This section contains sample scripts to analyze data from different applications. You can find application notes for all these segments here.
For all of the examples, it is assumed that the following lines precede any other code:
import numpy as np import matplotlib.pyplot as plt import lumicks.pylake as lk
.. toctree::
:caption: Segments
:numbered:
:maxdepth: 1
cst/index
dna_rna_protein/index
twlc_fitting/twlc_fitting
reca_fitting/reca_fitting
cas9_kymotracking/cas9_kymotracking
hairpin_fitting/hairpin_unfolding
bead_coupling/coupling
kymo_markers/kymo_markers