conda-forge on top

Author: mvdbeek

.travis.yml

@@ -16,6 +16,9 @@ install:
   - pip install flake8 planemo
   - planemo conda_init
   - $PLANEMO_CONDA_PREFIX/bin/conda update -y conda
+  - $PLANEMO_CONDA_PREFIX/bin/conda config --get channels # verify conda-forge is not highest priority
+  - $PLANEMO_CONDA_PREFIX/bin/conda config --add channels conda-forge  # moves conda-forge to the top
+  - $PLANEMO_CONDA_PREFIX/bin/conda config --get channels # now conda-forge should be highest priority
   - $PLANEMO_CONDA_PREFIX/bin/conda create -y -q -c bioconda --name iuc_conda samtools=0.1.19 bcftools
   - . $PLANEMO_CONDA_PREFIX/bin/activate iuc_conda
   - planemo --version