Bump dependencies

Gemspec and Ruby update

Author: karlnaden

.github/workflows/ruby.yml

@@ -11,7 +11,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        ruby-version: ['3.0', '3.1', '3.2']
+        ruby-version: ['3.2', '3.3']
 
     steps:
     - uses: actions/checkout@v2

.rubocop.yml

@@ -27,6 +27,8 @@ Style/HashTransformKeys:
   Enabled: true
 Style/HashTransformValues:
   Enabled: true
+Style/AccessModifierDeclarations:
+  Enabled: false
 Style/ModuleFunction:
   Enabled: false
 Style/SymbolArray:

.ruby-version

@@ -1 +1 @@
-3.1.2
+3.3.6

.tool-versions

@@ -1 +1 @@
-ruby 3.1.2
+ruby 3.3.6

Gemfile

@@ -5,6 +5,8 @@ gemspec
 
 group :development, :test do
   gem 'debug'
+  gem 'parallel', '1.26.3'
   gem 'pry'
   gem 'pry-byebug'
+  gem 'rubocop', '~> 1.86', require: false
 end

Gemfile.lock

@@ -5,34 +5,39 @@ PATH
       bcp47 (>= 0.3)
       date_time_precision (>= 0.8)
       mime-types (>= 3.0)
-      nokogiri (>= 1.11.4)
+      nokogiri (>= 1.19.1)
 
 GEM
   remote: https://rubygems.org/
   specs:
-    ast (2.4.2)
+    ast (2.4.3)
     bcp47 (0.3.3)
       i18n
-    byebug (11.1.3)
+    byebug (13.0.0)
+      reline (>= 0.6.0)
     coderay (1.1.3)
-    concurrent-ruby (1.3.1)
+    concurrent-ruby (1.3.6)
     coolline (0.5.0)
       unicode_utils (~> 1.4)
+    date (3.5.1)
     date_time_precision (0.8.1)
-    debug (1.9.2)
+    debug (1.11.1)
       irb (~> 1.10)
       reline (>= 0.3.8)
-    diff-lcs (1.4.4)
-    docile (1.3.2)
-    ffi (1.13.1)
-    formatador (0.2.5)
-    guard (2.16.2)
+    diff-lcs (1.6.2)
+    docile (1.4.1)
+    erb (6.0.3)
+    ffi (1.17.4)
+    formatador (1.2.3)
+      reline
+    guard (2.20.1)
       formatador (>= 0.2.4)
       listen (>= 2.7, < 4.0)
+      logger (~> 1.6)
       lumberjack (>= 1.0.12, < 2.0)
       nenv (~> 0.1)
       notiffany (~> 0.0)
-      pry (>= 0.9.12)
+      pry (>= 0.13.0)
       shellany (~> 0.0)
       thor (>= 0.18.1)
     guard-compat (1.2.1)
@@ -43,98 +48,117 @@ GEM
     guard-test (2.0.8)
       guard-compat (~> 1.2)
       test-unit (~> 3.0)
-    i18n (1.14.5)
+    i18n (1.14.8)
       concurrent-ruby (~> 1.0)
-    io-console (0.7.2)
-    irb (1.13.2)
+    io-console (0.8.2)
+    irb (1.17.0)
+      pp (>= 0.6.0)
+      prism (>= 1.3.0)
       rdoc (>= 4.0.0)
       reline (>= 0.4.2)
-    json (2.3.1)
-    listen (3.3.1)
+    json (2.19.4)
+    language_server-protocol (3.17.0.5)
+    lint_roller (1.1.0)
+    listen (3.10.0)
+      logger
       rb-fsevent (~> 0.10, >= 0.10.3)
       rb-inotify (~> 0.9, >= 0.9.10)
-    lumberjack (1.2.8)
-    method_source (1.0.0)
-    mime-types (3.5.2)
-      mime-types-data (~> 3.2015)
-    mime-types-data (3.2024.0702)
-    mini_portile2 (2.8.6)
+    logger (1.7.0)
+    lumberjack (1.4.2)
+    method_source (1.1.0)
+    mime-types (3.7.0)
+      logger
+      mime-types-data (~> 3.2025, >= 3.2025.0507)
+    mime-types-data (3.2026.0414)
+    mini_portile2 (2.8.9)
     nenv (0.3.0)
-    nokogiri (1.16.5)
+    nokogiri (1.19.2)
       mini_portile2 (~> 2.8.2)
       racc (~> 1.4)
-    nokogiri-diff (0.2.0)
+    nokogiri-diff (0.3.0)
       nokogiri (~> 1.5)
-      tdiff (~> 0.3, >= 0.3.2)
+      tdiff (~> 0.4)
     notiffany (0.1.3)
       nenv (~> 0.1)
       shellany (~> 0.0)
-    parallel (1.23.0)
-    parser (3.2.2.4)
+    parallel (1.26.3)
+    parser (3.3.11.1)
       ast (~> 2.4.1)
       racc
-    power_assert (1.2.0)
-    pry (0.14.2)
+    power_assert (3.0.1)
+    pp (0.6.3)
+      prettyprint
+    prettyprint (0.2.0)
+    prism (1.9.0)
+    pry (0.16.0)
       coderay (~> 1.1)
       method_source (~> 1.0)
-    pry-byebug (3.10.1)
-      byebug (~> 11.0)
-      pry (>= 0.13, < 0.15)
-    pry-coolline (0.2.5)
+      reline (>= 0.6.0)
+    pry-byebug (3.12.0)
+      byebug (~> 13.0)
+      pry (>= 0.13, < 0.17)
+    pry-coolline (0.2.6)
       coolline (~> 0.5)
-    psych (5.1.2)
+      pry (~> 0.13)
+    psych (5.3.1)
+      date
       stringio
-    racc (1.8.0)
+    racc (1.8.1)
     rainbow (3.1.1)
-    rake (13.0.1)
-    rb-fsevent (0.10.4)
-    rb-inotify (0.10.1)
+    rake (13.4.2)
+    rb-fsevent (0.11.2)
+    rb-inotify (0.11.1)
       ffi (~> 1.0)
-    rdoc (6.7.0)
+    rdoc (7.2.0)
+      erb
       psych (>= 4.0.0)
-    regexp_parser (2.8.2)
-    reline (0.5.9)
+      tsort
+    regexp_parser (2.12.0)
+    reline (0.6.3)
       io-console (~> 0.5)
-    rexml (3.2.8)
-      strscan (>= 3.0.9)
-    rspec (3.10.0)
-      rspec-core (~> 3.10.0)
-      rspec-expectations (~> 3.10.0)
-      rspec-mocks (~> 3.10.0)
-    rspec-core (3.10.0)
-      rspec-support (~> 3.10.0)
-    rspec-expectations (3.10.0)
+    rspec (3.13.2)
+      rspec-core (~> 3.13.0)
+      rspec-expectations (~> 3.13.0)
+      rspec-mocks (~> 3.13.0)
+    rspec-core (3.13.6)
+      rspec-support (~> 3.13.0)
+    rspec-expectations (3.13.5)
       diff-lcs (>= 1.2.0, < 2.0)
-      rspec-support (~> 3.10.0)
-    rspec-mocks (3.10.0)
+      rspec-support (~> 3.13.0)
+    rspec-mocks (3.13.8)
       diff-lcs (>= 1.2.0, < 2.0)
-      rspec-support (~> 3.10.0)
-    rspec-support (3.10.0)
-    rubocop (1.23.0)
-      parallel (~> 1.10)
-      parser (>= 3.0.0.0)
+      rspec-support (~> 3.13.0)
+    rspec-support (3.13.7)
+    rubocop (1.86.1)
+      json (~> 2.3)
+      language_server-protocol (~> 3.17.0.2)
+      lint_roller (~> 1.1.0)
+      parallel (>= 1.10)
+      parser (>= 3.3.0.2)
       rainbow (>= 2.2.2, < 4.0)
-      regexp_parser (>= 1.8, < 3.0)
-      rexml
-      rubocop-ast (>= 1.12.0, < 2.0)
+      regexp_parser (>= 2.9.3, < 3.0)
+      rubocop-ast (>= 1.49.0, < 2.0)
       ruby-progressbar (~> 1.7)
-      unicode-display_width (>= 1.4.0, < 3.0)
-    rubocop-ast (1.30.0)
-      parser (>= 3.2.1.0)
+      unicode-display_width (>= 2.4.0, < 4.0)
+    rubocop-ast (1.49.1)
+      parser (>= 3.3.7.2)
+      prism (~> 1.7)
     ruby-progressbar (1.13.0)
     shellany (0.0.1)
     simplecov (0.17.1)
       docile (~> 1.1)
       json (>= 1.8, < 3)
       simplecov-html (~> 0.10.0)
     simplecov-html (0.10.2)
-    stringio (3.1.1)
-    strscan (3.1.0)
-    tdiff (0.3.4)
-    test-unit (3.3.6)
+    stringio (3.2.0)
+    tdiff (0.4.0)
+    test-unit (3.7.7)
       power_assert
-    thor (1.0.1)
-    unicode-display_width (2.5.0)
+    thor (1.5.0)
+    tsort (0.2.0)
+    unicode-display_width (3.2.0)
+      unicode-emoji (~> 4.1)
+    unicode-emoji (4.2.0)
     unicode_utils (1.4.0)
 
 PLATFORMS
@@ -147,17 +171,18 @@ DEPENDENCIES
   guard-rspec
   guard-test
   nokogiri-diff
+  parallel (= 1.26.3)
   pry
   pry-byebug
   pry-coolline
   rake
   rspec
-  rubocop (= 1.23.0)
+  rubocop (~> 1.86)
   simplecov (~> 0.17.0)
   test-unit
 
 RUBY VERSION
-   ruby 3.1.2p20
+   ruby 3.3.6p108
 
 BUNDLED WITH
-   2.2.21
+   2.3.7

fhir_models.gemspec

@@ -22,7 +22,7 @@ Gem::Specification.new do |spec|
   spec.require_paths = ['lib']
 
   spec.required_ruby_version = '>= 3.0.0'
-  spec.add_dependency 'nokogiri', '>= 1.11.4'
+  spec.add_dependency 'nokogiri', '>= 1.19.1'
   spec.add_dependency 'date_time_precision', '>= 0.8'
   spec.add_dependency 'bcp47', '>= 0.3'
   spec.add_dependency 'mime-types', '>= 3.0'
@@ -35,7 +35,6 @@ Gem::Specification.new do |spec|
   spec.add_development_dependency 'rspec'
   spec.add_development_dependency 'simplecov', '~> 0.17.0'
   spec.add_development_dependency 'nokogiri-diff'
-  spec.add_development_dependency 'rubocop', '1.23.0'
   spec.add_development_dependency 'guard-rspec'
   spec.add_development_dependency 'guard-test'
 end

lib/fhir_models/bootstrap/model.rb

@@ -163,7 +163,7 @@ def validate_profile(metadata, contained = nil)
           errors.delete(typename) unless present.include?(typename)
         end
       end
-      errors.keep_if { |_k, v| (v && !v.empty?) }
+      errors.keep_if { |_k, v| v && !v.empty? }
     end
 
     # ----- validate a field -----
@@ -232,7 +232,7 @@ def validate_field(field, value, contained_here, meta, errors)
         end
         has_valid_code = false
         if meta['valid_codes']
-          meta['valid_codes'].each do |_key, codes|
+          meta['valid_codes'].each_value do |codes|
             has_valid_code = true unless (codes & the_codes).empty?
             break if has_valid_code
           end
@@ -287,7 +287,7 @@ def primitive?(datatype, value)
     def check_binding_uri(uri, value)
       valid = false
       # Strip off the |4.0.0 or |4.0.1 or |2014-03-26 or similar from the ends of URLs
-      uri&.gsub!(/\|[A-Za-z0-9.\-]*/, '')
+      uri&.gsub!(/\|[A-Za-z0-9.-]*/, '')
       valueset = versioned_fhir_module::Definitions.get_codes(uri)
 
       if ['http://hl7.org/fhir/ValueSet/mimetypes', 'http://www.rfc-editor.org/bcp/bcp13.txt'].include?(uri)
@@ -332,7 +332,7 @@ def find_extension(extension_source, method_name)
       extension_source.select do |extension|
         name = extension.url.tr('-', '_').split('/').last
         anchor = name.split('#').last
-        (method_name.to_s == name || method_name.to_s == anchor)
+        [name, anchor].include?(method_name.to_s)
       end
     end
 

lib/fhir_models/bootstrap/preprocess.rb

@@ -92,7 +92,7 @@ def self.pre_process_searchparam(hash)
 
       def self.remove_fhir_comments(hash)
         hash.delete('fhir_comments')
-        hash.each do |_key, value|
+        hash.each_value do |value|
           case value
           when Hash
             remove_fhir_comments(value)

lib/fhir_models/fhir.rb

@@ -74,7 +74,7 @@ def self.primitive?(datatype:, value:)
       !(value.to_s =~ /\A[A-Za-z0-9\-.]{1,64}\Z/).nil?
     when 'xhtml'
       fragment = Nokogiri::HTML::DocumentFragment.parse(value)
-      value.is_a?(String) && fragment.errors.size.zero?
+      value.is_a?(String) && fragment.errors.empty?
     when 'unsignedint'
       !(value.to_s =~ /\A(0|([1-9][0-9]*))\Z/).nil?
     when 'positiveint'