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Description
Error:
java -jar ./webin-cli-8.2.0.jar ... -context genome -manifest assembly_manifest.txt -validate
WARNING: A restricted method in java.lang.System has been called
WARNING: java.lang.System::loadLibrary has been called by org.fusesource.hawtjni.runtime.Library in an unnamed module (jar:file:/Users/devegaj/analysis/tully-assembly/ENA/webin-cli-8.2.0.jar!/BOOT-INF/lib/jansi-1.18.jar!/)
WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
WARNING: Restricted methods will be blocked in a future release unless native access is enabled
INFO : Your application version is 8.2.0
ERROR: Unknown field: AGP.
It looks like the support for AGP files has been removed. What's the option to submit an isolated genome assembly where chromosome anchoring is based on synteny?
Thanks