cwl-eval

#!/usr/bin/env python

import os
import sys
from distutils.sysconfig import get_python_lib

if __name__ == '__main__':
    # Work out the directory for the cwl scripts (in the site-packages directory)
    site_packages_dir = get_python_lib()
    cwl_dir = os.path.join(site_packages_dir, 'cwl')
    #print(cwl_dir)
    
    # If in developer mode, we can work this out from the current directory.
    current_dir = os.path.dirname(os.path.realpath(__file__))
    scripts_dir = os.path.join(current_dir, 'cwl')
    #print(scripts_dir)
    
    # Prepend the paths to the PYTHONPATH for this instance.
    sys.path.insert(0, cwl_dir)
    #sys.path.insert(0, os.path.join(cwl_dir,'cwl'))

    sys.path.insert(0, scripts_dir)
    #sys.path.insert(0, os.path.join(scripts_dir,'cwl'))
    #print(os.path.join(scripts_dir,'cwl'))
    # Now we should be able to import CWL without issue
    from cwl import cwl_eval

    # Parse the arguments, check that the files exist, and run!
    args = cwl_eval.parse_args()

    cwl_eval.check_file_exists(args.result_file)
    cwl_eval.check_file_exists(args.gain_file)
    cwl_eval.check_file_exists(args.cost_file)
    cwl_eval.check_file_exists(args.metrics_file)

    cwl_eval.main(args.result_file, args.gain_file, args.cost_file, args.metrics_file, args.bib_file,
                  args.colnames, args.residuals, args.max_gain, args.min_gain, args.max_cost, args.min_cost, args.max_depth)