n (100x larger) to get reasonable results.
Leveraging Existing Code¶
@@ -122,7 +122,7 @@Leveraging Existing CodeI with respect to each of these parameters
— ![[dI/dp_0, dI/dp_1, ...]](_images/math/826eb1603997b91edc64a24e1700a40d03109a8f.svg)
— again
evaluated with their mean values.
-The integral I (with the parameters replaced by their mean values )
+
The integral I (with the parameters replaced by their mean values)
can be evaluated using standard routines as no gvar.GVars are involved.
The derivatives with respect to the endpoints are also easily evaluated:
diff --git a/doc/html/gvar.html b/doc/html/gvar.html
index 90f043f..835e65f 100644
--- a/doc/html/gvar.html
+++ b/doc/html/gvar.html
@@ -3094,25 +3094,13 @@ PDF-related Objects
g – gvar.GVar or array of gvar.GVars, or dictionary of gvar.GVars
or arrays of gvar.GVars.
svdcut (float or None) – If nonzero, singularities in the correlation
+
svdcut (float) – If nonzero, singularities in the correlation
matrix are regulated using gvar.regulate()
with an SVD cutoff svdcut. Default is svdcut=1e-12.
eps (non-negative float) – If positive, singularities in the correlation matrix
for g are regulated using gvar.regulate()
with cutoff eps. Ignored if svdcut is specified (and
not None).
svdcut – If not None, replace
-covariance matrix of g with a new matrix whose
-small eigenvalues are modified: eigenvalues smaller than
-svdcut times the maximum eigenvalue eig_max are
-replaced by svdcut*eig_max. This can ameliorate
-problems caused by roundoff errors when inverting the
-covariance matrix. It increases the uncertainty associated
-with the modified eigenvalues and so is conservative.
-Setting svdcut=None or svdcut=0 leaves the
-covariance matrix unchanged. If svdcut is negative
-eigenmodes with eigenvalues smaller than |svdcut|*eig_max
-are discarded. Default is 1e-12.
noise (bool) – If True adds noise to the corrections caused by
svdcut/eps (see documentation for gvar.regulate()).
Default value is False.
PDF-related Objects
- Parameters:
-chiv – An array of values for 
+
chiv – An array of values for 
evaluate a point p in paramter space. In batch
mode the array has an extra batch index,
either on the right (mode='rbatch') or on the l
diff --git a/doc/html/searchindex.js b/doc/html/searchindex.js
index ae8acd5..4bb9892 100644
--- a/doc/html/searchindex.js
+++ b/doc/html/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["case-integral", "case-pendulum", "case-svdcut", "gvar", "gvar_dataset", "gvar_other", "index", "overview"], "filenames": ["case-integral.rst", "case-pendulum.rst", "case-svdcut.rst", "gvar.rst", "gvar_dataset.rst", "gvar_other.rst", "index.rst", "overview.rst"], "titles": ["Case Study: Creating an Integrator", "Case Study: Numerical Analysis \u2014 Pendulum Clock", "Case Study: Correlations and SVD Cuts", "gvar - Gaussian Random Variables", "gvar.dataset - Random Data Sets", "Numerical Analysis Modules in gvar", "gvar Documentation", "Overview and Tutorial"], "terms": {"gvar": [0, 1, 2], "thi": [0, 1, 2, 3, 4, 5, 7], "illustr": [0, 1, 2, 3, 5, 7], "how": [0, 1, 2, 3, 4, 5, 7], "mix": [1, 3, 7], "s": [0, 1, 2, 3, 4, 5, 6, 7], "routin": [0, 1, 3, 5, 7], "integr": [1, 3, 6, 7], "differenti": [1, 6, 7], "equat": [1, 6], "od": [0, 1, 5], "root": [1, 6, 7], "function": [0, 1, 2, 6], "It": [0, 1, 2, 3, 4, 5, 7], "also": [0, 1, 3, 4, 5, 7], "give": [0, 1, 2, 3, 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diff --git a/tests/test_gvar.py b/tests/test_gvar.py
index 8be6f6d..3b51a82 100644
--- a/tests/test_gvar.py
+++ b/tests/test_gvar.py
@@ -2898,7 +2898,7 @@ def _distribute_gvars(self, gvlist):
yaml = None
def olddump(g, outputfile, method='pickle', use_json=False):
- """ Serialize a collection ``g`` of |GVar|\s into file ``outputfile``.
+ """ Serialize a collection ``g`` of |GVar| objects into file ``outputfile``.
Old verion, here for testing purposes only.
I (with the parameters replaced by their mean values )
+I (with the parameters replaced by their mean values)
can be evaluated using standard routines as no gvar.GVars are involved.
The derivatives with respect to the endpoints are also easily evaluated:PDF-related Objects
g – gvar.GVar or array of gvar.GVars, or dictionary of gvar.GVars
or arrays of gvar.GVars.
svdcut (float or None) – If nonzero, singularities in the correlation
+
svdcut (float) – If nonzero, singularities in the correlation
matrix are regulated using gvar.regulate()
with an SVD cutoff svdcut. Default is svdcut=1e-12.
eps (non-negative float) – If positive, singularities in the correlation matrix
for g are regulated using gvar.regulate()
with cutoff eps. Ignored if svdcut is specified (and
not None).
svdcut – If not None, replace
-covariance matrix of g with a new matrix whose
-small eigenvalues are modified: eigenvalues smaller than
-svdcut times the maximum eigenvalue eig_max are
-replaced by svdcut*eig_max. This can ameliorate
-problems caused by roundoff errors when inverting the
-covariance matrix. It increases the uncertainty associated
-with the modified eigenvalues and so is conservative.
-Setting svdcut=None or svdcut=0 leaves the
-covariance matrix unchanged. If svdcut is negative
-eigenmodes with eigenvalues smaller than |svdcut|*eig_max
-are discarded. Default is 1e-12.
noise (bool) – If True adds noise to the corrections caused by
svdcut/eps (see documentation for gvar.regulate()).
Default value is False.
PDF-related Objects
- Parameters:
-chiv – An array of values for
+
chiv – An array of values for
evaluate a point p in paramter space. In batch
mode the array has an extra batch index,
either on the right (mode='rbatch') or on the l
diff --git a/doc/html/searchindex.js b/doc/html/searchindex.js
index ae8acd5..4bb9892 100644
--- a/doc/html/searchindex.js
+++ b/doc/html/searchindex.js
@@ -1 +1 @@
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diff --git a/tests/test_gvar.py b/tests/test_gvar.py
index 8be6f6d..3b51a82 100644
--- a/tests/test_gvar.py
+++ b/tests/test_gvar.py
@@ -2898,7 +2898,7 @@ def _distribute_gvars(self, gvlist):
yaml = None
def olddump(g, outputfile, method='pickle', use_json=False):
- """ Serialize a collection ``g`` of |GVar|\s into file ``outputfile``.
+ """ Serialize a collection ``g`` of |GVar| objects into file ``outputfile``.
Old verion, here for testing purposes only.
g – gvar.GVar or array of gvar.GVars, or dictionary of gvar.GVars
or arrays of gvar.GVars.
svdcut (float or None) – If nonzero, singularities in the correlation +
svdcut (float) – If nonzero, singularities in the correlation
matrix are regulated using gvar.regulate()
with an SVD cutoff svdcut. Default is svdcut=1e-12.
eps (non-negative float) – If positive, singularities in the correlation matrix
for g are regulated using gvar.regulate()
with cutoff eps. Ignored if svdcut is specified (and
not None).
svdcut – If not None, replace
-covariance matrix of g with a new matrix whose
-small eigenvalues are modified: eigenvalues smaller than
-svdcut times the maximum eigenvalue eig_max are
-replaced by svdcut*eig_max. This can ameliorate
-problems caused by roundoff errors when inverting the
-covariance matrix. It increases the uncertainty associated
-with the modified eigenvalues and so is conservative.
-Setting svdcut=None or svdcut=0 leaves the
-covariance matrix unchanged. If svdcut is negative
-eigenmodes with eigenvalues smaller than |svdcut|*eig_max
-are discarded. Default is 1e-12.
noise (bool) – If True adds noise to the corrections caused by
svdcut/eps (see documentation for gvar.regulate()).
Default value is False.
PDF-related Objects
- Parameters:
-chiv – An array of values for
+
chiv – An array of values for
evaluate a point p in paramter space. In batch
mode the array has an extra batch index,
either on the right (mode='rbatch') or on the l
diff --git a/doc/html/searchindex.js b/doc/html/searchindex.js
index ae8acd5..4bb9892 100644
--- a/doc/html/searchindex.js
+++ b/doc/html/searchindex.js
@@ -1 +1 @@
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diff --git a/tests/test_gvar.py b/tests/test_gvar.py
index 8be6f6d..3b51a82 100644
--- a/tests/test_gvar.py
+++ b/tests/test_gvar.py
@@ -2898,7 +2898,7 @@ def _distribute_gvars(self, gvlist):
yaml = None
def olddump(g, outputfile, method='pickle', use_json=False):
- """ Serialize a collection ``g`` of |GVar|\s into file ``outputfile``.
+ """ Serialize a collection ``g`` of |GVar| objects into file ``outputfile``.
Old verion, here for testing purposes only.
-
-
chiv – An array of values for
+chiv – An array of values for
evaluate a point pin paramter space. In batch mode the array has an extra batch index, either on the right (mode='rbatch') or on the l diff --git a/doc/html/searchindex.js b/doc/html/searchindex.js index ae8acd5..4bb9892 100644 --- a/doc/html/searchindex.js +++ b/doc/html/searchindex.js @@ -1 +1 @@ -Search.setIndex({"docnames": ["case-integral", "case-pendulum", "case-svdcut", "gvar", "gvar_dataset", "gvar_other", "index", "overview"], "filenames": ["case-integral.rst", "case-pendulum.rst", "case-svdcut.rst", "gvar.rst", "gvar_dataset.rst", "gvar_other.rst", "index.rst", "overview.rst"], "titles": ["Case Study: Creating an Integrator", "Case Study: Numerical Analysis \u2014 Pendulum Clock", "Case Study: Correlations and SVD Cuts", "gvar- Gaussian Random Variables", "gvar.dataset- Random Data Sets", "Numerical Analysis Modules ingvar", "gvar Documentation", "Overview and Tutorial"], "terms": {"gvar": [0, 1, 2], "thi": [0, 1, 2, 3, 4, 5, 7], "illustr": [0, 1, 2, 3, 5, 7], "how": [0, 1, 2, 3, 4, 5, 7], "mix": [1, 3, 7], "s": 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method='pickle', use_json=False): - """ Serialize a collection ``g`` of |GVar|\s into file ``outputfile``. + """ Serialize a collection ``g`` of |GVar| objects into file ``outputfile``. Old verion, here for testing purposes only.