jae0
diff --git a/‎R/aegis_mesh.R
+1-1 b/‎R/aegis_mesh.R
+1-1
diff --git a/‎R/aegis_parameters.r
+1-1 b/‎R/aegis_parameters.r
+1-1
diff --git a/‎R/aegis_stmv.R
+1-1 b/‎R/aegis_stmv.R
+1-1
diff --git a/‎R/planar2lonlat.r
+2 b/‎R/planar2lonlat.r
+2
diff --git a/‎README.md
-320 b/‎README.md
-320
diff --git a/‎README.md
+1 b/‎README.md
+1
diff --git a/‎inst/README.md
-5 b/‎inst/README.md
-5
diff --git a/‎vignettes/example.Rmd
-23 b/‎vignettes/example.Rmd
-23
@@ -8,7 +8,7 @@ aegis_mesh = function( pts, boundary=NULL, spbuffer=0, resolution=100, output_ty
 # fraction_cv = 1 means  ~ poisson
 
   # wrapper to tessellate (tile geometry), taking spatial points data and converting to spatial polygons data
-  #require(rgeos)
+ 
   require(sf)
   require(stars)
 
 
@@ -12,7 +12,7 @@ aegis_parameters = function( p=NULL, DS=NULL, ... ) {
   # ---------------------
   # create/update library list
   p$libs = c( p$libs, RLibrary ( "colorspace",  "fields", "geosphere", "lubridate",  "lattice",
-    "maps", "mapdata", "maptools", "parallel",  "rgdal", "rgeos",  "sp", "splancs", "GADMTools" ) )
+   "parallel", "sp", "splancs", "GADMTools" ) )
   p$libs = unique( c( p$libs, project.library ( "aegis") ) )
 
 
 
@@ -45,7 +45,7 @@ aegis_stmv = function( DS=NULL, p=NULL, year=NULL, ret="mean", varnames=NULL, co
     }
 
 
-    p$libs = c( p$libs, RLibrary ( "sp", "spdep", "rgeos", "INLA", "mgcv" ))  # standard CRAN libs -- geostatistical support
+    p$libs = c( p$libs, RLibrary ( "sp", "spdep", "INLA", "mgcv" ))  # standard CRAN libs -- geostatistical support
     p$libs = c( p$libs, RLibrary( "aegis", "bio.taxonomy", "stmv", "netmensuration" ) ) #,  ) # locally developed code
 
     if (!exists("project_name", p) ) stop("project_name is required")
 
@@ -39,6 +39,8 @@
         stop( "The proj4 CRS requires an explicit +units=km ")
       }
 
+message("FIXE ME::: deprecated libs, use sf/stars")
+
       y = rgdal::project( as.matrix(x[, input_names, with=FALSE ]), proj=crsX, inv=TRUE )
 
       # sf method is a bit too strict to use ..
 
@@ -0,0 +1 @@
+inst/scripts/README.md
Original file line number	Diff line number	Diff line change
`@@ -45,7 +45,7 @@ aegis_stmv = function( DS=NULL, p=NULL, year=NULL, ret="mean", varnames=NULL, co`
`45`	`45`	`}`
`46`	`46`
`47`	`47`
`48`		`- p$libs = c( p$libs, RLibrary ( "sp", "spdep", "rgeos", "INLA", "mgcv" )) # standard CRAN libs -- geostatistical support`
	`48`	`+ p$libs = c( p$libs, RLibrary ( "sp", "spdep", "INLA", "mgcv" )) # standard CRAN libs -- geostatistical support`
`49`	`49`	`p$libs = c( p$libs, RLibrary( "aegis", "bio.taxonomy", "stmv", "netmensuration" ) ) #, ) # locally developed code`
`50`	`50`
`51`	`51`	`if (!exists("project_name", p) ) stop("project_name is required")`
Original file line number	Diff line number	Diff line change
`@@ -39,6 +39,8 @@`
`39`	`39`	`stop( "The proj4 CRS requires an explicit +units=km ")`
`40`	`40`	`}`
`41`	`41`
	`42`	`+message("FIXE ME::: deprecated libs, use sf/stars")`
	`43`	`+`
`42`	`44`	`y = rgdal::project( as.matrix(x[, input_names, with=FALSE ]), proj=crsX, inv=TRUE )`
`43`	`45`
`44`	`46`	`# sf method is a bit too strict to use ..`