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BSD 3-Clause License
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- Copyright (c) 2020 , macs3 project team All rights reserved.
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+ Copyright (c) 2024 , macs3 project team All rights reserved.
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Redistribution and use in source and binary forms, with or without
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modification, are permitted provided that the following conditions are met:
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MACS_VERSION = "3.0.2"
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MAX_PAIRNUM = 1000
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- MAX_LAMBDA = 100000
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- FESTEP = 20
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- BUFFER_SIZE = 100000 # np array will increase at step of 1 million items
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- READ_BUFFER_SIZE = 10000000 # 10M bytes for read buffer size
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- N_MP = 2 # Number of processers
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+ MAX_LAMBDA = 100000
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+ FESTEP = 20
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+ BUFFER_SIZE = 100000 # np array will increase at step of 1 million items
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+ READ_BUFFER_SIZE = 10000000 # 10M bytes for read buffer size
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+ N_MP = 2 # Number of processers
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- #Effective genome size, collected from
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- #https://deeptools.readthedocs.io/en/develop/content/feature/effectiveGenomeSize.html
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-
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- EFFECTIVEGS = {"hs" :2913022398 , #GRCh38
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- "mm" :2652783500 , #GRCm38
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- "ce" :100286401 , #WBcel235
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- "dm" :142573017 } #dm6
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+ # Effective genome size, collected from
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+ # https://deeptools.readthedocs.io/en/develop/content/feature/effectiveGenomeSize.html
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+ EFFECTIVEGS = {"hs" : 2913022398 , # GRCh38
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+ "mm" : 2652783500 , # GRCm38
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+ "ce" : 100286401 , # WBcel235
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+ "dm" : 142573017 } # dm6
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