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input.geos
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GEOS-CHEM UNIT TEST SIMULATION: geosfp_4x5_tropchem
------------------------+------------------------------------------------------
%%% SIMULATION MENU %%% :
Start YYYYMMDD, HHMMSS : 20130701 000000
End YYYYMMDD, HHMMSS : 20131001 000000
Run directory : ./
Input restart file : ./restarts/initial_trac_rst.geosfp_4x5_tropchem
Make new restart file? : T
Output restart file(s) : ./restarts/trac_rst.geosfp_4x5_tropchem.YYYYMMDDhhmm
Root data directory : /as/data/geos/ExtData
=> GCAP subdir : AGRID/YYYY/MM/
=> GEOS-4 subdir : GEOS_4_v4/YYYY/MM/
=> GEOS-5 subdir : GEOS_5/YYYY/MM/
=> GEOS-FP subdir : GEOS_FP/YYYY/MM/
=> MERRA subdir : MERRA/YYYY/MM/
Dir w/ 1x1 emissions etc: /as/data/geos/ExtData/GEOS_NATIVE/
Temporary directory : ./
Unzip met fields? : F
Wait for met fields? : F
Use variable tropopause?: T
Global offsets I0, J0 : 0 0
------------------------+------------------------------------------------------
%%% TRACER MENU %%% :
Type of simulation : 3
Number of Tracers : 80
Tracer Entries -------> : TR# Name g/mole Tracer Members; () = emitted
Tracer #1 : 1 NO 30.0 (NO)
Tracer #2 : 2 O3 48.0 (O3)
Tracer #3 : 3 PAN 121.0
Tracer #4 : 4 CO 28.0 (CO)
Tracer #5 : 5 ALK4 12.0 (4C)
Tracer #6 : 6 ISOP 12.0 (5C)
Tracer #7 : 7 HNO3 63.0 (HNO3)
Tracer #8 : 8 H2O2 34.0
Tracer #9 : 9 ACET 12.0 (3C)
Tracer #10 : 10 MEK 12.0 (4C)
Tracer #11 : 11 ALD2 12.0 (2C)
Tracer #12 : 12 RCHO 58.0 (RCHO)
Tracer #13 : 13 MVK 70.0 (MVK)
Tracer #14 : 14 MACR 70.0 (MACR)
Tracer #15 : 15 PMN 147.0
Tracer #16 : 16 PPN 135.0
Tracer #17 : 17 R4N2 119.0
Tracer #18 : 18 PRPE 12.0 (3C)
Tracer #19 : 19 C3H8 12.0 (3C)
Tracer #20 : 20 CH2O 30.0 (CH2O)
Tracer #21 : 21 C2H6 12.0 (2C)
Tracer #22 : 22 N2O5 105.0
Tracer #23 : 23 HNO4 79.0
Tracer #24 : 24 MP 48.0
Tracer #25 : 25 DMS 62.0
Tracer #26 : 26 SO2 64.0 (SO2)
Tracer #27 : 27 SO4 96.0 (SO4)
Tracer #28 : 28 SO4s 96.0
Tracer #29 : 29 MSA 96.0
Tracer #30 : 30 NH3 17.0
Tracer #31 : 31 NH4 18.0
Tracer #32 : 32 NIT 62.0
Tracer #33 : 33 NITs 62.0
Tracer #34 : 34 BCPI 12.0
Tracer #35 : 35 OCPI 12.0
Tracer #36 : 36 BCPO 12.0
Tracer #37 : 37 OCPO 12.0
Tracer #38 : 38 DST1 29.0
Tracer #39 : 39 DST2 29.0
Tracer #40 : 40 DST3 29.0
Tracer #41 : 41 DST4 29.0
Tracer #42 : 42 SALA 31.4
Tracer #43 : 43 SALC 31.4
Tracer #44 : 44 Br2 160.0 (Br2)
Tracer #45 : 45 Br 80.0
Tracer #46 : 46 BrO 96.0
Tracer #47 : 47 HOBr 97.0
Tracer #48 : 48 HBr 81.0
Tracer #49 : 49 BrNO2 126.0
Tracer #50 : 50 BrNO3 142.0
Tracer #51 : 51 CHBr3 253.0 (CHBr3)
Tracer #52 : 52 CH2Br2 174.0 (CH2Br2)
Tracer #53 : 53 CH3Br 95.0
Tracer #54 : 54 MPN 93.0
Tracer #55 : 55 ISOPN 147.0 ISOPND ISOPNB
Tracer #56 : 56 MOBA 114.0
Tracer #57 : 57 PROPNN 119.0 PROPNN
Tracer #58 : 58 HAC 74.0 (HAC)
Tracer #59 : 59 GLYC 60.0 (GLYC)
Tracer #60 : 60 MMN 149.0 MVKN MACRN
Tracer #61 : 61 RIP 118.0
Tracer #62 : 62 IEPOX 118.0
Tracer #63 : 63 MAP 76.0
Tracer #64 : 64 NO2 46.0 (NO2)
Tracer #65 : 65 NO3 62.0
Tracer #66 : 66 HNO2 47.0
Tracer #67 : 67 MGLY 72.0
Tracer #68 : 68 GLYX 58.0
Tracer #69 : 69 HCOOH 46.0
Tracer #70 : 70 ACTA 60.0
Tracer #71 : 71 HPALD 12.0 (5C)
Tracer #72 : 72 ISN1 147.0
Tracer #73 : 73 ETHLN 105.0
Tracer #74 : 74 DHDN 226.0
Tracer #75 : 75 API 12.0 (10C)
Tracer #76 : 76 LIM 12.0 (10C)
Tracer #77 : 77 MONIT 215.0 MONITS MONITU
Tracer #78 : 78 HONIT 215.0
Tracer #79 : 79 ONITAam 14.0
Tracer #80 : 80 ONITApm 14.0
------------------------+------------------------------------------------------
%%% TRANSPORT MENU %%% :
Turn on Transport : T
=> Fill Negative Values: T
=> IORD, JORD, KORD : 3 3 7
Transport Timestep [min]: 30
------------------------+------------------------------------------------------
%%% CONVECTION MENU %%% :
Turn on Cloud Conv? : T
Turn on PBL Mixing? : T
=> Use non-local PBL? : T
Convect Timestep (min) : 30
------------------------+------------------------------------------------------
%%% EMISSIONS MENU %%% :
Turn on emissions? : T
Emiss timestep (min) : 60
HEMCO Input file : HEMCO_Config.rc
=> 1ppt MBL BRO Sim.? : F
Switches for UCX :---
=> Use CH4 emissions? : F
=> Turn on surface BCs :---
=> CH4? : F
=> OCS? : F
=> CFCs? : F
=> Cl species? : F
=> Br species? : F
=> N2O? : F
=> Set initial glob MRs:---
=> strat. H2O? : F
=> CH4? : F
=> OCS? : F
=> CFCs? : F
=> Cl species? : F
=> strat Bry (GCCM)?: F
=> Br species? : F
=> strat. Br? : F
=> strat. NOx/HNO3? : F
=> N2O? : F
=> strat. SO4? : F
=> CFC emission year : 0
------------------------+------------------------------------------------------
%%% AEROSOL MENU %%% :
Online SULFATE AEROSOLS : T
Online CRYST/AQ AEROSOLS: F
Online CARBON AEROSOLS : T
Online 2dy ORG AEROSOLS : F
=> Semivolatile POA? : F
Online DUST AEROSOLS : T
Online SEASALT AEROSOLS : T
=> SALA radius bin [um]: 0.01 0.5
=> SALC radius bin [um]: 0.5 8.0
Online dicarb. chem. : F
Settle strat. aerosols : F
Online PSC AEROSOLS : F
Allow homogeneous NAT? : F
NAT supercooling req.(K): 3.0
Ice supersaturation req.: 1.2
Perform PSC het. chem.? : F
Calc. strat. aero. OD? : F
------------------------+------------------------------------------------------
%%% DEPOSITION MENU %%% :
Turn on Dry Deposition? : T
Turn on Wet Deposition? : T
------------------------+------------------------------------------------------
%%% CHEMISTRY MENU %%% :
Turn on Chemistry? : T
Use linear. strat. chem?: T
=> Use Linoz for O3? : T
Use UCX strat. chem? : F
Online CH4 chemistry? : F
Active strat. H2O? : F
Chemistry Timestep [min]: 60
Read and save CSPEC_FULL: T
=> CSPEC rst filename? : ./restarts/spec_rst.geosfp_4x5_tropchem.YYYYMMDDhh
USE solver coded by KPP : F
Online O3 for FAST-JX? : T
Gamma HO2 : 0.2
------------------------+------------------------------------------------------
%%% RADIATION MENU %%% :
AOD Wavelength (nm) : 550
Turn on RRTMG? : F
Calculate LW fluxes? : F
Calculate SW fluxes? : F
Clear-sky flux? : F
All-sky flux? : F
Radiation Timestep [min]: 180
Species fluxes : 0 0 0 0 0 0 0 0 0 1
---[O3,ME,SU,NI,AM,BC,OA,SS,DU,PM]
------------------------+------------------------------------------------------
%%% OUTPUT MENU %%% : 123456789.123456789.123456789.1--1=ZERO+2=BPCH
Schedule output for JAN : 3000000000000000000000000000000
Schedule output for FEB : 30000000000000000000000000000
Schedule output for MAR : 3000000000000000000000000000000
Schedule output for APR : 300000000000000000000000000000
Schedule output for MAY : 3000000000000000000000000000000
Schedule output for JUN : 300000000000000000000000000000
Schedule output for JUL : 3000000000000000000000000000000
Schedule output for AUG : 3000000000000000000000000000000
Schedule output for SEP : 300000000000000000000000000000
Schedule output for OCT : 3000000000000000000000000000000
Schedule output for NOV : 300000000000000000000000000000
Schedule output for DEC : 3000000000000000000000000000000
------------------------+------------------------------------------------------
%%% GAMAP MENU %%% :
diaginfo.dat path : diaginfo.dat
tracerinfo.dat path : tracerinfo.dat
------------------------+------------------------------------------------------
%%% DIAGNOSTIC MENU %%% :
Binary punch file name : ./bpch/trac_avg.geosfp_4x5_tropchem.YYYYMMDDhhmm
Diagnostic Entries ---> : L Tracers to print out for each diagnostic
ND01: Rn/Pb/Be source : 0 all
ND02: Rn/Pb/Be decay : 0 all
ND03: Hg emissions, P/L : 0 all
ND04: CO2 Sources : 0 all
ND05: Sulfate prod/loss : 47 all
ND06: Dust aer source : 1 all
ND07: Carbon aer source : 47 all
ND08: Seasalt aer source: 1 all
ND09: - : 0 all
ND10: - : 0 all
ND11: Acetone sources : 1 all
ND12: BL fraction : 0 all
ND13: Sulfur sources : 47 all
ND14: Cld conv mass flx : 0 all
ND15: BL mix mass flx : 0 all
ND16: LS/Conv prec frac : 0 all
ND17: Rainout fraction : 0 all
ND18: Washout fraction : 0 all
ND19: CH4 loss : 0 all
ND21: Optical depths : 47 all
ND22: J-Values : 47 1 2 7 8 9 11 13 14 20 44 46 47 49 50 51 58 59 64 65
=> JV time range : 11 13
ND24: E/W transpt flx : 0 all
ND25: N/S transpt flx : 0 all
ND26: U/D transpt flx : 0 all
ND27: Strat NOx,Ox,HNO3 : 0 1 2 7
ND28: Biomass emissions : 1 1 4 5 9 10 11 18 19 20 21 26 30 34 35
ND29: CO sources : 1 all
ND30: Land Map : 0 all
ND31: Surface pressure : 0 all
ND32: NOx sources : 1 all
ND33: Column tracer : 0 all
ND34: Biofuel emissions : 1 1 4 5 9 10 11 18 19 20 21
ND35: Tracers at 500 mb : 0 all
ND36: Anthro emissions : 6 1 2 4 5 7 9 10 11 18 19 20 21 27 36 37 64 66
ND37: Updraft scav frac : 47 all
ND38: Cld Conv scav loss: 47 all
ND39: Wetdep scav loss : 47 all
ND41: Afternoon PBL ht : 0 all
ND42: SOA concentrations: 0 all
ND43: Chem prod OH, HO2 : 47 all
==> OH/HO2 time range : 0 24
ND44: Drydep flx/vel : 1 2 3 7 8 9 11 13 14 15 16 17 20 22 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 47 48 50 55 57 58 59 60 61 62 63 64
ND45: Tracer Conc's : 47 all
==> ND45 Time range : 0 24
ND46: Biogenic emissions: 1 all
ND47: 24-h avg trc conc : 0 all
ND52: GAMMA HO2 : 0 all
ND53: POPs Emissions : 0 all
ND54: Time in t'sphere : 47 all
ND55: Tropopause height : 47 all
ND56: Lightning flashes : 47 all
ND57: Potential T : 47 all
ND58: CH4 Emissions : 0 all
ND59: TOMAS aerosol emis: 0 all
ND60: Wetland Frac : 0 all
ND61: TOMAS 3D rate : 0 all
ND62: Inst column maps : 0 all
ND64: Radiative flux : 0 all
ND66: DAO 3-D fields : 47 all
ND67: DAO 2-D fields : 47 all
ND68: Airmass/Boxheight : 47 all
ND69: Surface area : 1 all
ND70: Debug output : 0 all
ND71: Hourly max ppbv : 0 2
ND72: Radiative output : 0 all
------------------------+------------------------------------------------------
%%% PLANEFLIGHT MENU %%%:
Turn on plane flt diag? : T
Flight track info file : ./plane/Planeflight.dat.YYYYMMDD
Output file name : ./plane/plane.log.YYYYMMDD
------------------------+------------------------------------------------------
%%% ND48 MENU %%% :
Turn on ND48 stations : F
Station Timeseries file : stations.YYYYMMDD
Frequency [min] : 60
Number of stations : 19
Station #1 (I,J,Lmax,N) : 20 32 15 1
Station #2 (I,J,Lmax,N) : 20 32 15 6
Station #3 (I,J,Lmax,N) : 20 32 15 7
Station #4 (I,J,Lmax,N) : 20 32 15 13
Station #5 (I,J,Lmax,N) : 20 32 15 14
Station #6 (I,J,Lmax,N) : 20 32 15 17
Station #7 (I,J,Lmax,N) : 20 32 15 20
Station #8 (I,J,Lmax,N) : 20 32 15 55
Station #9 (I,J,Lmax,N) : 20 32 15 60
Station #10(I,J,Lmax,N) : 20 32 15 61
Station #11(I,J,Lmax,N) : 20 32 15 62
Station #12(I,J,Lmax,N) : 20 32 15 64
Station #13(I,J,Lmax,N) : 20 32 15 65
Station #14(I,J,Lmax,N) : 20 32 15 67
Station #15(I,J,Lmax,N) : 20 32 15 95
Station #16(I,J,Lmax,N) : 20 32 15 100
Station #17(I,J,Lmax,N) : 20 32 15 106
Station #18(I,J,Lmax,N) : 20 32 15 108
Station #19(I,J,Lmax,N) : 20 32 15 109
------------------------+------------------------------------------------------
%%% ND49 MENU %%% :
Turn on ND49 diagnostic : T
Inst 3-D timeser. file : ./timeseries/tsYYYYMMDD.bpch
Tracers to include : 1 2 4 6 13 20 26 27 31 32 35 64 66 79 80 81 99 159 160 161 162
Frequency [min] : 60
IMIN, IMAX of region : 1 72
JMIN, JMAX of region : 1 46
LMIN, LMAX of region : 1 47
-------------------------------------------------------------------------------
%%% ND50 MENU %%% :
Turn on ND50 diagnostic : F
24-hr avg timeser. file : ts_24h_avg.YYYYMMDD.bpch
Output as HDF5? : F
Tracers to include : 82 83 84 85 86 87
IMIN, IMAX of region : 1 72
JMIN, JMAX of region : 1 46
LMIN, LMAX of region : 1 1
-------------------------------------------------------------------------------
%%% ND51 MENU %%% :
Turn on ND51 diagnostic : T
LT avg timeseries file : ./satellite/ts_satellite_13_14.YYYYMMDD.bpch
Output as HDF : F
Tracers to include : 1 2 4 6 20 30 64 80 95 96 97 98 99 100 105 107 110 111 112
GMT Hour for disk write : 0
Avg Period [LT hours] : 13 14
IMIN, IMAX of region : 1 72
JMIN, JMAX of region : 1 46
LMIN, LMAX of region : 1 47
-------------------------------------------------------------------------------
%%% ND51b MENU %%% :
Turn on ND51b diagnstic : F
LT avg timeseries file : ts_13_15.NA.YYYYMMDD.h5
Output as HDF5? : F
Tracers to include : 1 4 20 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 60 61 62 63 64 65 66 72 73 75 82 83 84 85 86 87 93 94 98 99
GMT Hour for disk write : 1
Avg Period [LT hours] : 13 15
IMIN, IMAX of region : 1 72
JMIN, JMAX of region : 1 46
LMIN, LMAX of region : 1 1
------------------------+------------------------------------------------------
%%% ND63 MENU %%% :
Turn on ND63 diagnostic : F
Inst 3-D timeser. file : paranox_ts.YYYYMMDD.bpch
Tracers to include : 1
Frequency [min] : 120
IMIN, IMAX of region : 70 30
JMIN, JMAX of region : 23 46
-------------------------------------------------------------------------------
%%% PROD & LOSS MENU %%%:
Turn on P/L (ND65) diag?: T
# of levels for ND65 : 38
Save O3 P/L (ND20)? : T
Number of P/L families : 17
1st chemical family : POX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 BrO HOBr BrNO2 2BrNO3 MPN
2nd chemical family : LOX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 BrO HOBr BrNO2 2BrNO3 MPN
3rd chemical family : PNOx: NO NO2
4th chemical family : LNOx: NO NO2
5th chemical family : LANs: ISOPNB ISOPND MVKN MACRN PROPNN ETHLN DHDN R4N2 ISN1
6th chemical family : PANs: ISOPNB ISOPND MVKN MACRN PROPNN ETHLN DHDN R4N2 ISN1
7th chemical family : LIN1: ISOPNB ISOPND
8th chemical family : PIN1: ISOPNB ISOPND
9th chemical family : LIN2: MVKN MACRN PROPNN ETHLN DHDN R4N2 ISN1
10th chemical family : PIN2: MVKN MACRN PROPNN ETHLN DHDN R4N2 ISN1
11th chemical family : LMTN1: MONITU MONITS
12th chemical family : PMTN1: MONITU MONITS
13th chemical family : LMTN2: HONIT
14th chemical family : PMTN2: HONIT
15th chemical family : PXRIO2NO: XRIO2NO
16th chemical family : PXRIO2HO2: XRIO2HO2
17th chemical family : PXRIO2OTHER: XRIO2OTHER
------------------------+------------------------------------------------------
%%% ARCHIVED OH MENU %%%:
Dir w/ archived OH files: /as/data/geos/GEOS_MEAN/OHmerge/v5-07-08/
------------------------+------------------------------------------------------
%%% O3 P/L MENU %%% :
Dir w/ O3 P/L rate files: ./O3_PROD_LOSS/
------------------------+------------------------------------------------------
%%% BENCHMARK MENU %%% :
Save benchmark output? : F
File w/ initial Ox : Ox.mass.initial
File w/ final Ox : Ox.mass.final
------------------------+------------------------------------------------------
%%% NESTED GRID MENU %%%:
Save TPCORE BC's : F
Input BCs at 2x2.5? : F
Over North America? : F
TPCORE NA BC directory : BC_4x5_NA/
Over Europe? : F
TPCORE EU BC directory : BC_4x5_EU/
Over China? : F
TPCORE CH BC directory : BC_4x5_CH/
Over SE Asia region? : F
TPCORE SE BC directory : BC_4x5_SE/
Over Custom Region? : F
TPCORE BC directory : BC_4x5/
BC timestep [min] : 180
LL box of BC region : 9 26
UR box of BC region : 29 41
I0_W, J0_W, I0_E, J0_E : 3 3 3 3
------------------------+------------------------------------------------------
%%% UNIX CMDS MENU %%% :
Background symbol : &
Redirect symbol : >
Unix remove command : rm -f
Unix pathname separator : /
Unix wildcard character : *
Unix unzip command : gzip -dc
Zip file suffix : .gz
------------------------+------------------------------------------------------
END OF FILE :
------------------------+------------------------------------------------------