin +1 Germany, BB, Cottbus +1 Germany, BE, Berlin +1 Germany, BSIBK7594, Tübingen +1 Germany, BW, BW +1 Germany, BY, Munich +2 Germany, Bavaria +16 Germany, Berlin +1 Germany, C1, Cologne +1 Germany, C2, Cologne +1 Germany, C3, Cologne +1 Germany, C4, Tübingen +1 Germany, C6, Tübingen +1 Germany, C7, Hamburg +1 Germany, CO180, Tübingen +1 Germany, CO192, Tübingen +1 Germany, CO194, Tübingen +1 Germany, CO196, Tübingen +1 Germany, CO200_HQ, Tübingen +1 Germany, CO213, Tübingen +1 Germany, CO22, Tübingen +1 Germany, CO228, Tübingen +1 Germany, CO234, Tübingen +1 Germany, CO246_HQ, Tübingen +1 Germany, CO247, Tübingen +1 Germany, CO248, Tübingen +1 Germany, CO249, Tübingen +1 Germany, CO250, Tübingen +1 Germany, CO253, Tübingen +1 Germany, CO26, Tübingen +1 Germany, CO261, Tübingen +1 Germany, CO263, Tübingen +1 Germany, CO264, Tübingen +1 Germany, CO271, Tübingen +1 Germany, CO274, Tübingen +1 Germany, CO281, Tübingen +1 Germany, CO282, Tübingen +1 Germany, CO289, Tübingen +1 Germany, CO290, Tübingen +1 Germany, CO293, Tübingen +1 Germany, CO301, Tübingen +1 Germany, CO310, Tübingen +1 Germany, CO322, Tübingen +1 Germany, CO333, Tübingen +1 Germany, CO342, Tübingen +1 Germany, CO353, Tübingen +1 Germany, CO359, Tübingen +1 Germany, CO4, Tübingen +1 Germany, CO403, Tübingen +1 Germany, CO404, Tübingen +1 Germany, CO410, Tübingen +1 Germany, CO418-1, Tübingen +1 Germany, CO471, Tübingen +1 Germany, CO472, Tübingen +1 Germany, CO483, Tübingen +1 Germany, CO488, Tübingen +1 Germany, CO49, Tübingen +1 Germany, CO493, Tübingen +1 Germany, CO495, Tübingen +1 Germany, CO51, Tübingen +1 Germany, CO52, Tübingen +1 Germany, CO525, Tübingen +1 Germany, CO53, Tübingen +1 Germany, CO533, Tübingen +1 Germany, CO536, Tübingen +1 Germany, CO537, Tübingen +1 Germany, CO539, Tübingen +1 Germany, CO55, Tübingen +1 Germany, CO556, Tübingen +1 Germany, CO566, Tübingen +1 Germany, CO57, Tübingen +1 Germany, CO582, Tübingen +1 Germany, CO584, Tübingen +1 Germany, CO591, Tübingen +1 Germany, CO593, Tübingen +1 Germany, CO60, Tübingen +1 Germany, CO605, Tübingen +1 Germany, CO614, Tübingen +1 Germany, CO641, Tübingen +1 Germany, CO658, Tübingen +1 Germany, CO66, Tübingen +1 Germany, CO685, Tübingen +1 Germany, CO716, Tübingen +1 Germany, CO73, Tübingen +1 Germany, CO742, Tübingen +1 Germany, CO746, Tübingen +1 Germany, CO766, Tübingen +1 Germany, CO783, Tübingen +1 Germany, CO784, Tübingen +1 Germany, CO795, Tübingen +1 Germany, CO803, Tübingen +1 Germany, CO804, Tübingen +1 Germany, CO805, Tübingen +1 Germany, CO807-1, Tübingen +1 Germany, CO81, Tübingen +1 Germany, CO814, Tübingen +1 Germany, CO820, Tübingen +1 Germany, CO840, Tübingen +1 Germany, CO849, Tübingen +1 Germany, CO85, Tübingen +1 Germany, CO860, Tübingen +1 Germany, CO863, Tübingen +1 Germany, CO864, Tübingen +1 Germany, CO866, Tübingen +1 Germany, CO87, Tübingen +1 Germany, CO883, Tübingen +1 Germany, CO888, Tübingen +1 Germany, CO890, Tübingen +1 Germany, CO892, Tübingen +1 Germany, CO93, Tübingen +1 Germany, CO94, Tübingen +1 Germany, CO96, Tübingen +1 Germany, Co21, Tübingen +1 Germany, Co38, Tübingen +1 Germany, Co45_HQ, Tübingen +1 Germany, Co626, Tübingen +1 Germany, Co627, Tübingen +1 Germany, Co629, Tübingen +1 Germany, Co63, Tübingen +1 Germany, Co656, Tübingen +1 Germany, Co667, Tübingen +1 Germany, Co690, Tübingen +1 Germany, Co692, Tübingen +1 Germany, Co709, Tübingen +1 Germany, Co726, Tübingen +1 Germany, Co736, Tübingen +1 Germany, Co747, Tübingen +1 Germany, Co760, Tübingen +40 Germany, Cologne +35 Germany, Frieburg +11 Germany, Giessen +5 Germany, Göttingen +10 Germany, Lower Saxony +21 Germany, Lübeck +1 Germany, MV, Schwerin +91 Germany, Muenster +1 Germany, NEWCN1156, Tübingen +1 Germany, NI, Braunschweig +1 Germany, NI, Sennickerode +3 Germany, NW, Bochum +13 Germany, NW, Cologne +2 Germany, NW, Leverkusen +2 Germany, NW, NRW +2 Germany, RP, Mainz +1 Germany, Reipoltskirchen, LK Kusel +2 Germany, SN, Dresden +3 Germany, SN, SN +5 Germany, Sennickerode +1 Germany, TH, TH +1 Germany, Thuringia, Weimarer Land +5 Germany, Tübingen +1 Germany, co459, Tübingen +2 Germany/Libya +8 Germany/Syria +809 Germany;Germany +33797 Ghana +4 Gibraltar +16 Glorioso Islands +5 Gongga, Tibet, China +1 Goundri +19 Gran Canaria +20 Grand Terre Island Louisiana +1 Great Britain +2 Great Salt Lake +1 Greatwall ¬Fildes Peninsula +26766 Greece +2 Greece, , +33 Greece;Mediterranean Sea +9872 Greenland +96 Grenada +11 Groningen, Holland +4138 Guadeloupe +1 Guadeloupe, French West Indies +1862 Guam +12 Guanabara Bay, Rio de Janeiro, Brazil +1 Guangdong China +4 Guangdong, China +16 Guangdong,China +4 Guangzhou ¬ China +2 Guangzhou, Guangdong Province, China +1952 Guatemala +4 Guaymas Basin +13 Guernsey +3 Guiana +2490 Guinea +2363 Guinea-Bissau +5 Guizhou, China +1 Gulf Stream +3 Gulf of Aqaba +7 Gulf of California +4 Gulf of California (Sea of Cortés) +1 Gulf of California and Eastern Tropical North Pacific +25 Gulf of Maine +108 Gulf of Mexico +6 Gulf of Mexico (MC118) +2 Gulf of Naples +46 Guri, Republic of Korea +2976 Guyana +4 Hainan +4 Hainan, China +6 Hainan,China +2411 Haiti +4 Haji Buang lake, Kalimantan, Indonesia +4 Halkidiki, Greece +1 Hangzhou +4 Hangzhou Bay +15 Hanzhong +3 Havana, Cuba +1 Havre aux Maisons lagoon +171 Hawaii, USA +1 Hawaii-Hilo Experimental farm +21 Heard Island and McDonald Islands +5 Heilongjiang, China +64 Helgoland +9 Helgoland Roads, German Bight, North Sea +3 Helgoland, Germany +21 Helgoland, Scleswig-Holstein, Germany +2 Helsinki, Finland +1 Hidden Valley, Montana +12 Hirusen highland, Okayama Perfecture, Japan +1 Hochi Min City, Vietnam +1 Hochi Minh city area, Vietnam +3 Hofuf +5 Hohhot, Inner Mongolia, China +2 Holland +3 Höllberg, Germany +17 Holmegaard +4395 Honduras +40421 Hong Kong +1 Hong Kong SRA +1 Hong_Kong +1 Hongkong +3 Hortus Leiden, the Netherlands +1 Hortus, Leiden, the Netherlands +1 Hot spring +1 Houston, B.C. Canada +1 Houston, BC +6 Houston, Texas +2 Howland Island +5 Huaral, Peru +4 Huizhou,China +2 Hunan,China +14315 Hungary +5 Hungray +1 Hwy_93_Kingman,_AZ +4 Hyderabad, Telangana, India +1 Hyderabad,Telangana, India +1 INDIA +74 IRL +174 ISL +33659 Iceland +1 Ilan, Taiwan,China +1 Illinois +1 Ilocos, Nagsanga, Philippines +2 Iloilo province, Philippines +110924 India +2 India (Bihar) +6 India (Delhi) +6 India, +1 India, Kashmir +1 Indian +14308 Indian Ocean +3 Indianapolis, Indiana +79 Indochina +19 Indochina_Indonesia_Admixed +36 Indochina_Indonesia_Philippines +17619 Indonesia +2 Indonesia, Java +21 Inman Valley SA +1 Inner Mongolia, China +3 Ionian Sea +9874 Iran +1784 Iraq +158107 Ireland +1 Ireland, Connaught, Galway +1 Ireland, Munster +2 Ireland, Munster, Cork +1 Ireland;Sweden +1 Ireland;United Kingdom +704 Iriomote +3 Irish Sea +1 Irland +33 Isle of Man +1 Isolated from home–make koumiss in Sinkiang of China +62417 Israel +30 Israel / Dead Sea +2 Israel(Carmel) +3 Israel(Central) +2 Israel(Negev) +483 Israel;Israel +2 Israel;Mediterranean Sea +5 Istambul, Turkey +21 Italia +135147 Italy +2 Italy(Bergamo) +2 Italy(Sardinia) +2 Italy(Tuscany) +1 Italy, , +6 Italy, Cagliari +1 Italy, Lamole +8 Italy, Long term monitoring station MareChiara, Naples Bay +1 Italy, Province of Vercelli +1 Italy, Santa Sofia (Forlì) +6 Italy, Sassari +1 Italy, Trasanni di Urbino (Pesaro Urbino) +1 Italy, central-L'Aquila (Scoppito) +10 Italy;Mediterranean Sea +17 Ivory Coast +12 Iztaccihuatl +710 Jamaica +4 Jan Mayen +289896 Japan +1 Japan Ehime, Niihama +141 Japan Sea +5 Japan Tokyo +1 Japan, Gifu +1 Japan, Okayama +5 Japan, Shimane +2 Japan, Tokyo +3 Japan, Tottori +1 Japan, Yamaguchi +28 Japan;Japan +4 Japana +251 Jersey +3 Jhabua, Madhya Pradesh, India +2 Jiangmen,China +2 Jiangsu +4 Jilin Province +1 JingZhou,China +118 Joensuu, Finland +3 Johnston Atoll +2638 Jordan +1 Joydebpur, Bangladesh +150 Juan de Nova Island +164 KOREA +4 KSA +9 Kadapa,Andhra Pradesh, India +5 Kagoshima, Japan +1 Kagosima Bay +4 Kakaban lake, Kalimantan, Indonesia +4 Kalix water from a bridge close to Svartbyn, Sweden +10 Kampala [Uganda] +1 Kampong, Cambodia +1 Kanchanaburi, Thailand +3 Kanowna Island, Australia +4 Katmandu, Nepal +7 Kattegat +5909 Kazakhstan +2 Kebrit Deep, Red Sea +53 Kela +1 Kenai Peninsula, AK +79457 Kenya +1 Kenya;Nanyuki +411 Kerguelen Archipelago +4 Kerguelen Ile Haute +2 Key West Coral Nursery +1 Khagrachari, Bangladesh +2 Khagrachari, Dighinala, Bangladesh +2 Kho Qua, Vietnam +1 Khumaltar, Nepal +9 Khun Han, Thailand +1 Kikuyu town [Kenya] +16 Kingaroy SA +114 Kinshasa, DRCongo +1361 Kiribati +3 Klein Curacao +1 Kobilje - Sv. Martin, Slovenia +26 Kolkata +2 Kongsfjorden, Spitsbergen +18610 Korea +3 Korea, Republic of +5 Korea, South +37 Korea,_Republic_of +119 Kosovo +5 Kota Kinabalu, Malaysia +1508 Kuwait +47 Kyiv area +15 Kyrgyz +958 Kyrgyzstan +2 Kyrgyzystan +16 La Gomera +12 La Malinche +22 La Palma +5 La Serena, Chile +2 La Sotonera (Castillo de Castej???n), Huesca +76 LabControl test +5 Laboratory +4 Laboratory (Benin) +4 Laboratory (French Polynesia) +3 Laboratory (USA) +1 Laboratory USA +1 Lake 239, Experimental Lakes Area, Ontario +1 Lake Baikal +15 Lake Erie +1 Lake Geneva +1 Lake Giles, PA +1 Lake Huron_HU37 +1 Lake Huron_HU38 +1 Lake Huron_HU54 +1 Lake Huron_HU951 +1 Lake Huron_HU952 +1 Lake Huron_HU953 +6 Lake Konstanz, Germany +1 Lake Michigan_MI18 +1 Lake Michigan_MI40 +1 Lake Nordåsvatnet +1 Lake Ontario_ON25 +1 Lake Ontario_ON41 +1 Lake Placid Rd, Caravonica QLD 4878, Australia +3 Lake Redon, Pyrenees Mountains, Spain +35 Lake Superior +36 Lamborn +2 Lamjung, Nepal +30 Lancaster +127 Lao_People's_Democratic_Republic +2199 Laos +10 Laos, Poa village +12 Latitude +8365 Latvia +1 Latvia, Burtnieki +1 Latvia, Daugavpils +1 Latvia, Gulbene +3 Latvia, Jelgava +1 Latvia, Koceni +2 Latvia, Kocēni +1 Latvia, Kuldīga +1 Latvia, Nīca +1 Latvia, Rēzekne +3 Latvia, Tērvete +13 Lazarev Sea +4377 Lebanon +49 Lebanon, NH USA +2 Leci???ena, zaragoza +1 LeiYang,China +70 Leiden_NL +98 Lesotho +1 Lesser Antilles +1 Lettland +5 Liaoning, China +968 Liberia +1 Liberia;Between Liberia and Ivory Coast +362 Libya +1 Libyan Arab Jamahiriya +1923 Liechtenstein +3 Ligurian Sea +507 Lijiang +134 Line Islands +19 Lintong +4564 Lithuania +13 Lokkersnol, Eastern scheldt estuary, Netherlands +48 Loma Ridge +37 London, UK +4 Long Island Sound +2 Los Angeles, USA +5 Louisiana, USA +1 Lovers_Point_sand_after +1 Lovers_Point_sand_before +1 Lovers_Point_water +20 Lower Laguna Madre, TX +266 Luebeck, Germany +6 Lützow-Holm Bay +4265 Luxembourg +1 Lybia +2 MACEDONIA +120 MALAYSIA +150 MISSING +6 MIssing +107 MOLA-Mediterranean Sea +801 Macau +437 Macedonia +19059 Madagascar +1 Madagascar, Amoron'i Mania, Ambatofinandrahana +3 Madagascar, Amoron'i Mania, Ambositra +1 Madagascar, Amoron'i Mania, Ambositra, Ambatomarina +2 Madagascar, Amoron'i Mania, Ambositra, Ambohimilanja +1 Madagascar, Amoron'i Mania, Ambositra, Ambositra I +1 Madagascar, Amoron'i Mania, Ambositra, Ambositra II +1 Madagascar, Amoron'i Mania, Ambositra, Ambovombe +5 Madagascar, Amoron'i Mania, Ambositra, Andina +1 Madagascar, Amoron'i Mania, Ambositra, IlakaCentre +1 Madagascar, Amoron'i Mania, Ambositra, Ivato +1 Madagascar, Amoron'i Mania, Ambositra, Soavina +1 Madagascar, Amoron'i Mania, Ambositra, TalataVohimena +8 Madagascar, Amoron'i Mania, Ambositra, Tsarasaotra +1 Madagascar, Amoron'i Mania, Ambositra, Tsarasoatra +1 Madagascar, Amoron'i Mania, Fandriana +1 Madagascar, Amoron'i Mania, Manandriana, Ambovombe +1 Madagascar, Amoron'i Mania, Manandriana, Ambovombecentre +1 Madagascar, Amoron'i Mania, Manandriana, Talata Vohimena +1 Madagascar, Amoron'i Mania, Manandriana, Vinany Andakatanikel +1 Madagascar, Amoron'i Mania, Manandriana, VinanyAndakana +1 Madagascar, Haute Matsiatra, Ambohimahasoa, Vohiposa +1 Madagascar, Vakinankaratra, Antanifotsy +1 Madagascar;Ansirabe +1 Madagascar;Joffreville +5 Madrid, Spain +23 Madurai +121 Mae Sot, Thailand +1 Magadan Region +5 Maine, USA +1 Malaisia +25184 Malawi +111 Malawi;Malawi +1 Malaya +24069 Malaysia +304 Maldives +7548 Mali +726 Malta +7 Manatee pocket Florida +5 Manica, Mozambique +25 Manila +13 Manitoba (MB) +5 Manitoba, Canada +1 Manuka, Hawaii +1 Marão, Campeã, Portugal +5 Marathon, Greece +196 Marshall Islands +268 Martinique +5 Maryland, USA +434 Mauritania +3491 Mauritius +62 Mauritius;Mauritius +1346 Mayotte +3 McMurdo Dry Valleys of Antarctica +1 McMurdo Sound +6 Mediterannean Sea +2 Mediterranean +11031 Mediterranean Sea +13 Mediterranean Sea, Spain +8 Mediterranean, Spain +1 Melose +5 Mendoza, Argentina +9 Mersey estuary, at Eastham Sands, Liverpool, UK +1 Mexica +76372 Mexico +2 Mexico. Loreto Bay, Gulf of California. +1 Meyendel, the Netherlands +5 Michigan, USA +604 Micronesia +216 Micronesia, Federated States of +1 Mid-Atlantic ridge +1 Miers Valley, McMurdo Region, east Antarctica +1 Mindanao, Philippines +18 Minjiang River estuary +1 Minnesota, USA +2 MisSing +10507 Missing +75 Mississippi River +5 Missouri, USA +4976 Moldova +223 Monaco +3714 Mongolia +5 Montana, USA +27 Monte Buey. Cba. Argentina +731 Montenegro +5 Montevideo, Uruguay +4 Montgomery County, Pennsylvania +34 Montserrat +13 Morecambe Bay, UK +13 Morehead, KY +4566 Morocco +2 Moroco;Mediterranean Sea +5 Morondava, Madagascar +3 Moscow, Russia +5 Mount Apo, Philippines +8837 Mozambique +1 Mumbai +5 Muop Dang, Vietnam +12 Mwanza gulf population +1 Myanma +3830 Myanmar +1 N AdŽlie Cove , Antarctica +1 N-E Siberia, Indigirka R. +1 N-E Siberia, Novosibirsk Islands +10 N.A. +1 N.Ireland +2 N30.51 E21.23 +59 NCBS +1 NE Providence Channel +70 NIGERIA +148 NL +5 NLD +76 NOT APPLICABLE +82 NOT COLLECTED +1 NOT PROVIDED +1 NOT RECORDED +13 NOT applicable +49 NOT collected +1644 NULL +1 NULL (orig) +1 NUTM1 +27 NZ +419 Nabanhe +1 Nabeta Bay, Shimoda, Shizuoka +2 Nakhon Pathom, Thailand +1 Nakhonsitha province, Thailand +4961 Namibia +6 Namidia +1 Nanaimo +1 Narathiwat, Thailand +1 Nauru +1 Navassa Island +1 Near Rosendale NY [USA] +9 Nederland +14138 Nepal +1 Nepal, Kaski +6 Netherland +158716 Netherlands +281 Netherlands +2 Netherlands (Berghem) +6 Netherlands (Nijmegen) +355 Netherlands Antilles +2 Netherlands, +1 Netherlands, , groningen +11 Netherlands, Amersfoort +45 Netherlands, Groningen +2 Netherlands, Leeuwarden +16 Netherlands, Sittard +8 Netherlands, Utrecht +48 Netherlands;Netherlands +1 Netherlands;New Zealand +11 Nevado de Toluca +5 New Bruswick, Canada +3058 New Caledonia +1 New Caledonia;Noumea +4 New Guinea +3 New Haven, CT +5 New Mexico, USA +5 New South Wales, Australia +1 New York City +5 New York, USA +90402 New Zealand +1 New Zealand;Belgium +1 New_Zealand +8 Newry, Northern Ireland +4626 Nicaragua +1 Nigeira +3028 Niger +28610 Nigeria +1 Nigeria, Borno, Maiduguri +80 Nigeria, Ethiopia +1 Niigata +32 Norfolk Island +56 North Africa +7 North Atlantic +115 North Atlantic Ocean +10 North Carolina, USA +447 North Korea +25 North Lima, OH +149 North Macedonia +4 North Pacific +135 North Pacific Ocean +46 North Pacific Ocean Gyre +33 North Pacific Subtropical Gyre +9349 North Sea +13 North Sea, Netherlands +5 North Sulawesi, Indonesia +48 North Wales populations, Moelfre (53??? 21.283??? N, 04??? 13.896??? W) (Anglesey, UK) +15 North Yellow Sea +1 North-East Siberia, Lena Delta +18 North-Western Black Sea +6 Northern Baffin Bay +443 Northern Ireland +1 Northern Ireland;United Kingdom +3678 Northern Mariana Islands +76 Northern Pacific Ocean +1 Northwestern Pacific Ocean +91499 Norway +1 Norway, Akershus, Rykkinn +1 Norway, Akershus, Skui +1 Norway, Akershus, �s +1 Norway, Buskerud, Nesbyen +6 Norway, Gvarv river +2 Norway, Hedmark, Brumunddal +2 Norway, Kvisla ved Drevsjo +1 Norway, Nordland, Indre Kvar�y +1 Norway, Oppland, Lillehammer +2 Norway, Oppland, Snertingdal +1 Norway, Rogaland, Bjerkreim +7 Norway, Rogaland, Bryne +3 Norway, Rogaland, Fister +1 Norway, Rogaland, Fogn +1 Norway, Rogaland, Hjelmeland +1 Norway, Rogaland, Karmsund +6 Norway, Rogaland, Rennes�y +2 Norway, Rogaland, Undheim +2 Norway, Rogaland, �lg�rd +1 Norway, Telemark, Vr�liosen +1 Norway, Troms, Tromsdalen +1 Norwegian Sea +4258 Not Applicable +5135 Not Collected +253 Not Provided +33 Not Recorded +23386 Not applicable +2 Not applicable;USA +2431 Not collected +334 Not provided +3 Not recorded +2 Nottigham, England +1 Nova Scotia, Canada +8 Novosibirsk +3 Novosibirsk, Russia +1 Oahu, Hawaii +12 Oceania +4 Ocsa, Hungary +1 Off to Concepcion, Chili +2 Offshore of Tennou, Akita +10 Offshore of Tennou, Akita Japan +32 Okhotsk Sea +88 Okhotsk Sea, Japan +2374 Oman +5 Ontario, Canada +1 Oregon +4 Oregon state, USA +1 Orkney Islands +2 OrkneyIslands +4 Orrios, Teruel +7 Osaka university animal facility +1 Osorno, Chile +1 Oudomxay, Laos +29 PN-New Zealand +1 POL +1 Pabna, Bangladesh +21 Pacific +83554 Pacific Ocean +1 Pacific coast, US +4 Padova, Italy +91 Pailin, Cambodia +11329 Pakistan +1 Pakistan, North-West Frontier +1 Pakistan, Northern Areas +1 Pakistan, Punjab +5 Palampur, India +1205 Palau +42 Palmyra Atoll +17277 Panama +1 Panama, Darien, Cana +4 Panama, Gamboa +3 Pangasinan province, Philippines +5 Pantelleria island Mediterranean Sea +9864 Papua New Guinea +18 PapuaNewGuinea +1446 Paracel Islands +1547 Paraguay +1 Parco del Monte Subasio, Italy +3 Paris, France +1 Paul Boquilobo, Portugal +4 Pechhof, Germany +1 Peeples_Valley,_AZ +7 Peninsular Malaysia +22 Pensecola, FL, USA +2 Perdido Pass +27 Pergamino. Bs. As. Argentina +31886 Peru +25 Peru-Matses +31 Peru-Tunapuco +24 Peru;Peru +3 Petit Bois Island +5 Phetchabun, Thailand +11451 Philippines +57 Philippines_Indonesia_Admixed +3 Phillip Island, Australia +1 Phillipines +1 Phisnulok, Thailand +1 Phnom Penh, Cambodia +2 Pitcairn Islands +41442 Poland +16 Poland/Hungary +13 Polar Antarctic Province +1 Polen +1 Poolepynten, Svalbard +21 Port Kenny SA +4 Port Vila, Vanuatu +2 Portage BržlŽ, Canada +1 Portage BržlŽ, Canada +1 Porto Rico +2 Portofino Promontory Mediterranean Sea +82134 Portugal +1 Possession Island, Crozet Archipelago +116 Preah Vihear, Cambodia +5 Pretoria, South Africa +2 Prince Edward Island, Canada +3 Pt Loma San Diego +8211 Puerto Rico +169 Puerto Rico (USA) +202 Puerto Rico;Puerto Rico +130 Puerto Rico;USA +4 PuertoRico +291 PuertoRico;Puerto Rico +1 Punto Gaspareno, near Cabo San Lucas, Baja California, Mexico GPS (23°10'58.09"N, 110° 8'26.51"W) +103 Pursat, Cambodia +5505 Qatar +19 Qinghai-Tibetan Plateau +1 Quang Binh, Vietnam +1 Quanzhou,China +24 Quebec City;Canada;Canada +5 Quebec, Canada +8 R. decussatus sampled in Ria Formosa +177 RSA +5 Rahuri, India +1 Rajasthan, India +1 Rajkot city +53 Ramu, Bangladesh +5 Rangoon, Myanmar +21 Ranong, Thailand +106 Rattanakiri, Cambodia +2 Rauhala, South-West Finland +7 Raunefjorden +5 Recife, Brazil +1 Red Rocks Lake, Boulder, Colorado USA +63 Red Sea +24 Red Sea coral reef +1 Red sea coast line, Saudi Arabia +4 Reims, Marne, France +8 Reinshof +26 Rep. Georgia +99 Republic of Armenia +1 Republic of Congo +24 Republic of Ireland +48 Republic of Korea +1207 Republic of the Congo +30 Restricted access +2530 Reunion +1 Rhodope Mountains, Bulgaria +3 Rifle DOE IFRC, Rifle Colorado +3 Rikaze, Tibet, China +1 Rissoa +1 Riverside, California +1 Roi Et, Thailand +8216 Romania +1 Romania, , +5 Romita, Mexico +1 Roosendaal, De Moeren, the Netherlands +15 Rosa Morada, Nevado de Toluca, Estado de Mexico, Mexico +110 Ross Sea +3 Roth, Germany +53537 Russia +2 Russia(Caucasus) +1 Russia, Kemerovo +2 Russia, Moscow +30 Russian Federation +2578 Rwanda +96 S.K.Nagar Dantiwada +1 SOMLIT Estacade, Roscoff, France +2 SOMLIT, Astan, Roscoff, France +1 SPAIN (orig) +21 Saba Island Region +20 Sabine Lake, TX +2 Sabino_Canyon,_AZ +4 Saclay, Essone, France +2 Saint Barthelemy +110 Saint Helena +295 Saint Kitts and Nevis +101 Saint Lucia +15 Saint Martin +3 Saint Martin, Dutch Caribbean +1 Saint Pierre and Miquelon +108 Saint Vincent and the Grenadines +1 Sakon, Thailand +1 Saldanha Bay +220 Salinas Valley +1 Saline di Torre Colimena (Taranto) +27 Salt Lake City UT +18 Saltwater of Pearl Estuary +961 Samoa +2 Sampled from Inner Cardigan Bay, Irish sea +2 Sampled from Lundy, Bristol Channel +3 Sampled from North Cardigan Bay, Irish sea +2 Sampled from Red Wharf Bay, Irish Sea +4 Sampled from Red Wharf Bay, Irish sea +1 Sampled from South Cardigan Bay, Irish Sea +7 Sampled from South Cardigan Bay, Irish sea +9 Sampled from St Bee's Head, Irish sea +200 San Antonio TX +2 San Bernardino Mountains, CA +1 San Francisco Bay Area, CA +2 San Marino +2 San_Carlos,_AZ +27 Sandy Beach Park +1 Sangchon food Corporation (Yongin-si, Kyunggi-do, Republic of korea) +1 Sankt Gallen, Eastern Switzerland +5 Santa Maria, Brazil +703 Sao Tome and Principe +5 Sapporo, Japan +1 Sardinia +2 Sardinia, Italy +14 Sargasso Sea +491 Sasayama +35 Saskatchewan (SK) +5 Saskatchewan, Canada +25968 Saudi Arabia +3 Saudi Arabia;Saudi Arabia +1 Saudi Arabia;United Kingdom +4 Sauwandarek lake, Papua, Indonesia +1 Savoonga, AK +1 Schweden +77 Schweiz +55 Scotland +7 Scotland, UK +5 Seattle, USA +1 Seattle, WA +1 Sedziejowice, Poland +1 Semfote, Cambodia +6390 Senegal +2587 Serbia +6 Serbia and Montenegro +24 SeropŽdica, RJ +2563 Seychelles +1 Seychelles;Cousin Island +1 ShanTou,China +5 Shandong, China +7 Shanghai +13 Shanghai, China +4 Shantou,China +235 Shenzhen +7 Shishou City, Hubei Province, China +8 Shoreham Harbour, Dredger Berth +2 Shoreham Harbour, estuary outside harbour +2 Shoreham Harbour, main channel +82 Shwe Kyin, Myanmar +9 Siberia +2 Sichuan,China +2554 Sierra Leone +2 Sierra Nevada, CA +2 SierraLeone +21 Sierra_Leone +58367 Singapore +27 Singapore;Singapore +2 Singida, Tanzania +5 Sint Maarten +27 Sisakhet, Thailand +57 Skarholmen, Uppsala (Sweden) +48864 Slovakia +14802 Slovenia +1 Solapur,Maharashtra,India +746 Solomon Islands +1 Solomon_Islands +146 Somalia +4 Sør Rondane Mountains +48 Sourth America;Restricted access +2 South Adriatic Sea +99162 South Africa +170 South Africa patient blood +700 South Africa, Eastern Cape +7 South Africa, Eastern Cape, Queenstown +7 South Africa, Eastern cape +345 South Africa, Free State +2 South Africa, Free State, Bloemfontein +7 South Africa, Free state +2376 South Africa, Gauteng +798 South Africa, KwaZulu-Natal +1 South Africa, KwaZulu-Natal, Vryheid +207 South Africa, Limpopo +2 South Africa, Limpopo, Mopani, Tzaneen-Mopani +174 South Africa, Mpumalanga +278 South Africa, North West +74 South Africa, Northern Cape +15 South Africa, Orange Free State +1760 South Africa, Western Cape +1 South Africa, Western Cape, Dunoon +5 South Africa, Western cape +524 South America;Restricted access +13 South Atlantic Ocean +5 South Australia, Australia +8 South China +12 South China Sea +11 South Georgia +843 South Georgia and the South Sandwich Islands +77747 South Korea +6 South Orkneys +60 South Pacific Ocean +249 South Sudan +16 South Yellow Sea +12 South-Eastern Black Sea +4 South-West Germany +2 SouthAfrica +5 Southeast Alaska +1 Southeast Asia +52 Southeast of France +220 Southern Africa +39 Southern Bay of Biscay +1 Southern California coast, Pacific Ocean +1 Southern Kattegat, Buoy St. +4 Southern Mariana Trough +5909 Southern Ocean +5 Southern Ocean Polar Front +23 Southwest of France +250381 Spain +1 Spain, Asturias +1 Spain, Asturias, Caleao +1 Spain, Asturias, Morcín +1 Spain, Asturias, Tineo +2 Spain/France +4 Spain;Atlantic Ocean +13 Spain;Mediterranean Sea +135 Spain;Spain +8 Spitsbergen, Norway +18 Spitsbergen, Svalbard +461 Spratly Islands +3726 Sri Lanka +55 Sri_Lanka +1 St 1 +2 St 22 +1 St 23 +1 St 24 +1 St 26 +1 St 33 +1 St 35 +1 St 37 +4 St 38 +1 St 4 +1 St 42 +1 St 43 +2 St 45 +1 St 54 +1 St 55 +1 St 57 +1 St 7 +16 St. Cloud, FL +4 St. George Island, FL, USA +218 Stadt Gottingen +185 State of Palestine +17 Station ALOHA North Pacific Subtropical Gyre +1 Station Roscoff Astan +2 Storegga seep enrichment +4 Storrs, CT +6 Storrs, Connecticut +3 Strait of Georgia +2391 Sudan +697 Sugadaira +20 Superior, Wisconsin +9 Surinam +303 Suriname +6504 Svalbard +118 Swaziland +148831 Sweden +202 Sweden [GAZ +1 Sweden, Blekinge l�n +1 Sweden, Dalarna +1 Sweden, Dalarna, Långsjöberget +2 Sweden, Dalarnas l�n +2 Sweden, Gotlands l�n +1 Sweden, J�nk�pings l�n +1 Sweden, Kronobergs l�n, +2 Sweden, Lake Erken +1276 Sweden, NA, NA +2 Sweden, NA, Orebro +2 Sweden, Orebro +2 Sweden, Sk�ne l�n +280 Sweden, Stockholm +2 Sweden, S�dermanlands l�n +5 Sweden, Uppsala +1 Sweden, V�stra G�talands l�n +2 Sweden, �rebro l�n +3 Sweden, �sterg�tlands l�n +1 Sweden;Saudi Arabia +1 Sweden;United Kingdom +274409 Switzerland +1 Switzerland, , +1 Switzerland, Chur-Calandahütte +1 Sylt, Germany +1 Synthetic mixture of 18 yeast/bacteria/archaeal species +1134 Syria +17 Syrian Arab Republic +46 TUNISIA +4 Tahiti (French Polynesia) +1 Tailand +2 Taimyr Peninsula +2 Tainan, Taiwan,China +40469 Taiwan +6 Taiwan, China +1 Taiwan;Chia-i +1 Taiwan;Yun Shui +511 Tajikistan +10 Tamil Nadu, India +1 Tanahun, Nepal +1 Tanganyika +104715 Tanzania +18 Taoyuan0 +18 Taoyuan1 +522 Tasman Sea +1 Tasmania +5 Tasmania, Australia +2 Tavolara island Mediterranean Sea +2 Tbilisi, Georgia +1 Tchad +32 Temperate Northern Atlantic +19 Tenerife +1 Tennessee, USA +2 Terra Nova Bay +693 Teshio +5 Texas, USA +29 Texcoco, Estado de Mexico, Mexico +45144 Thailand +1 Thailand, Bangkok, Bangkok +1 The 4 forest class 2 class 2-class (26°50′ N, 117°54′ E) of the Daoping work area of the Yang Kou Forest Farm, Fujian Province, China +118 The Bahamas +180 The Gambia +1 The Mariana Trench, western Pacific Ocean +389 The Netherlands +36 The former Yugoslav Republic of Macedonia +110 The western North Pacific south of Japan +297 Tianjin, China +1 Tianmu Mountain, Zhejiang Province, China +2 Tibet +1 Timor Sea +119 Timor-Leste +11 Tlaloc +619 Togo +3 Tokelau +1 Tokyo +606 Tomakomai +2160 Tonga +1 Tortolita_Mtns.,_AZ +1 Trinidad +2659 Trinidad and Tobago +17 Trinidad&Tobago +1 Tripura, India +96 Trois-Sauts (French Guiana) +3 Tromelin Island +1 Tschechien +33 Tucson, AZ +2 Tucson,_AZ +447 Tuebingen, Germany +5 Tulcan, Ecuador +4596 Tunisia +2 Tunisia;Mediterranean Sea +2 Turkemenistan +16289 Turkey +1 Turkey, NW, Bursa +8 Turkey;Mediterranean Sea +293 Turkmenistan +185 Turks and Caicos Islands +8 Tuvalu +9 Tyne estuary at Howdon, Tyne and Wear, UK +2 Tyrrenian Sea +2 Tyrrhenian Sea +1 U.S.A;USA +152 UAE +41 UCSD +5 UG;Uganda +87 UGANDA +4289 UK +6 UK (Leeds) +1 UK (Manchester) +34 UK patient blood +16 UK, London +1 UK;Canada +1 UK;Ireland +1 UK;Sweden +2 UK;USA +215 UK;United Kingdom +29 UNITED STATES +5 UNK +857 US +6900903 USA +23 USA (orig) +89 USA territory +6 USA, AK, Douglas +25 USA, AK, Juneau +2 USA, Alaska, Fairbanks +1 USA, San Francisco +1 USA, Tulsa +1 USA;Australia +1 USA;Auwahi;Maui +1 USA;Catalina Island;California +4 USA;Malawi +1 USA;Mount St. Helena;California +1 USA;Netherlands +8273 USA;USA +197 USA;United States of America +2 USA;Wolfskill Orchand;Winters;California +4 USDA-ARS, Beltsville, MD +646 USSR +39973 Uganda +5172 Ukraine +1 Ukraine, Unknown, Unknown +2 Union_of_Soviet_Socialist_Republics_(Former) +4653 United Arab Emirates +12 United Arab Emirates, Dubai +1 United Kindgom, England, Priest Pot, Cumbria +1 United Kindom +3964028 United Kingdom +56 United Kingdom (England, Wales & N. Ireland) +7 United Kingdom (Scotland) +13 United Kingdom (UK) +2 United Kingdom (UK), Scotland +525 United Kingdom of Great Britain and Northern Ireland +4 United Kingdom, England +18 United Kingdom, England, Southampton +64 United Kingdom, England, Woodchester +1 United Kingdom, Hampshire +29 United Kingdom, Northern Ireland +83 United Kingdom, Scotland +2274 United States +2 United States (captive) +7 United States Minor Outlying Islands +391 United States of America +21 United States of America of America +10 United States of America;USA +13 United States, California +28 United States, Georgia +1 United States, Indiana +10 United states of america +120 United-Kingdom +50 United_States_of_America +1 Unites_States_of_America +1 University Park, PA USA +5 Upolu, Samoa +1 Urugay +3087 Uruguay +8 Utah, USA +3 Utica, IL +4 Uttar Pradesh, India +701 Uzbekistan +102 Valencia +38 Valencia (Spain) +14 Valencia, Spain +5 Vancouver Island, North Pacific +5 Vancouver, Canada +2331 Vanuatu +5 Vauxhaul, Alberta, Canada +1 Velike Lasce, Kobila hill, Slovenia +21 Veluwe +4329 Venezuela +1 Verona +27 Viale. E. Ríos Argentina +5 Vientiane, Laos +28155 Viet Nam +56 Viet_Nam +12 Vietman +578 Vietnam +128 Vietnam;Viet Nam +6 Villamayor, Zaragoza +2 Villanueva de Gallego, zaragoza +1516 Virgin Islands +5 Vladivostok, Russia +5 Volgograd, Russia +2 W. Africa +9 WHO Reference Center +1 Wageningen +2 Wales +3 Wales, Carmarthenshire +1 Wales, Ceredigion +3 Wales, North West Wales +5 Wales, Pembrokeshire +1 Wales, Powys +3 Wales, South Wales +490 Wallis and Futuna +5 Washington National Primate Research Center Tissue Distribution Program +3 Washington State University +2 Washington-USA +19 Weinan +1 West Africa +695 West Bank +4 West Bengal, India +1 West Bengal,India +5 West Cornwall, England +5 West Java, Indonesia +5 West Kalimantan, Indonesia +1 West Siberia, North, Gydan Peninsula +2 West_Africa +5 Western Australia, Australia +5 Western English Channel +6 Western Sahara +2 Western Sahara (Morocco) +2 White Oak River +1 White Sea +20 Wilmington, NC +1 Winnipeg [Canada] +1 Wissenkerke, Keihoogteweg, the Netherlands +99 Xi'an +14 Xianyang +2 Xinhui,China +1 Xinjiang +5 Xinjiang, China +178 YRI +23 Yadkin River Riparian Zone +737 Yakushidake +718 Yakushima +4 Yamanashi-ken, Japan +1 Yangshuo,China +2 Yaound +9 Yatir, Israel +39 Yellowstone National Park +591 Yemen +1 Yenisei river transsect 1 left bank +1 Yenisei river transsect 1 mainstream +1 Yenisei river transsect 1 right bank +1 Yenisei river transsect 10 left bank +1 Yenisei river transsect 10 mainstream +1 Yenisei river transsect 10 right bank +1 Yenisei river transsect 2 left bank +1 Yenisei river transsect 2 mainstream +1 Yenisei river transsect 2 right bank +1 Yenisei river transsect 3 left bank +1 Yenisei river transsect 3 mainstream +1 Yenisei river transsect 3 right bank +1 Yenisei river transsect 4 left bank +1 Yenisei river transsect 4 mainstream +1 Yenisei river transsect 4 right bank +1 Yenisei river transsect 5 left bank +1 Yenisei river transsect 5 mainstream +1 Yenisei river transsect 5 right bank +1 Yenisei river transsect 6 left bank +1 Yenisei river transsect 6 mainstream +1 Yenisei river transsect 6 right bank +1 Yenisei river transsect 7 left bank +1 Yenisei river transsect 7 mainstream +1 Yenisei river transsect 7 right bank +1 Yenisei river transsect 8 left bank +1 Yenisei river transsect 8 mainstream +1 Yenisei river transsect 8 right bank +1 Yenisei river transsect 9 left bank +1 Yenisei river transsect 9 mainstream +1 Yenisei river transsect 9 right bank +128 Yingtan Red Soil Ecology Experimental Station +23 Yokohama_Japan +670 Yona +724 Yoshidayama +2 Youngs Bay +636 Yugoslavia +1 Yuma,_Co,_AZ +1 Yunnan +5 Yunnan, China +2 Yunnan,China +170 ZM;Zambia +136 Zaire +5200 Zambia +1 Zambia, Central, Lusaka +16 Zambia, Lusaka +31 Zambia, Ndola +1 Zambia1 +1 Zambia2 +5 Zewai, Ethiopia +4664 Zimbabwe +1 Zimbabwe, Harare +1 Zimbabwe, Manicaland +1 Zimbabwe, Mashonaland East +2 Zimbabwe, Mashonaland West +2 Zimbabwe, Masvingo +2 Zimbabwe, Matabeleland South +281 Zimbabwe;Zimbabwe +12 _no_info +6 aus;Australia +3 can;Canada +1 carbon-fixing bacteria +1 country +1 cyprus +1 dd +1 dongbei +10 fjord;Svalbard;southwest Spitsbergen +1 freshwater reservoir +424 guangzhou,china +1 hanford H-100 +12 hospital +1 http +1 illumina +11 italy +9 kOREA +1 kirkman +188 korea +1 laboratory +1 latitude = +27.94 & longitude = -114.06 [Pacific Ocean +133 lung cancer panel +1617510 missing +1 missing value +2 misssing +29 mix of water near Warnemuende (Baltic Sea), Germany & Kalix Water Svartbyn, Sweden +3 morocco +1 nanjing +5 nd +8 near Bayreuth, Germany (49??58'16'' N, 11??34'51'' E and 460 m alt.) +4 negative control +1 net;Netherlands +2 no +1 no_data +4 non +6 norh East China Sea +13 north pole;Arctic Ocean +6 north pole;Caribbean Sea +6 north pole;Pacific Ocean +6 northwestern Lake Huron +112 not appicable +38 not available +1 not available, , Cologne +9 not collected +98 not provided, Bangkok, Bangkok +133 not provided, Cologne +3 not provided, NA, NA +1932 not provided, Not provided, Not provided +73 not provided, Tübingen +2 not provided, US, NA +343 not provided, Unknown, Unknown +7 not recorded +1 on Dana Fork, Yosemite National Park +1 open Mediterranean Sea +30 pacific ocean gyre +698 sandiego +1 sea fungi +1 southern East China Sea +2 subtropical western North Pacific +1 suburb of Beijing +1 sunset +1 sweden +2 texas gulf coast +2 the Arctic Ocean +1 the Netherland +15 the Netherlands +1 unclear +1 undefine +48 undefined +1 unisankyo +2 unk +1 unknown, +1 unkown +36 usa;United States of America +1 zhangjiajie +1 {China} diff --git a/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt.xlsx b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt.xlsx new file mode 100644 index 0000000..14008a5 Binary files /dev/null and b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/ENA_samples_by_country_20240704.txt.xlsx differ diff --git a/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/INSDC Countries + Geography.xlsx b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/INSDC Countries + Geography.xlsx new file mode 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a/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/geography_biology_SamWorkExperience_presentation.pptx b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/geography_biology_SamWorkExperience_presentation.pptx new file mode 100644 index 0000000..5d520fd Binary files /dev/null and b/ena-content-annotations/docs/Sam_WorkExperiment_Geography_Biology_2024/geography_biology_SamWorkExperience_presentation.pptx differ diff --git a/ena-content-annotations/source/XLSX_sheets_to_tsv.pl b/ena-content-annotations/source/XLSX_sheets_to_tsv.pl new file mode 100755 index 0000000..7455ab6 --- /dev/null +++ b/ena-content-annotations/source/XLSX_sheets_to_tsv.pl @@ -0,0 +1,65 @@ +#!/usr/bin/env python3 +"""Script of XLSX_sheets_to_tsv.pl is to convert sheets of XLSX to tsv + +___author___ = "woollard@ebi.ac.uk" +___start_date___ = 2024-10-31 +__docformat___ = 'reStructuredText' + +""" + + +import logging +logger = logging.getLogger(__name__) +import argparse +import pandas as pd +import os + +def read_excel(infile): + """""" + logger.debug(f"infile={infile}") + try: + #df = pd.read_excel(infile) + sheets_dict = pd.read_excel(infile, sheet_name=None) + #sheet_keys = df.keys() + #print(sheet_keys) + except Exception as e: + print(f"An unexpected error occurred: {e}") + + # save each DataFrame to a variable dynamically if needed + sheet_dataframes = {sheet_name: df for sheet_name, df in sheets_dict.items()} + logger.debug(sheet_dataframes.keys()) + + directories = os.path.dirname(infile) + + for sheet in sheet_dataframes: + logger.info(sheet) + df = sheet_dataframes[sheet] + print(df.head(5).to_markdown(index=False)) + outfile_name = directories + "/" + sheet.replace(" ", "_") + ".tsv" + logger.debug(f"{outfile_name}") + df.to_csv(outfile_name, sep="\t", index=False) + logger.info(f"created: {outfile_name}") + + + + + + +def main(): + read_excel(args.file) + +if __name__ == '__main__': + logging.basicConfig(level = logging.DEBUG, format = '%(levelname)s - %(message)s') + parser = argparse.ArgumentParser( + prog='XLSX_sheets_to_tsv.pl', + description='convert sheets of XLSX to tsv', + epilog='') + parser.add_argument("-f", "--file", help="XLSX file to convert") + args = parser.parse_args() + if args.file: + logger.debug(f"args.file selected value={args.file}") + main() + else: + parser.print_help() + +